Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 9.9e-111 403.7 236 100.0
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 4.3e-74 282.0 240 66.7
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 8.2e-73 277.7 234 64.5
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 1.6e-68 263.5 233 62.2
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 3.6e-68 262.3 232 61.2
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 4.7e-68 261.9 231 64.5
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 6.1e-68 261.5 231 72.3
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 5.1e-67 258.5 233 65.7
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 5.1e-67 258.5 242 64.0
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 6.7e-67 258.1 229 66.8
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 1.5e-66 256.9 233 70.4
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 8.2e-65 251.1 240 61.2
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 1.8e-64 250.0 235 63.4
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 2.4e-64 249.6 237 65.0
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 3.1e-64 249.2 235 63.0
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 5.3e-64 248.4 232 67.2
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 3.5e-63 245.7 235 63.0
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 7.7e-63 244.6 239 60.3
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 2.2e-62 243.0 235 63.0
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 5.0e-62 241.9 235 62.6
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 1.9e-61 240.0 238 61.3
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 3.2e-61 239.2 230 62.2
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 1.6e-60 236.9 239 59.8
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 4.7e-60 235.3 235 58.7
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.4e-59 233.8 232 58.2
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 3.0e-59 232.6 230 60.9
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 3.0e-59 232.6 235 57.4
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 5.2e-59 231.9 230 59.6
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 1.1e-58 230.7 230 60.9
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 1.7e-57 226.9 238 60.1
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 2.8e-57 226.1 238 60.1
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 6.3e-57 224.9 238 58.8
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 8.2e-57 224.6 232 61.6
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.8e-56 223.4 236 58.5
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 2.6e-55 219.5 243 65.0
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 3.5e-55 219.2 244 65.2
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 3.5e-55 219.2 230 58.7
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 4.5e-55 218.8 238 57.6
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 1.7e-54 216.9 230 58.7
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 2.2e-54 216.5 235 56.2
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 2.9e-54 216.1 238 56.7
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 3.8e-54 215.7 216 56.9
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 6.5e-54 214.9 227 59.0
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 2.5e-53 213.0 234 54.3
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 5.5e-53 211.8 241 57.3
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 2.1e-52 209.9 216 55.6
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 2.7e-52 209.5 238 57.6
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 2.7e-52 209.5 217 59.4
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 4.7e-52 208.8 262 55.3
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 6.1e-52 208.4 234 56.0
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 4.0e-51 205.7 234 57.3
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 8.8e-51 204.5 241 51.9
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 8.8e-51 204.5 158 75.9
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 6.3e-49 198.4 232 51.3
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 2.4e-48 196.4 242 52.9
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 2.0e-47 193.4 242 59.1
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 3.5e-47 192.6 235 53.2
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 5.9e-47 191.8 237 54.9
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 1.7e-46 190.3 230 54.8
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 1.5e-45 187.2 222 52.7
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 1.5e-45 187.2 176 57.4
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 1.5e-45 187.2 233 50.6
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 1.9e-45 186.8 247 47.8
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 3.2e-45 186.0 261 47.5
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 3.2e-45 186.0 181 59.7
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 4.2e-45 185.7 259 47.9
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 7.2e-45 184.9 262 46.2
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 1.6e-44 183.7 262 46.2
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.7e-44 183.0 233 56.7
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 3.6e-44 182.6 192 61.5
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 3.6e-44 182.6 221 52.0
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 6.1e-44 181.8 233 51.5
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 1.4e-43 180.6 246 50.8
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 1.8e-43 180.3 256 46.9
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 1.8e-43 180.3 256 46.9
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 3.0e-43 179.5 261 46.7
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 8.8e-43 177.9 233 53.2
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 8.8e-43 177.9 247 49.4
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 2.0e-42 176.8 216 56.0
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 4.4e-42 175.6 256 46.5
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 4.4e-42 175.6 256 46.5
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 4.4e-42 175.6 194 58.8
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 9.8e-42 174.5 180 53.9
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 1.3e-41 174.1 244 54.9
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 1.3e-41 174.1 231 56.3
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 1.7e-41 173.7 258 46.9
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 1.7e-41 173.7 258 46.9
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 1.7e-41 173.7 258 46.9
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 6.3e-41 171.8 231 56.7
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 4.1e-40 169.1 249 46.2
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 3.5e-39 166.0 233 54.1
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 7.7e-39 164.9 261 45.2
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 1.0e-38 164.5 179 54.7
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 5.6e-37 158.7 238 47.1
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 5.6e-37 158.7 226 47.8
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 1.8e-35 153.7 253 45.8
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 1.2e-34 151.0 238 53.4
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 1.3e-33 147.5 244 43.0
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 3.7e-33 146.0 161 52.8
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.7e-31 139.8 190 48.4
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 1.3e-30 137.5 230 42.6
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.5e-29 133.3 208 40.9
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 7.8e-23 111.7 253 35.2
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 1.7e-22 110.5 172 45.9
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 3.0e-22 109.8 222 37.4
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.1e-20 103.6 109 62.4
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 4.0e-19 99.4 110 52.7
Actinidia05202 Actinidia chinensis HOM05D006466 ORTHO05D008084 1.7e-17 94.0 95 55.8
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 4.9e-17 92.4 65 70.8
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 1.1e-16 91.3 115 55.7
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 1.6e-15 87.4 54 79.6
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 4.6e-15 85.9 175 43.4
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 1.0e-14 84.7 51 80.4
BcaC04g19403 Brassica carinata HOM05D006466 ORTHO05D008084 9.5e-13 78.2 149 37.6
BolC9t58475H Brassica oleracea HOM05D006466 ORTHO05D008084 9.5e-13 78.2 149 37.6
BcaC01g01648 Brassica carinata HOM05D006466 ORTHO05D008084 3.5e-07 59.7 95 40.0
C03p73400 Brassica napus HOM05D006466 ORTHO05D008084 4.6e-07 59.3 107 36.4
BraA04t17310Z Brassica rapa HOM05D006466 ORTHO05D008084 7.8e-07 58.5 96 35.4
Cre06.g300200 Chlamydomonas reinhardtii HOM05D006466 ORTHO05D008084 2.3e-06 57.0 189 32.3
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 3.9e-06 56.2 56 55.4
C09p56080 Brassica napus HOM05D006466 ORTHO05D008084 6.6e-06 55.5 96 34.4


User provided reference genes

Program Settings