Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 6.2e-91 337.4 169 100.0
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 6.8e-45 184.5 136 72.8
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 7.5e-44 181.0 136 69.1
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 2.2e-43 179.5 138 69.6
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 3.1e-42 175.6 136 68.4
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 3.8e-40 168.7 138 65.2
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.5e-39 166.8 136 64.7
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.5e-39 166.8 138 64.5
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 3.3e-39 165.6 137 62.8
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 4.0e-37 158.7 148 60.8
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 5.2e-37 158.3 203 49.8
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.5e-36 156.8 140 63.6
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 2.0e-36 156.4 135 60.0
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.6e-36 156.0 138 60.9
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.4e-36 155.6 106 78.3
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 4.4e-36 155.2 135 64.4
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 5.7e-36 154.8 138 61.6
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 5.7e-36 154.8 135 60.0
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 5.7e-36 154.8 138 64.5
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 9.8e-36 154.1 137 61.3
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.8e-35 152.5 141 61.0
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 2.8e-35 152.5 140 64.3
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 2.8e-35 152.5 137 59.9
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 2.8e-35 152.5 138 63.0
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 2.8e-35 152.5 138 62.3
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 3.7e-35 152.1 138 62.3
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.7e-35 152.1 136 63.2
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 4.9e-35 151.8 139 60.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 6.3e-35 151.4 137 62.8
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 6.3e-35 151.4 136 63.2
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.1e-34 150.6 138 58.7
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.1e-34 150.6 146 59.6
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.4e-34 150.2 138 60.1
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.4e-34 150.2 138 60.1
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 2.4e-34 149.4 138 61.6
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.4e-34 149.4 142 60.6
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 5.4e-34 148.3 137 61.3
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.2e-33 147.1 143 56.6
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.6e-33 146.7 138 61.6
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 2.0e-33 146.4 136 60.3
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.0e-33 146.4 135 60.0
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 2.7e-33 146.0 138 60.1
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.7e-33 146.0 140 58.6
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 2.7e-33 146.0 137 57.7
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.5e-33 145.2 135 59.3
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.9e-33 144.8 138 56.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 5.9e-33 144.8 137 59.9
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 7.8e-33 144.4 144 58.3
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.0e-32 144.1 139 60.4
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.7e-32 143.3 138 59.4
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 2.3e-32 142.9 135 57.8
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 2.3e-32 142.9 138 58.0
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 5.0e-32 141.7 136 60.3
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 6.6e-32 141.4 136 58.8
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 6.6e-32 141.4 135 57.8
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 8.6e-32 141.0 136 59.6
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 8.6e-32 141.0 136 59.6
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 1.1e-31 140.6 136 58.8
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.5e-31 140.2 138 57.2
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.5e-31 140.2 136 58.8
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.5e-31 140.2 138 58.0
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.5e-31 140.2 139 57.6
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 1.9e-31 139.8 136 58.8
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 1.9e-31 139.8 136 58.8
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.5e-31 139.4 137 58.4
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.3e-31 139.0 136 56.6
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 9.5e-31 137.5 137 55.5
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.2e-30 137.1 136 59.6
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.2e-30 137.1 131 58.8
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.6e-30 136.7 145 53.8
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 1.6e-30 136.7 136 59.6
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.1e-30 136.3 145 53.8
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.1e-30 136.3 136 55.1
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 2.8e-30 136.0 141 54.6
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 4.7e-30 135.2 142 54.9
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.1e-30 134.8 137 57.7
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 6.1e-30 134.8 134 58.2
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 8.0e-30 134.4 138 55.8
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.0e-29 134.0 137 56.9
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.0e-29 134.0 136 56.6
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 2.3e-29 132.9 135 55.6
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.3e-29 132.9 137 56.9
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 3.1e-29 132.5 150 54.7
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 5.2e-29 131.7 135 57.0
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 6.8e-29 131.3 137 55.5
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 8.9e-29 131.0 136 55.9
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.6e-28 129.4 130 55.4
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.3e-27 127.1 136 54.4
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.3e-27 127.1 143 52.4
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.4e-27 124.8 132 54.5
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 6.4e-27 124.8 137 51.1
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 1.9e-26 123.2 157 49.7
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 4.1e-26 122.1 122 55.7
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 9.2e-26 120.9 133 52.6
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 9.2e-26 120.9 84 70.2
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 6.0e-25 118.2 107 62.6
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 1.7e-24 116.7 78 71.8
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 2.3e-24 116.3 87 66.7
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 5.0e-24 115.2 133 51.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.6e-22 109.0 77 62.3
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 8.0e-22 107.8 106 60.4
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 8.0e-22 107.8 141 50.4
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 5.2e-21 105.1 77 68.8
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.6e-17 93.6 57 77.2
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 2.7e-17 92.8 86 55.8
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 7.8e-17 91.3 105 55.2
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.0e-16 90.9 119 47.1
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 1.3e-16 90.5 85 55.3
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 2.3e-16 89.7 105 54.3
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 3.1e-13 79.3 106 50.0
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 8.9e-13 77.8 105 49.5
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.2e-12 77.4 60 55.0
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 3.4e-12 75.9 113 40.7
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 5.8e-12 75.1 90 43.3
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 1.4e-10 70.5 131 38.2
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 5.6e-07 58.5 55 56.4
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.6e-06 57.0 55 54.5


User provided reference genes

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