Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 3.9e-151 538.1 275 100.0
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.7e-117 426.4 246 87.0
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.0e-116 421.0 246 86.6
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.2e-115 420.2 247 85.8
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.0e-115 419.5 247 85.8
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.7e-115 419.1 246 86.2
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 2.7e-115 419.1 247 85.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.7e-115 419.1 246 86.2
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.5e-115 418.7 246 84.6
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 4.5e-115 418.3 240 87.1
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 4.5e-115 418.3 247 84.6
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.0e-114 417.2 246 82.9
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 3.8e-114 415.2 246 85.0
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 5.0e-114 414.8 247 85.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.5e-113 413.3 247 82.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.5e-113 413.3 247 82.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.9e-113 412.9 241 84.6
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 2.5e-113 412.5 247 83.4
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 4.2e-113 411.8 251 82.9
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 5.5e-113 411.4 246 83.7
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 5.5e-113 411.4 246 83.7
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 7.2e-113 411.0 247 81.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 7.2e-113 411.0 247 82.2
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 7.2e-113 411.0 247 82.2
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.2e-112 410.2 246 83.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.6e-112 409.8 247 82.6
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.6e-112 409.8 251 82.9
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 2.7e-112 409.1 247 82.2
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 6.1e-112 407.9 246 83.7
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.0e-111 407.1 246 81.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.8e-111 406.4 246 82.1
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 5.2e-111 404.8 247 82.2
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 5.2e-111 404.8 247 83.0
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 8.8e-111 404.1 245 81.6
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 8.8e-111 404.1 247 81.8
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.2e-110 403.7 240 84.2
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.2e-110 403.7 247 81.8
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.0e-110 402.9 247 81.8
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 2.2e-109 399.4 246 80.5
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.2e-109 399.4 247 81.0
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.2e-109 399.4 242 82.6
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 3.7e-109 398.7 247 81.8
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.1e-108 397.1 242 82.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.4e-108 396.7 246 81.3
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 2.4e-108 396.0 246 81.3
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.4e-108 396.0 246 81.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 3.1e-108 395.6 247 79.4
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 3.1e-108 395.6 247 80.2
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 5.4e-108 394.8 246 80.5
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 5.4e-108 394.8 246 79.7
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 7.0e-108 394.4 246 80.1
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 7.0e-108 394.4 247 79.4
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 9.1e-108 394.0 247 78.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 9.1e-108 394.0 247 78.9
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.2e-107 393.7 247 82.2
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 5.9e-107 391.3 247 78.9
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 7.7e-107 391.0 247 79.8
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.7e-106 389.8 240 79.6
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 2.3e-106 389.4 247 79.8
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.3e-106 389.4 246 78.5
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 6.6e-106 387.9 247 79.4
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 8.6e-106 387.5 247 78.1
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 8.6e-106 387.5 246 78.9
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.1e-105 387.1 246 78.9
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 7.2e-105 384.4 247 78.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 7.2e-105 384.4 247 77.7
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.2e-104 383.6 249 78.7
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 1.2e-104 383.6 246 78.0
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 3.6e-104 382.1 246 79.3
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.7e-104 381.7 247 78.9
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.7e-104 381.7 249 78.7
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 6.1e-104 381.3 249 78.3
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 6.1e-104 381.3 249 77.1
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 6.1e-104 381.3 249 77.1
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 8.0e-104 380.9 249 77.1
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.0e-103 380.6 248 77.8
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 2.3e-103 379.4 249 76.3
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 4.0e-103 378.6 249 76.3
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.0e-103 378.6 247 78.1
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 5.2e-103 378.3 249 75.9
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.0e-102 376.3 249 78.3
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.0e-102 376.3 241 78.4
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 4.4e-102 375.2 248 77.0
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 5.7e-102 374.8 249 77.9
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.4e-100 370.2 248 76.6
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.8e-100 369.8 257 74.7
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.8e-95 351.3 248 72.2
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 8.9e-95 350.9 241 72.6
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.7e-93 346.7 247 70.4
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-91 340.1 196 86.2
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 7.3e-89 331.3 249 68.7
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.7e-88 328.6 246 69.1
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 7.5e-86 321.2 209 75.6
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 7.5e-86 321.2 249 66.7
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 9.8e-86 320.9 208 76.4
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 4.1e-84 315.5 249 65.5
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 4.3e-81 305.4 209 75.6
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.7e-77 292.4 202 71.3
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.9e-77 292.0 247 59.9
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.9e-77 292.0 247 59.9
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.6e-75 287.0 190 74.7
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.5e-70 270.4 247 61.5
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 2.4e-68 263.1 243 57.2
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 8.1e-64 248.1 244 54.1
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.5e-57 227.3 247 54.7
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.3e-56 224.2 246 50.4
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.7e-53 213.8 258 46.1
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.4e-53 211.5 131 84.0
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.4e-52 209.9 131 84.0
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.0e-51 205.3 131 81.7
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.8e-45 186.0 131 77.1
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 2.5e-44 183.3 163 52.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.2e-44 183.0 123 74.0
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.3e-41 172.9 91 87.9
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 2.1e-40 170.2 243 41.2
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.4e-39 167.5 156 60.9
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.7e-29 134.0 247 39.7
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 9.4e-28 128.3 299 31.1
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 9.4e-28 128.3 306 29.7
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 2.1e-27 127.1 261 33.7
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 5.1e-26 122.5 246 37.4
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.1e-15 86.3 43 93.0


User provided reference genes

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