Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 1.6e-97 359.4 181 100.0
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 2.8e-81 305.4 174 89.1
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 9.7e-74 280.4 174 79.3
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 3.6e-68 261.9 175 76.6
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.8e-64 249.6 174 71.3
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.2e-63 246.9 176 69.3
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 7.7e-63 244.2 168 75.0
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.7e-62 243.0 174 71.8
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 2.9e-62 242.3 174 70.1
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 6.5e-62 241.1 174 71.3
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 1.1e-61 240.4 174 69.0
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 2.5e-61 239.2 174 67.8
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 7.2e-61 237.7 167 71.9
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 1.2e-60 236.9 174 70.7
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 8.0e-60 234.2 174 67.2
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.4e-59 233.4 174 70.1
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 1.4e-59 233.4 174 67.8
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 3.0e-59 232.3 181 68.5
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 1.2e-58 230.3 175 67.4
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 5.7e-58 228.0 175 69.1
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 1.7e-57 226.5 174 66.7
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 4.8e-57 224.9 166 67.5
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 3.1e-56 222.2 174 67.2
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 7.0e-56 221.1 178 61.8
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 7.0e-56 221.1 174 64.4
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.6e-55 219.9 175 64.6
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 2.0e-55 219.5 172 62.8
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 5.9e-55 218.0 182 65.9
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 5.9e-55 218.0 177 63.8
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 7.7e-55 217.6 175 64.0
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 7.7e-55 217.6 175 63.4
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 7.7e-55 217.6 175 64.0
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 5.0e-54 214.9 183 63.9
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 1.1e-53 213.8 175 64.0
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.5e-53 213.4 175 64.6
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.9e-53 213.0 183 63.4
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 3.2e-53 212.2 175 65.1
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 3.2e-53 212.2 174 67.2
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 4.2e-53 211.8 177 61.0
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 4.2e-53 211.8 176 60.8
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 5.5e-53 211.5 172 64.0
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 7.2e-53 211.1 175 63.4
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 7.2e-53 211.1 175 62.9
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 6.1e-52 208.0 175 61.7
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.0e-51 207.2 174 65.5
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 1.8e-51 206.5 174 61.5
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.0e-51 205.3 175 59.4
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 2.0e-50 203.0 176 61.9
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 2.0e-50 203.0 175 61.7
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 5.7e-50 201.4 174 62.1
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 9.8e-50 200.7 180 58.3
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.2e-49 199.5 175 58.3
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 2.8e-49 199.1 175 60.0
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 3.7e-49 198.7 182 59.3
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.7e-49 198.7 175 62.9
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 3.7e-49 198.7 175 62.9
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.8e-48 196.4 174 56.9
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 3.1e-48 195.7 174 56.9
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 3.1e-48 195.7 175 60.6
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 9.1e-48 194.1 177 59.3
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 1.6e-47 193.4 182 58.2
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 1.6e-47 193.4 174 59.2
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 2.7e-47 192.6 177 58.2
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 4.5e-47 191.8 173 56.6
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 4.5e-47 191.8 174 55.2
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 5.9e-47 191.4 173 56.6
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.3e-46 190.3 178 56.7
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.3e-46 190.3 178 56.7
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 2.9e-46 189.1 180 61.1
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 8.6e-46 187.6 177 54.8
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 1.5e-45 186.8 168 56.0
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.5e-45 186.8 174 59.8
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.5e-45 186.0 174 54.6
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 5.5e-45 184.9 168 56.5
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 9.5e-45 184.1 178 55.6
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 1.2e-44 183.7 173 59.0
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.6e-44 183.3 180 57.8
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 2.8e-44 182.6 174 54.6
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 4.7e-44 181.8 176 56.2
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.0e-43 180.6 177 55.4
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 1.0e-43 180.6 181 59.7
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.4e-43 180.3 177 57.1
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 1.8e-43 179.9 171 57.3
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 5.2e-43 178.3 174 54.0
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 5.2e-43 178.3 177 53.7
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 6.8e-43 177.9 174 52.9
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 1.2e-42 177.2 177 54.2
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 2.0e-42 176.4 173 56.6
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 4.4e-42 175.3 168 54.8
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 9.8e-42 174.1 173 57.8
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 4.1e-40 168.7 175 49.7
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 1.6e-39 166.8 173 54.9
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 2.7e-39 166.0 172 54.1
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 5.9e-39 164.9 172 53.5
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 1.0e-38 164.1 172 54.7
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.0e-38 164.1 174 54.0
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.0e-38 164.1 174 54.0
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.3e-38 163.7 152 56.6
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 2.5e-37 159.5 172 52.9
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 7.3e-37 157.9 110 67.3
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 2.1e-36 156.4 176 50.6
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.3e-35 152.9 180 47.8
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 2.0e-34 149.8 180 48.9
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 7.5e-34 147.9 114 67.5
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 1.3e-33 147.1 174 46.6
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 2.2e-33 146.4 178 50.0
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 2.9e-33 146.0 174 47.1
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 3.7e-33 145.6 174 46.6
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 4.9e-33 145.2 174 50.0
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 6.4e-33 144.8 174 47.7
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 4.1e-32 142.1 185 47.6
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.6e-31 140.2 178 48.9
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 7.8e-31 137.9 174 45.4
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 1.3e-30 137.1 174 44.8
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 2.3e-30 136.3 174 44.8
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 2.3e-30 136.3 174 44.8
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 3.9e-30 135.6 179 46.9
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 6.6e-30 134.8 174 44.8
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 6.6e-30 134.8 174 42.5
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 1.1e-29 134.0 178 48.9
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 1.2e-28 130.6 175 44.6
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 6.8e-27 124.8 175 42.9
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.5e-26 123.6 114 54.4
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 5.8e-26 121.7 176 44.3
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 5.8e-26 121.7 176 44.3
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 1.7e-25 120.2 176 42.6
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 1.7e-25 120.2 176 42.6
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 1.7e-25 120.2 176 42.6
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 7.0e-24 114.8 180 42.8
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 2.1e-15 86.7 189 30.7
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.4e-11 73.2 183 29.5
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 6.8e-11 71.6 111 37.8
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.6e-10 69.7 89 37.1


User provided reference genes

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