Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 0.0e+00 1217.6 617 100.0
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 2.0e-267 925.6 621 78.9
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 2.1e-192 676.4 626 61.8
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.5e-190 670.2 622 62.1
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 7.6e-187 657.9 626 58.1
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.0e-178 630.9 628 58.0
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 1.1e-174 617.5 610 59.5
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.6e-173 613.6 633 55.8
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 3.1e-164 582.8 622 53.7
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.5e-163 580.5 616 52.8
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.7e-160 569.7 619 51.9
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 2.8e-157 559.7 638 52.0
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 1.4e-156 557.4 615 50.7
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 4.1e-148 529.3 622 50.3
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 4.5e-147 525.8 615 49.8
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.7e-144 516.5 609 48.6
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 1.8e-143 513.8 615 48.3
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 3.7e-141 506.1 609 50.7
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 1.2e-139 501.1 545 51.9
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 2.7e-139 500.0 571 50.1
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.9e-139 498.8 601 48.8
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 1.3e-138 497.7 674 47.9
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 2.2e-138 496.9 578 52.6
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 4.7e-136 489.2 606 48.8
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.4e-135 487.6 596 48.0
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 2.2e-133 480.3 617 45.9
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 2.8e-133 479.9 624 45.4
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 3.7e-133 479.6 544 50.9
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.8e-132 477.2 581 49.2
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 3.5e-131 473.0 581 48.9
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 4.5e-131 472.6 581 48.9
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.0e-130 471.5 619 45.4
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.9e-130 469.9 618 46.0
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 8.6e-130 468.4 639 44.8
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.8e-128 463.4 642 44.1
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 2.8e-128 463.4 619 45.9
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 4.7e-128 462.6 620 46.0
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.4e-127 461.1 623 47.7
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.3e-127 460.3 635 45.0
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 2.6e-126 456.8 608 45.4
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 7.5e-126 455.3 702 42.9
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.3e-125 454.5 623 43.7
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-124 451.4 642 44.4
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.1e-124 451.4 624 43.1
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.2e-123 448.0 651 44.4
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 8.6e-122 441.8 624 42.9
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.8e-119 434.1 581 47.0
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 8.9e-119 431.8 630 44.1
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 2.6e-118 430.3 625 43.8
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 2.6e-118 430.3 625 42.7
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.4e-118 429.9 517 49.7
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 3.4e-118 429.9 655 43.2
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 9.8e-118 428.3 614 45.3
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 4.1e-116 422.9 618 42.6
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 5.4e-116 422.5 619 42.6
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 7.0e-116 422.2 595 44.2
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 7.8e-115 418.7 625 41.9
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 1.3e-114 417.9 631 43.7
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.0e-114 416.8 598 46.5
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.9e-114 416.4 611 41.4
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 4.3e-113 412.9 610 46.2
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.2e-110 404.8 612 42.2
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 4.4e-110 402.9 603 42.5
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 2.4e-108 397.1 589 43.0
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 4.1e-108 396.4 589 42.8
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 3.5e-107 393.3 613 43.2
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 4.6e-107 392.9 603 43.6
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 6.0e-107 392.5 582 42.4
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 1.3e-106 391.3 628 43.0
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 8.6e-106 388.7 624 40.1
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.2e-104 384.8 605 41.5
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 1.2e-104 384.8 619 41.2
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.1e-103 381.7 621 39.8
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 4.1e-100 369.8 601 43.1
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.1e-100 369.8 677 38.1
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.6e-99 366.3 601 43.4
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 2.3e-98 364.0 633 41.9
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 5.1e-98 362.8 606 43.1
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 5.1e-98 362.8 514 44.4
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 2.1e-96 357.5 614 42.3
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 1.2e-94 351.7 624 40.4
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 2.9e-93 347.1 607 39.9
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 8.4e-93 345.5 445 47.6
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 4.6e-91 339.7 362 54.4
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.3e-90 338.2 614 41.0
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 1.7e-90 337.8 605 41.0
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 3.0e-90 337.0 656 38.1
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 9.6e-89 332.0 669 39.0
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 6.2e-88 329.3 587 40.5
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.8e-86 322.8 443 45.1
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 1.3e-85 321.6 532 40.0
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.9e-84 317.8 621 36.6
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.6e-83 313.2 446 44.8
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 1.0e-82 312.0 736 35.2
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.0e-82 310.5 623 37.1
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 9.0e-71 272.3 540 36.1
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 2.0e-70 271.2 638 35.7
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 1.0e-69 268.9 627 36.4
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 2.5e-68 264.2 510 36.9
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 3.5e-67 260.4 513 36.3
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 5.1e-66 256.5 517 36.2
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 5.1e-66 256.5 497 36.4
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 8.2e-64 249.2 502 35.3
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 4.5e-62 243.4 490 34.9
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 7.6e-62 242.7 490 34.9
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.0e-61 242.3 519 35.5
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.2e-61 241.1 491 35.2
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 2.9e-61 240.7 503 35.8
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 6.5e-61 239.6 489 35.4
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 8.4e-61 239.2 491 35.2
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 1.4e-60 238.4 490 34.7
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 2.7e-43 181.0 231 47.6
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.7e-40 171.8 231 48.5
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 2.2e-40 171.4 464 33.0
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 8.2e-40 169.5 676 26.6
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 8.5e-37 159.5 556 28.8
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 3.6e-35 154.1 486 31.1
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 2.0e-33 148.3 572 28.0
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 8.8e-18 96.3 85 58.8
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 2.2e-16 91.7 483 26.5
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 7.7e-14 83.2 208 29.8
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 7.7e-14 83.2 208 31.7
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 4.3e-12 77.4 258 24.8
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.6e-11 75.5 80 47.5
Zm00001eb203960 Zea mays HOM05D006267 ORTHO05D007490 8.9e-10 69.7 313 27.8
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 2.2e-08 65.1 166 31.9


User provided reference genes

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