Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.3e-210 735.3 375 100.0
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.8e-170 602.8 374 82.9
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.8e-170 602.8 374 82.9
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.7e-165 586.3 373 80.2
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 8.0e-163 577.4 374 80.5
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 4.8e-160 568.2 376 77.7
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 8.2e-160 567.4 369 78.0
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 5.3e-159 564.7 374 77.8
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 1.6e-158 563.1 369 77.5
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 5.9e-158 561.2 377 76.4
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.7e-157 559.7 370 76.8
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 8.5e-157 557.4 372 75.3
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.9e-156 556.2 372 75.8
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.5e-156 555.8 373 76.1
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 9.4e-156 553.9 366 74.9
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 9.4e-156 553.9 373 75.9
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 9.4e-156 553.9 374 77.5
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 8.0e-155 550.8 371 75.5
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.0e-153 546.2 311 85.5
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 1.3e-152 543.5 372 73.7
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 2.2e-152 542.7 369 74.3
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 2.2e-152 542.7 369 73.2
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 2.8e-152 542.3 374 74.9
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 8.3e-152 540.8 376 74.5
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 8.3e-152 540.8 364 75.5
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 2.4e-151 539.3 360 74.7
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 3.1e-151 538.9 361 75.6
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 5.3e-151 538.1 374 74.3
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 5.3e-151 538.1 374 74.9
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 7.0e-151 537.7 376 75.0
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 9.1e-151 537.3 337 78.3
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.2e-150 537.0 377 73.5
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 1.6e-150 536.6 369 72.4
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 2.0e-150 536.2 378 74.3
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 3.5e-150 535.4 371 73.9
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 1.0e-149 533.9 361 74.5
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.7e-149 533.1 417 67.4
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 6.5e-149 531.2 371 74.1
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.5e-148 530.0 374 73.3
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 1.9e-148 529.6 369 72.4
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 2.5e-148 529.3 361 74.0
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 4.2e-148 528.5 361 74.0
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 8.0e-147 524.2 315 81.3
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.0e-147 524.2 315 81.3
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 1.8e-146 523.1 361 75.1
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 2.3e-146 522.7 340 76.2
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.3e-146 522.7 361 73.1
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 6.8e-146 521.2 377 73.2
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 1.2e-145 520.4 379 71.8
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 2.0e-145 519.6 379 71.5
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.7e-144 516.5 371 71.2
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 6.3e-144 514.6 369 69.4
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 6.3e-144 514.6 373 70.5
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 3.1e-143 512.3 379 70.4
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 3.1e-143 512.3 379 71.8
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 7.0e-143 511.1 378 70.6
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 2.0e-142 509.6 372 69.4
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 2.0e-142 509.6 375 70.7
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.7e-142 509.2 386 68.7
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 3.5e-142 508.8 376 71.0
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 3.5e-142 508.8 378 70.1
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 5.9e-142 508.1 311 78.1
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.3e-141 506.9 381 70.3
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.7e-141 506.5 372 69.9
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 1.7e-141 506.5 372 69.6
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 2.5e-140 502.7 373 71.0
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 5.5e-140 501.5 372 68.3
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 7.2e-140 501.1 403 65.5
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 2.8e-139 499.2 373 69.4
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 6.1e-139 498.0 370 68.6
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 8.0e-139 497.7 370 68.6
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 1.8e-138 496.5 367 69.5
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.3e-138 496.1 373 69.4
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 3.0e-138 495.7 370 68.6
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 3.0e-138 495.7 379 71.2
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 8.9e-138 494.2 285 83.9
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 9.8e-137 490.7 376 69.9
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.7e-136 490.0 306 77.8
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 6.3e-136 488.0 299 81.9
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 8.3e-136 487.6 375 68.0
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 3.5e-134 482.3 338 72.5
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 3.9e-133 478.8 369 66.1
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.6e-133 477.6 282 82.6
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 5.2e-130 468.4 280 80.7
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 2.6e-129 466.1 381 64.0
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 1.4e-127 460.3 372 62.1
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 3.5e-126 455.7 373 66.2
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 6.0e-126 454.9 333 67.9
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 2.9e-120 436.0 490 52.9
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 3.7e-112 409.1 373 60.1
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 1.3e-109 400.6 249 79.1
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.4e-104 381.7 271 69.7
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.3e-101 374.0 233 79.0
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.0e-98 362.5 359 53.8
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.0e-98 362.5 359 53.8
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 5.3e-98 362.1 206 87.9
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 3.2e-95 352.8 327 55.0
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 3.9e-93 345.9 236 70.8
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 2.1e-91 340.1 275 60.0
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.4e-90 337.4 248 67.7
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.3e-61 240.4 187 62.6
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 9.4e-55 218.4 166 70.5
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 4.1e-50 203.0 163 62.0
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 2.7e-46 190.3 125 79.2
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 1.7e-40 171.0 185 47.0
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 1.8e-34 151.0 133 60.2
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 4.2e-31 139.8 150 52.7
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.0e-29 135.2 105 70.5
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.1e-26 125.2 106 52.8
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 3.4e-20 103.6 86 62.8
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.7e-19 101.3 133 45.1
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 9.5e-07 58.9 48 60.4
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 9.5e-07 58.9 48 60.4


User provided reference genes

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