Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38696 Davidia involucrata HOM05D000433 ORTHO05D015038 6.8e-41 170.2 87 100.0
CSS0016926 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.4e-25 119.4 79 74.7
TAR383G1023 Trochodendron aralioides HOM05D000433 ORTHO05D003991 2.2e-15 85.5 79 59.5
Potri.018G042650 Populus trichocarpa HOM05D000433 ORTHO05D003991 2.7e-13 78.6 79 53.2
CSS0045124 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 3.5e-13 78.2 46 78.3
Potri.018G043500 Populus trichocarpa HOM05D000433 ORTHO05D003991 4.6e-13 77.8 78 48.7
Hma1.2p1_0774F.1_g216310 Hydrangea macrophylla HOM05D000433 ORTHO05D015038 6.0e-13 77.4 79 49.4
Atru.chr7.2097 Acer truncatum HOM05D000433 ORTHO05D003991 7.8e-13 77.0 79 51.9
CSS0015925 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 7.8e-13 77.0 54 72.2
Potri.006G239200 Populus trichocarpa HOM05D000433 ORTHO05D003991 1.0e-12 76.6 79 49.4
Dinv14257 Davidia involucrata HOM05D000433 ORTHO05D003991 3.9e-12 74.7 58 60.3
Dinv14259 Davidia involucrata HOM05D000433 ORTHO05D003991 3.9e-12 74.7 58 60.3
Potri.006G239402 Populus trichocarpa HOM05D000433 ORTHO05D003991 3.9e-12 74.7 56 67.9
Manes.03G057750 Manihot esculenta HOM05D000433 ORTHO05D003991 6.6e-12 73.9 69 53.6
Sabra06G0187000 Salix brachista HOM05D000433 ORTHO05D003991 3.3e-11 71.6 72 48.6
Duzib168G1402 Durio zibethinus HOM05D000433 ORTHO05D003991 4.3e-11 71.2 82 48.8
Actinidia30273 Actinidia chinensis HOM05D000433 ORTHO05D003991 5.6e-11 70.9 77 49.4
FvH4_2g35681 Fragaria vesca HOM05D000433 ORTHO05D003991 7.3e-11 70.5 73 53.4
GSVIVG01035632001 Vitis vinifera HOM05D000433 ORTHO05D003991 7.3e-11 70.5 80 48.8
Thecc.09G043800 Theobroma cacao HOM05D000433 ORTHO05D003991 9.6e-11 70.1 81 46.9
MBI04_g27076_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 1.3e-10 69.7 79 48.1
Atru.chr7.2110 Acer truncatum HOM05D000433 ORTHO05D003991 1.6e-10 69.3 79 45.6
Prupe.1G449300 Prunus persica HOM05D000433 ORTHO05D003991 1.6e-10 69.3 78 48.7
Dinv27895 Davidia involucrata HOM05D000433 ORTHO05D003991 2.1e-10 68.9 75 49.3
FvH4_2g35680 Fragaria vesca HOM05D000433 ORTHO05D003991 4.8e-10 67.8 55 60.0
MD15G1094300 Malus domestica HOM05D000433 ORTHO05D003991 6.2e-10 67.4 74 51.4
FAN20G2984 Fragaria x ananassa HOM05D000433 ORTHO05D003991 8.1e-10 67.0 55 60.0
DCAR_003121 Daucus carota HOM05D000433 ORTHO05D003991 1.1e-09 66.6 76 46.1
Dinv14256 Davidia involucrata HOM05D000433 ORTHO05D003991 1.1e-09 66.6 81 49.4
TAR383G0708 Trochodendron aralioides HOM05D000433 ORTHO05D003991 1.1e-09 66.6 49 67.3
Sabra18G0043100 Salix brachista HOM05D000433 ORTHO05D003991 1.8e-09 65.9 74 45.9
Sabra18G0043600 Salix brachista HOM05D000433 ORTHO05D003991 1.8e-09 65.9 74 44.6
PSO210G3307 Papaver somniferum HOM05D000433 ORTHO05D003991 3.1e-09 65.1 56 53.6
Solyc08g066710.2 Solanum lycopersicum HOM05D000433 ORTHO05D015038 3.1e-09 65.1 60 51.7
CSS0012936 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 4.0e-09 64.7 58 50.0
Sabra18G0043500 Salix brachista HOM05D000433 ORTHO05D003991 5.3e-09 64.3 74 43.2
Lsat_1_v5_gn_3_26320 Lactuca sativa HOM05D000433 ORTHO05D003991 9.0e-09 63.5 55 54.5
Prupe.1G449200 Prunus persica HOM05D000433 ORTHO05D003991 1.2e-08 63.2 81 43.2
Sopen08g020690 Solanum pennellii HOM05D000433 ORTHO05D003991 1.5e-08 62.8 60 50.0
TWI34G1265 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 2.0e-08 62.4 52 51.9
COL.COLO4_18651 Corchorus olitorius HOM05D000433 ORTHO05D003991 3.4e-08 61.6 45 55.6
Gohir.D06G093300 Gossypium hirsutum HOM05D000433 ORTHO05D003991 3.4e-08 61.6 82 41.5
Peaxi162Scf00323g00925 Petunia axillaris HOM05D000433 ORTHO05D003991 3.4e-08 61.6 60 48.3
ATR0705G175 Amborella trichopoda HOM05D000433 ORTHO05D003991 4.4e-08 61.2 50 58.0
Haze_16805 Corylus avellana HOM05D000433 ORTHO05D003991 4.4e-08 61.2 54 50.0
FAN13G2375 Fragaria x ananassa HOM05D000433 ORTHO05D003991 4.4e-08 61.2 71 47.9
Thecc.09G044200 Theobroma cacao HOM05D000433 ORTHO05D015038 4.4e-08 61.2 52 53.8
Lsat_1_v5_gn_3_26280 Lactuca sativa HOM05D000433 ORTHO05D003991 5.8e-08 60.8 57 50.9
Manes.03G057900 Manihot esculenta HOM05D000433 ORTHO05D003991 5.8e-08 60.8 80 47.5
Gorai.010G107700 Gossypium raimondii HOM05D000433 ORTHO05D003991 7.6e-08 60.5 82 41.5
Gohir.1Z049422 Gossypium hirsutum HOM05D000433 ORTHO05D003991 9.9e-08 60.1 82 41.5
Gohir.A06G093600 Gossypium hirsutum HOM05D000433 ORTHO05D003991 9.9e-08 60.1 82 41.5
ECA246G2703 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.7e-07 59.3 57 49.1
FAN18G1489 Fragaria x ananassa HOM05D000433 ORTHO05D003991 3.8e-07 58.2 55 50.9
Potri.006G239300 Populus trichocarpa HOM05D000433 ORTHO05D003991 3.8e-07 58.2 59 45.8
TWI34G1621 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 4.9e-07 57.8 52 46.2
FAN20G2606 Fragaria x ananassa HOM05D000433 ORTHO05D003991 6.4e-07 57.4 84 41.7
Gohir.A05G047200 Gossypium hirsutum HOM05D000433 ORTHO05D003991 6.4e-07 57.4 51 58.8
TWI34G0034 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 8.4e-07 57.0 56 53.6
GSVIVG01035633001 Vitis vinifera HOM05D000433 ORTHO05D003991 8.4e-07 57.0 79 44.3
Migut.A00213 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.4e-06 56.2 68 44.1
FvH4_2g35670 Fragaria vesca HOM05D000433 ORTHO05D003991 1.4e-06 56.2 76 43.4
Eucgr.C02921 Eucalyptus grandis HOM05D000433 ORTHO05D003991 1.9e-06 55.8 53 47.2
Gohir.D05G049100 Gossypium hirsutum HOM05D000433 ORTHO05D003991 1.9e-06 55.8 58 53.4
GSVIVG01035636001 Vitis vinifera HOM05D000433 ORTHO05D003991 1.9e-06 55.8 42 61.9
Manes.16G076200 Manihot esculenta HOM05D000433 ORTHO05D003991 2.4e-06 55.5 54 59.3
ECA246G0302 Erigeron canadensis HOM05D000433 ORTHO05D003991 3.2e-06 55.1 56 46.4
Gorai.009G050300 Gossypium raimondii HOM05D000433 ORTHO05D003991 4.2e-06 54.7 51 56.9
Solyc11g071227.1 Solanum lycopersicum HOM05D000433 ORTHO05D003991 4.2e-06 54.7 54 51.9
Gohir.D05G048950 Gossypium hirsutum HOM05D000433 ORTHO05D015038 5.4e-06 54.3 51 56.9
arahy.Tifrunner.gnm1.ann1.I9LXD5 Arachis hypogaea HOM05D000433 ORTHO05D003991 9.3e-06 53.5 49 51.0
RcHm_v2.0_Chr6g0306131 Rosa chinensis HOM05D000433 ORTHO05D003991 9.3e-06 53.5 36 66.7


User provided reference genes

Program Settings