Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38627 Davidia involucrata HOM05D000711 ORTHO05D034070 1.8e-75 285.8 139 100.0
Dinv36173 Davidia involucrata HOM05D000711 ORTHO05D000545 7.1e-32 141.0 93 75.3
Lj1C285T9 Lonicera japonica HOM05D000711 ORTHO05D000545 6.2e-28 127.9 132 56.8
Haze_23223 Corylus avellana HOM05D000711 ORTHO05D000545 9.9e-26 120.6 156 52.6
Rhsim13G0210800 Rhododendron simsii HOM05D000711 ORTHO05D000545 2.9e-25 119.0 136 54.4
MELO3C014564.2 Cucumis melo HOM05D000711 ORTHO05D000545 2.4e-24 115.9 149 52.3
TAR623G0316 Trochodendron aralioides HOM05D000711 ORTHO05D034070 3.5e-23 112.1 128 53.9
ClCG02G022900 Citrullus lanatus HOM05D000711 ORTHO05D000545 6.0e-23 111.3 143 51.0
Sabra09G0053600 Salix brachista HOM05D000711 ORTHO05D000545 2.3e-22 109.4 148 47.3
CSS0013588 Camellia sinensis var. sinensis HOM05D000711 ORTHO05D000545 1.5e-21 106.7 160 46.2
PGSC0003DMG400009453 Solanum tuberosum HOM05D000711 ORTHO05D000545 5.2e-19 98.2 124 56.5
Cpa.g.sc482.2 Carica papaya HOM05D000711 ORTHO05D034070 2.9e-17 92.4 92 57.6
Ca_06216_v3 Cicer arietinum L. HOM05D000711 ORTHO05D000545 4.9e-17 91.7 127 51.2
Medtr5g089750 Medicago truncatula HOM05D000711 ORTHO05D000545 6.4e-17 91.3 140 49.3
vmacro04024 Vaccinium macrocarpon HOM05D000711 ORTHO05D000545 8.4e-17 90.9 95 56.8
TPR.G19361 Trifolium pratense HOM05D000711 ORTHO05D000545 1.4e-16 90.1 124 53.2
VMungo0647G0330 Vigna mungo HOM05D000711 ORTHO05D000545 1.4e-16 90.1 125 48.8
MBI13_g06295_MAGBIO Magnolia biondii HOM05D000711 ORTHO05D000545 2.4e-16 89.4 144 49.3
Nitab4.5_0001500g0080 Nicotiana tabacum HOM05D000711 ORTHO05D000545 5.4e-16 88.2 165 43.6
Hma1.2p1_0129F.1_g060135 Hydrangea macrophylla HOM05D000711 ORTHO05D000545 9.3e-16 87.4 88 54.5
C02p05690 Brassica napus HOM05D000711 ORTHO05D000545 2.1e-15 86.3 119 47.1
AL6G23130 Arabidopsis lyrata HOM05D000711 ORTHO05D000545 4.6e-15 85.1 123 47.2
BraA02t05126Z Brassica rapa HOM05D000711 ORTHO05D000545 1.7e-14 83.2 140 43.6
Nitab4.5_0000730g0050 Nicotiana tabacum HOM05D000711 ORTHO05D000545 1.7e-14 83.2 169 42.6
BcaNung01196 Brassica carinata HOM05D000711 ORTHO05D000545 6.6e-14 81.3 121 46.3
Hund21984 Selenicereus undatus HOM05D000711 ORTHO05D000545 8.7e-14 80.9 123 47.2
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 3.3e-13 79.0 137 46.0
CARHR200780 Cardamine hirsuta HOM05D000711 ORTHO05D000545 5.6e-13 78.2 124 46.0
Lsat_1_v5_gn_2_33180 Lactuca sativa HOM05D000711 ORTHO05D000545 7.3e-13 77.8 90 57.8
Aa31LG3G14900 Aethionema arabicum HOM05D000711 ORTHO05D000545 2.1e-12 76.3 138 39.1
ECA238G1262 Erigeron canadensis HOM05D000711 ORTHO05D000545 2.1e-12 76.3 134 43.3
Sp6g31310 Schrenkiella parvula HOM05D000711 ORTHO05D000545 2.8e-12 75.9 122 45.9
VMungo0540G0402 Vigna mungo HOM05D000711 ORTHO05D000545 2.8e-12 75.9 115 42.6
CiPaw.14G113700 Carya illinoinensis HOM05D000711 ORTHO05D000545 3.6e-12 75.5 107 48.6
Gohir.D08G020200 Gossypium hirsutum HOM05D000711 ORTHO05D000545 3.6e-12 75.5 131 45.0
Hma1.2p1_2742F.1_g327760 Hydrangea macrophylla HOM05D000711 ORTHO05D000545 3.6e-12 75.5 83 51.8
Gorai.004G014800 Gossypium raimondii HOM05D000711 ORTHO05D000545 4.8e-12 75.1 131 45.0
Lsat_1_v5_gn_3_110380 Lactuca sativa HOM05D000711 ORTHO05D000545 4.8e-12 75.1 120 46.7
CAN.G96.12 Capsicum annuum HOM05D000711 ORTHO05D000545 8.1e-12 74.3 163 40.5
TAR369G0644 Trochodendron aralioides HOM05D000711 ORTHO05D000545 1.1e-11 73.9 62 61.3
CiPaw.13G151400 Carya illinoinensis HOM05D000711 ORTHO05D000545 1.4e-11 73.6 106 50.0
CsaV3_6G039030 Cucumis sativus L. HOM05D000711 ORTHO05D000545 1.8e-11 73.2 96 47.9
BcaNung03624 Brassica carinata HOM05D000711 ORTHO05D000545 4.0e-11 72.0 117 42.7
Actinidia16377 Actinidia chinensis HOM05D000711 ORTHO05D000545 6.9e-11 71.2 89 50.6
CANSAT21G1437 Cannabis sativa HOM05D000711 ORTHO05D000545 6.9e-11 71.2 84 53.6
CDE11G0414 Ceratophyllum demersum HOM05D000711 ORTHO05D000545 2.0e-10 69.7 95 46.3
Actinidia06959 Actinidia chinensis HOM05D000711 ORTHO05D000545 3.4e-10 68.9 93 49.5
EL10Ac4g10149 Beta vulgaris HOM05D000711 ORTHO05D000545 9.9e-10 67.4 87 49.4
ECA240G1698 Erigeron canadensis HOM05D000711 ORTHO05D000545 3.8e-09 65.5 128 39.8
HPP92_025146 Vanilla planifolia HOM05D000711 ORTHO05D000545 1.4e-08 63.5 147 39.5
GSVIVG01037267001 Vitis vinifera HOM05D000711 ORTHO05D000545 2.4e-08 62.8 46 73.9
Lalb_Chr17g0347951 Lupinus albus HOM05D000711 ORTHO05D000545 1.2e-07 60.5 81 45.7
Nn7g36688 Nelumbo nucifera HOM05D000711 ORTHO05D000545 1.2e-07 60.5 82 48.8
Sed0002186 Sechium edule HOM05D000711 ORTHO05D000545 1.2e-07 60.5 69 52.2
Lj6g0016073 Lotus japonicus HOM05D000711 ORTHO05D000545 3.5e-07 58.9 71 50.7
Glyma.02G280000 Glycine max HOM05D000711 ORTHO05D000545 7.9e-07 57.8 95 44.2
Thhalv10014142m.g Eutrema salsugineum HOM05D000711 ORTHO05D000545 1.7e-06 56.6 51 56.9
Thecc.09G249500 Theobroma cacao HOM05D000711 ORTHO05D000545 1.7e-06 56.6 79 45.6
HanXRQChr14g0438581 Helianthus annuus HOM05D000711 ORTHO05D000545 2.3e-06 56.2 93 45.2
RcHm_v2.0_Chr5g0050641 Rosa chinensis HOM05D000711 ORTHO05D000545 3.0e-06 55.8 85 42.4
Gohir.A05G071300 Gossypium hirsutum HOM05D000711 ORTHO05D000545 3.9e-06 55.5 73 46.6
Gohir.D05G074200 Gossypium hirsutum HOM05D000711 ORTHO05D000545 3.9e-06 55.5 73 46.6
Gorai.009G075300 Gossypium raimondii HOM05D000711 ORTHO05D000545 3.9e-06 55.5 73 46.6


User provided reference genes

Program Settings