Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 5.7e-122 441.0 242 100.0
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 3.3e-37 159.5 121 71.1
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 4.2e-24 115.9 110 51.8
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 7.2e-24 115.2 110 52.7
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 4.7e-23 112.5 105 59.0
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.0e-22 111.3 102 53.9
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.3e-20 104.4 96 53.1
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-19 101.3 106 50.0
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.4e-19 100.1 111 46.8
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 2.4e-19 100.1 126 43.7
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 5.4e-19 99.0 114 46.5
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 5.4e-19 99.0 106 50.0
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.6e-18 97.4 111 45.0
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.7e-18 95.1 101 52.5
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.0e-17 94.7 113 45.1
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 1.0e-17 94.7 104 49.0
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-17 94.4 114 45.6
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 6.5e-17 92.0 110 47.3
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 9.4e-16 88.2 117 42.7
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.6e-15 87.4 107 43.0
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 2.7e-15 86.7 115 45.2
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 3.6e-15 86.3 107 42.1
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 3.6e-15 86.3 116 41.4
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 8.0e-15 85.1 113 45.1
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 8.0e-15 85.1 112 40.2
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 1.4e-14 84.3 115 43.5
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.8e-14 84.0 115 43.5
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 3.0e-14 83.2 115 42.6
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 3.0e-14 83.2 115 42.6
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.0e-14 83.2 115 42.6
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 1.2e-13 81.3 111 42.3
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 1.2e-13 81.3 111 42.3
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.2e-13 81.3 117 36.8
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 1.5e-13 80.9 125 40.0
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.5e-13 80.9 125 40.0
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-13 80.9 109 37.6
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.0e-13 80.5 115 41.7
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-13 80.1 107 43.9
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 3.4e-13 79.7 108 40.7
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 3.4e-13 79.7 133 33.8
Dinv36833 Davidia involucrata HOM05D007277 ORTHO05D006336 7.5e-13 78.6 54 74.1
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 2.2e-12 77.0 106 42.5
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 3.7e-12 76.3 101 42.6
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 4.9e-12 75.9 87 41.4
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 4.9e-12 75.9 106 36.8
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.3e-12 75.5 107 38.3
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 8.3e-12 75.1 99 42.4
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 8.3e-12 75.1 126 39.7
FAN18G1844 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.1e-11 74.7 80 45.0
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-11 74.7 124 38.7
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.4e-11 74.3 105 39.0
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 1.4e-11 74.3 115 39.1
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 3.1e-11 73.2 127 34.6
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.1e-11 73.2 117 38.5
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 5.4e-11 72.4 100 40.0
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 5.4e-11 72.4 134 33.6
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 9.2e-11 71.6 101 44.6
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 9.2e-11 71.6 122 36.1
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 1.6e-10 70.9 109 39.4
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 1.6e-10 70.9 116 40.5
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.6e-10 70.9 112 36.6
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 1.6e-10 70.9 126 40.5
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 2.0e-10 70.5 114 39.5
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.7e-10 70.1 105 40.0
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 4.5e-10 69.3 112 40.2
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 7.7e-10 68.6 123 35.8
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.0e-09 68.2 113 35.4
Dinv36835 Davidia involucrata HOM05D007277 ORTHO05D006336 1.3e-09 67.8 61 62.3
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.3e-09 67.8 97 38.1
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-09 67.8 111 34.2
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 1.3e-09 67.8 113 42.5
FAN08G2286 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.7e-09 67.4 90 41.1
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.7e-09 67.4 112 35.7
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.3e-09 67.0 113 34.5
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 2.9e-09 66.6 114 42.1
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.9e-09 66.6 111 35.1
Sabra07G0108000 Salix brachista HOM05D010635 ORTHO05D006336 2.9e-09 66.6 102 36.3
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 3.8e-09 66.2 99 37.4
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 3.8e-09 66.2 99 43.4
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 3.8e-09 66.2 123 31.7
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 6.6e-09 65.5 89 46.1
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 6.6e-09 65.5 111 33.3
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 6.6e-09 65.5 112 33.9
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 8.6e-09 65.1 103 36.9
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 8.6e-09 65.1 122 32.0
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 8.6e-09 65.1 119 33.6
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 1.1e-08 64.7 112 33.9
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 2.5e-08 63.5 105 35.2
Sabra07G0108100 Salix brachista HOM05D010635 ORTHO05D006336 2.5e-08 63.5 120 32.5
TAR371G1039 Trochodendron aralioides HOM05D012741 ORTHO05D006336 3.3e-08 63.2 88 36.4
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 7.3e-08 62.0 117 34.2
QL10p048018 Quercus lobata HOM05D007277 ORTHO05D337307 7.3e-08 62.0 86 36.0
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 7.3e-08 62.0 106 35.8
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 9.5e-08 61.6 112 39.3
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 9.5e-08 61.6 103 34.0
TAR371G0786 Trochodendron aralioides HOM05D012741 ORTHO05D006336 9.5e-08 61.6 88 35.2
FvH4_5g13223 Fragaria vesca HOM05D007277 ORTHO05D006336 1.6e-07 60.8 78 37.2
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.6e-07 60.8 112 38.4
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.1e-07 60.5 95 36.8
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 2.1e-07 60.5 102 38.2
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.8e-07 60.1 113 35.4
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 4.7e-07 59.3 106 37.7
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 8.0e-07 58.5 116 36.2
Cc02_g33690 Coffea canephora HOM05D047743 ORTHO05D044673 1.0e-06 58.2 120 33.3
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.3e-06 57.0 108 34.3
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 3.0e-06 56.6 95 43.2
Sabra07G0120400 Salix brachista HOM05D010635 ORTHO05D006336 6.8e-06 55.5 73 39.7


User provided reference genes

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