Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 0.0e+00 1242.6 619 100.0
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 6.9e-297 1023.5 600 85.3
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 4.5e-296 1020.8 603 84.1
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 4.5e-296 1020.8 609 83.7
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 7.7e-296 1020.0 602 84.4
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 6.5e-295 1016.9 605 84.8
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.8e-292 1008.8 603 82.8
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 9.7e-291 1003.0 620 82.4
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 2.2e-290 1001.9 601 82.4
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 2.8e-290 1001.5 604 83.6
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 6.3e-290 1000.3 604 81.6
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 2.4e-289 998.4 601 82.2
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 3.1e-289 998.0 605 82.8
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 3.1e-289 998.0 604 82.5
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 1.2e-288 996.1 604 81.3
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 1.2e-288 996.1 604 82.5
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.5e-288 995.7 605 82.6
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.8e-287 991.1 603 82.4
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 2.5e-286 988.4 604 82.5
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.5e-286 988.4 603 82.4
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.5e-286 988.4 601 82.4
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 9.4e-286 986.5 604 82.1
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 9.4e-286 986.5 610 80.5
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 1.6e-285 985.7 602 81.2
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 4.7e-285 984.2 604 81.5
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 1.4e-284 982.6 605 81.8
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 3.9e-284 981.1 604 81.0
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 5.1e-284 980.7 601 81.2
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 5.1e-284 980.7 606 81.2
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 9.7e-283 976.5 602 80.9
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 9.7e-283 976.5 605 80.7
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 1.3e-282 976.1 601 81.2
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 1.7e-282 975.7 602 79.7
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 7.0e-281 970.3 608 77.6
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 1.6e-280 969.1 600 79.5
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 1.6e-280 969.1 608 77.6
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 3.5e-280 968.0 600 79.2
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 4.5e-280 967.6 603 77.8
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 5.9e-280 967.2 602 79.6
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 5.9e-280 967.2 602 80.6
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 5.9e-280 967.2 604 80.0
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 6.5e-279 963.8 601 78.9
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 1.5e-278 962.6 610 76.6
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 1.9e-278 962.2 601 80.4
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 7.2e-278 960.3 602 79.2
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 1.2e-277 959.5 605 77.4
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 2.1e-277 958.7 602 80.2
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 4.7e-277 957.6 602 79.6
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 8.0e-277 956.8 601 79.7
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 2.0e-275 952.2 604 78.5
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 4.4e-275 951.0 605 77.2
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 7.5e-275 950.3 605 77.0
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 7.5e-275 950.3 603 77.9
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 3.7e-274 948.0 604 76.2
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 4.8e-274 947.6 606 77.9
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 8.2e-274 946.8 588 79.1
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 5.3e-273 944.1 603 77.1
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 5.3e-273 944.1 603 77.6
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.2e-272 943.0 606 77.6
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 2.7e-272 941.8 600 78.0
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.3e-271 939.5 606 77.4
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 1.5e-270 936.0 602 76.6
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 4.2e-270 934.5 604 76.2
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 1.6e-269 932.6 600 77.3
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 2.3e-268 928.7 603 76.9
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 5.2e-268 927.5 601 76.9
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 5.7e-267 924.1 604 78.5
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 7.5e-267 923.7 606 76.4
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 1.3e-266 922.9 628 74.7
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 1.7e-266 922.5 602 77.2
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 2.2e-266 922.2 601 75.7
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 1.2e-264 916.4 600 75.5
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 2.7e-264 915.2 601 75.0
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 3.5e-264 914.8 600 75.2
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 1.1e-262 909.8 599 75.1
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 3.2e-262 908.3 608 74.3
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 7.2e-262 907.1 608 74.7
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 1.6e-261 906.0 600 75.8
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 4.7e-261 904.4 600 75.3
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 6.1e-261 904.0 604 74.2
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 3.0e-260 901.7 601 73.5
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 2.6e-259 898.7 606 75.6
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 9.8e-259 896.7 612 73.5
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 2.9e-250 868.6 600 72.2
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 3.7e-250 868.2 605 71.2
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 6.4e-250 867.5 605 71.6
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 6.4e-250 867.5 605 71.2
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 7.8e-248 860.5 604 70.0
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 8.6e-247 857.1 605 70.7
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 3.3e-246 855.1 605 70.6
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 1.3e-242 843.2 601 70.4
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 1.7e-242 842.8 666 64.9
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 4.9e-242 841.3 600 70.3
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.9e-241 839.3 470 87.9
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 2.6e-235 818.9 549 74.7
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 4.0e-228 795.0 727 56.1
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 3.0e-223 778.9 604 67.9
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 3.4e-219 765.4 470 79.4
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 1.7e-210 736.5 614 62.7
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 4.6e-208 728.4 699 53.5
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 7.9e-208 727.6 701 53.5
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 4.3e-206 721.8 599 63.9
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.8e-204 716.5 765 51.0
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 9.0e-204 714.1 591 62.3
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 1.3e-197 693.7 800 47.0
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 6.9e-196 688.0 397 85.9
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.4e-193 680.2 423 79.9
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 3.8e-186 655.6 404 79.5
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 6.3e-181 638.3 608 53.9
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 5.9e-179 631.7 540 61.9
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 9.7e-158 561.2 509 56.2
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.8e-143 513.8 364 73.1
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 1.9e-137 493.8 308 77.9
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 7.8e-123 445.3 396 60.6
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 5.1e-114 416.0 264 79.9
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 7.6e-110 402.1 339 59.6
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 1.0e-90 338.6 215 75.8
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 3.4e-86 323.6 339 52.5
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 2.1e-83 314.3 543 39.2
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 6.0e-83 312.8 191 79.1
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 2.8e-64 250.8 151 78.8
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.4e-47 195.3 139 69.8
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.9e-36 158.3 326 33.1
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 4.7e-27 127.1 74 78.4
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.1e-11 75.1 49 75.5
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 8.0e-11 73.2 88 45.5
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 5.4e-07 60.5 48 62.5


User provided reference genes

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