Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 1.7e-72 275.8 128 100.0
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 1.7e-72 275.8 128 100.0
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 4.7e-22 108.2 94 52.1
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 2.0e-17 92.8 99 47.5
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 1.0e-16 90.5 109 41.3
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 5.0e-16 88.2 84 42.9
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 3.2e-15 85.5 103 40.8
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 3.2e-15 85.5 124 35.5
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 3.2e-15 85.5 108 40.7
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 7.2e-15 84.3 97 40.2
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 2.1e-14 82.8 119 37.0
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 6.1e-14 81.3 94 38.3
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.1e-14 81.3 94 38.3
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.1e-14 81.3 94 38.3
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.1e-14 81.3 94 38.3
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 8.0e-14 80.9 96 37.5
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 8.0e-14 80.9 96 37.5
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 1.0e-13 80.5 99 39.4
CSS0025386 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 1.8e-13 79.7 85 37.6
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.8e-13 79.7 111 37.8
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 2.3e-13 79.3 107 40.2
Dinv10884 Davidia involucrata HOM05D025719 ORTHO05D006370 2.6e-12 75.9 61 55.7
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 2.6e-12 75.9 95 37.9
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 2.6e-12 75.9 93 36.6
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.4e-12 75.1 93 36.6
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.2e-11 72.8 107 37.4
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.7e-11 72.0 93 37.6
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.7e-11 72.0 123 35.0
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.8e-11 71.6 111 34.2
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 6.3e-11 71.2 101 31.7
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 8.3e-11 70.9 97 30.9
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 1.4e-10 70.1 49 49.0
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 1.4e-10 70.1 107 30.8
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 1.4e-10 70.1 94 37.2
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 1.8e-10 69.7 107 34.6
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 2.4e-10 69.3 93 34.4
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 2.4e-10 69.3 95 33.7
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 2.4e-10 69.3 95 34.7
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 5.4e-10 68.2 87 37.9
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 5.4e-10 68.2 97 35.1
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 7.0e-10 67.8 107 34.6
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.0e-10 67.8 66 42.4
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 9.1e-10 67.4 90 33.3
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.2e-09 67.0 50 54.0
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.6e-09 66.6 94 36.2
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.0e-09 66.2 88 37.5
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 2.7e-09 65.9 98 40.8
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 3.5e-09 65.5 99 31.3
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.5e-09 65.5 122 32.0
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 3.5e-09 65.5 99 35.4
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 7.7e-09 64.3 51 49.0
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.7e-09 64.3 100 31.0
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 7.7e-09 64.3 100 31.0
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.3e-08 63.5 55 43.6
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.3e-08 63.5 88 33.0
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.7e-08 63.2 97 34.0
Actinidia37836 Actinidia chinensis HOM05D010100 ORTHO05D006370 2.2e-08 62.8 56 48.2
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 2.2e-08 62.8 73 31.5
Peaxi162Scf01129g00001 Petunia axillaris HOM05D008032 ORTHO05D006370 2.9e-08 62.4 98 33.7
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.9e-08 62.4 90 31.1
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.9e-08 62.4 116 30.2
Dinv40938 Davidia involucrata HOM05D010100 ORTHO05D006370 5.0e-08 61.6 71 40.8
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 5.0e-08 61.6 98 31.6
Dinv07139 Davidia involucrata HOM05D010100 ORTHO05D006370 1.5e-07 60.1 107 37.4
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 1.5e-07 60.1 54 38.9
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 1.5e-07 60.1 54 42.6
Dinv38294 Davidia involucrata HOM05D010100 ORTHO05D006370 1.9e-07 59.7 52 48.1
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-07 59.3 76 38.2
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.5e-07 59.3 49 46.9
Sopen10g005760 Solanum pennellii HOM05D008877 ORTHO05D006370 3.2e-07 58.9 53 45.3
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.2e-07 57.8 49 44.9
PGSC0003DMG400035061 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.4e-07 57.4 55 40.0
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.4e-07 57.4 77 32.5
Lj2C10T1 Lonicera japonica HOM05D009066 ORTHO05D001339 1.6e-06 56.6 97 32.0
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 56.6 78 32.1
PSO478G0418 Papaver somniferum HOM05D002145 ORTHO05D000007 1.6e-06 56.6 93 28.0
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.6e-06 56.6 83 33.7
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.1e-06 56.2 49 44.9
Actinidia35965 Actinidia chinensis HOM05D008032 ORTHO05D006370 2.7e-06 55.8 55 40.0
CSS0020711 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D006370 2.7e-06 55.8 64 37.5
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.7e-06 55.8 74 37.8
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-06 55.8 74 32.4
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-06 55.8 78 32.1
Solyc10g012000.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 3.6e-06 55.5 53 41.5
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-06 55.1 92 32.6
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-06 55.1 78 32.1
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.7e-06 55.1 58 44.8
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-06 54.7 97 26.8
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-06 54.7 95 27.4
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-06 54.7 74 32.4
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-06 54.7 74 32.4
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-06 54.7 74 32.4
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 6.1e-06 54.7 101 23.8
CSS0027706 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 8.0e-06 54.3 108 32.4
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 8.0e-06 54.3 90 33.3
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 8.0e-06 54.3 97 30.9
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 8.0e-06 54.3 97 30.9
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 8.0e-06 54.3 97 30.9


User provided reference genes

Program Settings