Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38408 Davidia involucrata HOM05D004695 ORTHO05D005372 1.2e-49 199.5 97 100.0
GSVIVG01017906001 Vitis vinifera HOM05D004695 ORTHO05D005372 6.2e-27 124.0 93 72.0
Hma1.2p1_0995F.1_g245790 Hydrangea macrophylla HOM05D004695 ORTHO05D005372 1.1e-26 123.2 94 70.2
Dinv44493 Davidia involucrata HOM05D003236 ORTHO05D003620 1.8e-26 122.5 84 79.8
Aqoxy2G03294 Aquilegia oxysepala HOM05D004695 ORTHO05D005372 4.2e-23 111.3 90 65.6
Thecc.01G113400 Theobroma cacao HOM05D004695 ORTHO05D005372 5.1e-21 104.4 88 62.5
Cc03_g03270 Coffea canephora HOM05D004695 ORTHO05D005372 1.1e-20 103.2 86 66.3
Thecc.04G224700 Theobroma cacao HOM05D004695 ORTHO05D005372 4.3e-20 101.3 73 69.9
MD13G1185600 Malus domestica HOM05D004695 ORTHO05D005372 7.4e-20 100.5 95 60.0
Prupe.1G153300 Prunus persica HOM05D004695 ORTHO05D005372 7.4e-20 100.5 73 75.3
QL06p003781 Quercus lobata HOM05D004695 ORTHO05D005372 2.1e-19 99.0 95 63.2
Nn1g02189 Nelumbo nucifera HOM05D004695 ORTHO05D005372 2.8e-19 98.6 89 64.0
TAR636G3528 Trochodendron aralioides HOM05D004695 ORTHO05D005372 1.4e-18 96.3 93 59.1
Gohir.A02G135400 Gossypium hirsutum HOM05D004695 ORTHO05D005372 3.1e-18 95.1 73 63.0
Manes.03G182700 Manihot esculenta HOM05D004695 ORTHO05D005372 4.0e-18 94.7 88 61.4
Gorai.003G047400 Gossypium raimondii HOM05D004695 ORTHO05D005372 6.9e-18 94.0 70 65.7
Manes.15G024700 Manihot esculenta HOM05D004695 ORTHO05D005372 6.9e-18 94.0 88 59.1
Ciclev10006235m.g Citrus clementina HOM05D004695 ORTHO05D005372 9.0e-18 93.6 76 67.1
MBI17_g29941_MAGBIO Magnolia biondii HOM05D004695 ORTHO05D005372 2.0e-17 92.4 101 53.5
Gohir.A10G084407 Gossypium hirsutum HOM05D004695 ORTHO05D005372 7.6e-17 90.5 75 66.7
Gohir.D03G046400 Gossypium hirsutum HOM05D004695 ORTHO05D005372 1.0e-16 90.1 70 64.3
Peaxi162Scf00134g02026 Petunia axillaris HOM05D004695 ORTHO05D005372 1.0e-16 90.1 77 62.3
Nitab4.5_0000630g0080 Nicotiana tabacum HOM05D004695 ORTHO05D005372 1.3e-16 89.7 90 60.0
Actinidia23502 Actinidia chinensis HOM05D004695 ORTHO05D005372 1.7e-16 89.4 67 67.2
MSTRG.10006 Avicennia marina HOM05D004695 ORTHO05D005372 1.7e-16 89.4 91 52.7
RcHm_v2.0_Chr4g0417511 Rosa chinensis HOM05D004695 ORTHO05D005372 1.7e-16 89.4 72 66.7
COL.COLO4_11008 Corchorus olitorius HOM05D004695 ORTHO05D005372 2.2e-16 89.0 98 58.2
FvH4_4g14800 Fragaria vesca HOM05D004695 ORTHO05D005372 3.8e-16 88.2 74 64.9
FAN12G3688 Fragaria x ananassa HOM05D004695 ORTHO05D005372 3.8e-16 88.2 74 64.9
Gohir.D10G104100 Gossypium hirsutum HOM05D004695 ORTHO05D005372 3.8e-16 88.2 75 65.3
Gorai.011G113700 Gossypium raimondii HOM05D004695 ORTHO05D005372 4.9e-16 87.8 75 65.3
Cfa015601 Carpinus fangiana HOM05D004695 ORTHO05D005372 1.1e-15 86.7 103 54.4
CiPaw.01G161500 Carya illinoinensis HOM05D004695 ORTHO05D005372 1.4e-15 86.3 91 58.2
FAN22G2275 Fragaria x ananassa HOM05D004695 ORTHO05D005372 1.4e-15 86.3 74 63.5
Duzib264G0758 Durio zibethinus HOM05D004695 ORTHO05D005372 1.9e-15 85.9 91 57.1
Glyma.15G105500 Glycine max HOM05D004695 ORTHO05D005372 2.5e-15 85.5 73 58.9
TWI09G0501 Tripterygium wilfordii HOM05D004695 ORTHO05D005372 2.5e-15 85.5 97 57.7
Duzib187G0357 Durio zibethinus HOM05D004695 ORTHO05D005372 4.2e-15 84.7 76 63.2
FAN07G1591 Fragaria x ananassa HOM05D004695 ORTHO05D005372 4.2e-15 84.7 73 64.4
Peaxi162Scf00134g00214 Petunia axillaris HOM05D004695 ORTHO05D005372 7.1e-15 84.0 75 57.3
Atru.chr4.2536 Acer truncatum HOM05D004695 ORTHO05D005372 9.3e-15 83.6 79 62.0
Duzib147G1031 Durio zibethinus HOM05D004695 ORTHO05D005372 9.3e-15 83.6 102 52.0
COL.COLO4_26631 Corchorus olitorius HOM05D004695 ORTHO05D005372 1.2e-14 83.2 75 58.7
TWI73G0302 Tripterygium wilfordii HOM05D004695 ORTHO05D005372 1.2e-14 83.2 95 57.9
Cpa.g.sc147.16 Carica papaya HOM05D004695 ORTHO05D005372 3.5e-14 81.6 73 63.0
Glyma.13G207100 Glycine max HOM05D004695 ORTHO05D005372 3.5e-14 81.6 88 52.3
Haze_00944 Corylus avellana HOM05D004695 ORTHO05D005372 4.6e-14 81.3 102 52.0
Glyma.07G258100 Glycine max HOM05D004695 ORTHO05D005372 4.6e-14 81.3 73 58.9
Sabra08G0157600 Salix brachista HOM05D004695 ORTHO05D005372 6.0e-14 80.9 85 54.1
Actinidia36986 Actinidia chinensis HOM05D004695 ORTHO05D005372 7.9e-14 80.5 92 55.4
Lj4g0022767 Lotus japonicus HOM05D004695 ORTHO05D005372 2.3e-13 79.0 95 50.5
Potri.008G204100 Populus trichocarpa HOM05D004695 ORTHO05D005372 2.3e-13 79.0 86 54.7
Lalb_Chr15g0087411 Lupinus albus HOM05D004695 ORTHO05D005372 3.9e-13 78.2 73 60.3
MBI19_g16320_MAGBIO Magnolia biondii HOM05D004695 ORTHO05D005372 5.1e-13 77.8 105 51.4
Rhsim04G0203400 Rhododendron simsii HOM05D004695 ORTHO05D005372 5.1e-13 77.8 103 49.5
MBI19_g46840_MAGBIO Magnolia biondii HOM05D004695 ORTHO05D005372 1.1e-12 76.6 105 50.5
Phvul.006G151900 Phaseolus vulgaris HOM05D004695 ORTHO05D005372 1.1e-12 76.6 73 58.9
VMungo0540G1940 Vigna mungo HOM05D004695 ORTHO05D005372 1.1e-12 76.6 73 56.2
HanXRQChr10g0311131 Helianthus annuus HOM05D004695 ORTHO05D005372 1.9e-12 75.9 74 55.4
arahy.Tifrunner.gnm1.ann1.NGDM9G Arachis hypogaea HOM05D004695 ORTHO05D005372 3.3e-12 75.1 67 56.7
arahy.Tifrunner.gnm1.ann1.P3SWUI Arachis hypogaea HOM05D004695 ORTHO05D005372 3.3e-12 75.1 67 56.7
Ca_00631_v3 Cicer arietinum L. HOM05D004695 ORTHO05D005372 4.3e-12 74.7 77 54.5
Medtr2g022610 Medicago truncatula HOM05D004695 ORTHO05D005372 7.4e-12 73.9 92 50.0
Medtr4g131720 Medicago truncatula HOM05D004695 ORTHO05D005372 2.2e-11 72.4 75 60.0
TPR.G36993 Trifolium pratense HOM05D004695 ORTHO05D005372 2.2e-11 72.4 87 48.3
CiPaw.02G093500 Carya illinoinensis HOM05D004695 ORTHO05D005372 2.8e-11 72.0 68 64.7
DCAR_030605 Daucus carota HOM05D004695 ORTHO05D005372 2.8e-11 72.0 87 54.0
Psat1g182680 Pisum sativum HOM05D004695 ORTHO05D005372 3.7e-11 71.6 88 50.0
Lsat_1_v5_gn_5_74361 Lactuca sativa HOM05D004695 ORTHO05D005372 6.3e-11 70.9 74 55.4
Nitab4.5_0015975g0010 Nicotiana tabacum HOM05D004695 ORTHO05D005372 6.3e-11 70.9 91 53.8
Oeu042788.1 Olea europaea HOM05D004695 ORTHO05D005372 6.3e-11 70.9 89 49.4
CANSAT78G0872 Cannabis sativa HOM05D004695 ORTHO05D005372 8.2e-11 70.5 77 50.6
Lalb_Chr18g0056181 Lupinus albus HOM05D004695 ORTHO05D005372 8.2e-11 70.5 89 44.9
TPR.G912 Trifolium pratense HOM05D004695 ORTHO05D005372 1.1e-10 70.1 91 46.2
DCAR_002402 Daucus carota HOM05D004695 ORTHO05D005372 1.8e-10 69.3 100 49.0
Eucgr.B01119 Eucalyptus grandis HOM05D004695 ORTHO05D005372 3.1e-10 68.6 98 50.0
SGA_v2.0_scaffold39G15314 Striga asiatica HOM05D004695 ORTHO05D005372 4.1e-10 68.2 103 46.6
MBI17_g27868_MAGBIO Magnolia biondii HOM05D004695 ORTHO05D005372 1.2e-09 66.6 42 69.0
PGSC0003DMG400008993 Solanum tuberosum HOM05D004695 ORTHO05D005372 1.2e-09 66.6 96 46.9
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 3.4e-09 65.1 59 61.0
Phvul.003G091400 Phaseolus vulgaris HOM05D004695 ORTHO05D005372 3.4e-09 65.1 73 49.3
Solyc01g079830.3 Solanum lycopersicum HOM05D004695 ORTHO05D005372 4.5e-09 64.7 98 48.0
arahy.Tifrunner.gnm1.ann1.6BH6U4 Arachis hypogaea HOM05D004695 ORTHO05D005372 7.6e-09 63.9 64 56.2
THA.LOC104818805 Tarenaya hassleriana HOM05D004695 ORTHO05D005372 2.2e-08 62.4 97 45.4
Lj6g0025020 Lotus japonicus HOM05D004695 ORTHO05D005372 5.0e-08 61.2 77 51.9
HanXRQChr12g0359551 Helianthus annuus HOM05D004695 ORTHO05D005372 6.5e-08 60.8 59 54.2
SalBow2G2333 Salvia bowleyana HOM05D004695 ORTHO05D005372 1.4e-07 59.7 82 50.0
VMungo1215G1766 Vigna mungo HOM05D004695 ORTHO05D005372 1.9e-07 59.3 95 45.3
unitig_32.g11733 Utricularia gibba HOM05D004695 ORTHO05D005372 2.5e-07 58.9 70 50.0
unitig_748.g8553 Utricularia gibba HOM05D004695 ORTHO05D005372 3.2e-07 58.5 59 54.2
DCAR_027181 Daucus carota HOM05D004695 ORTHO05D005372 5.5e-07 57.8 87 46.0
PSO170G6030 Papaver somniferum HOM05D004695 ORTHO05D005372 5.5e-07 57.8 103 41.7
PSO302G0161 Papaver somniferum HOM05D004695 ORTHO05D005372 9.3e-07 57.0 93 48.4
Glyma.17G015900 Glycine max HOM05D004695 ORTHO05D005372 2.1e-06 55.8 73 47.9
PGR142G2632 Punica granatum HOM05D004695 ORTHO05D005372 4.6e-06 54.7 58 62.1
AUR62038192 Chenopodium quinoa HOM05D004695 ORTHO05D005372 6.1e-06 54.3 68 52.9


User provided reference genes

Program Settings