Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 5.9e-36 153.7 78 100.0
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 5.0e-11 70.9 39 84.6
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 3.3e-10 68.2 42 78.6
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 3.3e-10 68.2 42 78.6
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 5.6e-10 67.4 37 86.5
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 1.2e-09 66.2 39 82.1
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 2.1e-09 65.5 37 83.8
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 2.8e-09 65.1 37 81.1
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 3.6e-09 64.7 39 79.5
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 6.2e-09 63.9 37 75.7
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 1.4e-08 62.8 42 71.4
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 1.4e-08 62.8 39 76.9
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 1.8e-08 62.4 39 76.9
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 1.8e-08 62.4 39 76.9
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 2.3e-08 62.0 40 70.0
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 3.1e-08 61.6 37 73.0
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 3.1e-08 61.6 37 73.0
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 3.1e-08 61.6 37 73.0
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 3.1e-08 61.6 37 73.0
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 3.1e-08 61.6 37 73.0
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 4.0e-08 61.2 61 55.7
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 4.0e-08 61.2 61 55.7
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 4.0e-08 61.2 61 55.7
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 4.0e-08 61.2 61 55.7
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 5.2e-08 60.8 59 55.9
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 5.2e-08 60.8 40 72.5
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 8.9e-08 60.1 61 57.4
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 8.9e-08 60.1 61 57.4
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 8.9e-08 60.1 38 73.7
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 1.5e-07 59.3 38 76.3
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 1.5e-07 59.3 38 76.3
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.0e-07 58.9 39 71.8
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 2.0e-07 58.9 61 54.1
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.6e-07 58.5 39 71.8
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 3.4e-07 58.2 38 71.1
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 3.4e-07 58.2 37 75.7
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 3.4e-07 58.2 38 71.1
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 4.4e-07 57.8 37 70.3
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 4.4e-07 57.8 59 50.8
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 7.5e-07 57.0 37 67.6
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 7.5e-07 57.0 42 66.7
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 7.5e-07 57.0 42 66.7
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 7.5e-07 57.0 42 66.7
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 7.5e-07 57.0 42 66.7
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 1.3e-06 56.2 35 71.4
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 1.3e-06 56.2 60 53.3
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 1.3e-06 56.2 61 50.8
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 1.7e-06 55.8 60 51.7
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.7e-06 55.8 37 62.2
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 1.7e-06 55.8 39 71.8
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 1.7e-06 55.8 60 53.3
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 2.2e-06 55.5 56 57.1
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 2.9e-06 55.1 37 67.6
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 2.9e-06 55.1 37 67.6
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 2.9e-06 55.1 37 67.6
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 2.9e-06 55.1 37 67.6
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.9e-06 55.1 62 48.4
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 2.9e-06 55.1 62 51.6
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 2.9e-06 55.1 37 67.6
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 2.9e-06 55.1 37 67.6
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.7e-06 54.7 62 48.4
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 3.7e-06 54.7 35 71.4
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 4.9e-06 54.3 61 47.5
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 4.9e-06 54.3 37 64.9
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 4.9e-06 54.3 37 70.3
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 6.4e-06 53.9 39 69.2
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 8.3e-06 53.5 59 49.2
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 8.3e-06 53.5 37 70.3
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 8.3e-06 53.5 37 70.3
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 8.3e-06 53.5 37 70.3
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 8.3e-06 53.5 59 49.2
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 8.3e-06 53.5 37 64.9


User provided reference genes

Program Settings