Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38332 Davidia involucrata HOM05D007701 ORTHO05D006440 6.6e-85 317.4 167 100.0
Dinv44434 Davidia involucrata HOM05D007701 ORTHO05D006440 3.3e-36 155.6 121 76.0
Haze_01050 Corylus avellana HOM05D007701 ORTHO05D006440 6.9e-26 121.3 129 58.1
Cfa015502 Carpinus fangiana HOM05D007701 ORTHO05D006440 1.0e-24 117.5 129 56.6
Duzib151G0788 Durio zibethinus HOM05D007701 ORTHO05D006440 7.2e-23 111.3 122 59.0
Hma1.2p1_0078F.1_g040840 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 9.4e-23 110.9 126 56.3
Thecc.04G276200 Theobroma cacao HOM05D007701 ORTHO05D006440 2.0e-20 103.2 120 56.7
CiPaw.01G153900 Carya illinoinensis HOM05D007701 ORTHO05D006440 3.7e-19 99.0 123 53.7
Phvul.006G160600 Phaseolus vulgaris HOM05D007701 ORTHO05D006440 8.2e-19 97.8 130 46.9
QL12p038321 Quercus lobata HOM05D007701 ORTHO05D006440 1.1e-18 97.4 120 53.3
COL.COLO4_13938 Corchorus olitorius HOM05D007701 ORTHO05D006440 5.3e-18 95.1 106 60.4
Duzib212G0358 Durio zibethinus HOM05D007701 ORTHO05D006440 5.3e-18 95.1 119 53.8
Glyma.15G098700 Glycine max HOM05D007701 ORTHO05D006440 2.0e-17 93.2 128 49.2
Glyma.13G214500 Glycine max HOM05D007701 ORTHO05D006440 2.9e-16 89.4 128 48.4
Lalb_Chr15g0087071 Lupinus albus HOM05D007701 ORTHO05D006440 1.1e-15 87.4 121 49.6
Ca_00580_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 1.9e-15 86.7 125 42.4
CiPaw.02G087100 Carya illinoinensis HOM05D007701 ORTHO05D006440 9.4e-15 84.3 125 48.0
Medtr2g020370 Medicago truncatula HOM05D007701 ORTHO05D006440 9.4e-15 84.3 104 50.0
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 1.6e-14 83.6 121 47.9
QL06p007247 Quercus lobata HOM05D007701 ORTHO05D006440 2.1e-14 83.2 113 47.8
TPR.G1519 Trifolium pratense HOM05D007701 ORTHO05D006440 2.3e-13 79.7 127 42.5
Potri.010G031700 Populus trichocarpa HOM05D007701 ORTHO05D006440 4.0e-13 79.0 118 46.6
Oeu021618.1 Olea europaea HOM05D007701 ORTHO05D006440 6.7e-13 78.2 100 51.0
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 6.7e-13 78.2 120 45.0
Sabra10G0031300 Salix brachista HOM05D007701 ORTHO05D006440 1.2e-12 77.4 144 41.7
TWI09G0131 Tripterygium wilfordii HOM05D007701 ORTHO05D006440 1.5e-12 77.0 93 52.7
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 4.4e-12 75.5 120 45.8
Peaxi162Scf00041g01724 Petunia axillaris HOM05D020366 ORTHO05D006440 5.7e-12 75.1 102 46.1
Prupe.8G252700 Prunus persica HOM05D007701 ORTHO05D006440 7.5e-12 74.7 118 47.5
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 9.7e-12 74.3 119 42.9
Manes.05G068100 Manihot esculenta HOM05D007701 ORTHO05D006440 1.3e-11 73.9 112 45.5
Gohir.A11G118000 Gossypium hirsutum HOM05D007701 ORTHO05D006440 4.8e-11 72.0 117 45.3
Potri.008G195700 Populus trichocarpa HOM05D007701 ORTHO05D006440 1.1e-10 70.9 94 45.7
PGSC0003DMG400031864 Solanum tuberosum HOM05D007701 ORTHO05D006440 1.1e-10 70.9 113 47.8
Lalb_Chr20g0118191 Lupinus albus HOM05D007701 ORTHO05D006440 3.1e-10 69.3 105 45.7
Thecc.01G290700 Theobroma cacao HOM05D007701 ORTHO05D006440 3.1e-10 69.3 119 42.9
Migut.G00219 Erythranthe guttata HOM05D007701 ORTHO05D006440 4.1e-10 68.9 111 45.9
Nitab4.5_0000232g0150 Nicotiana tabacum HOM05D020366 ORTHO05D006440 5.3e-10 68.6 103 46.6
CiPaw.07G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 7.0e-10 68.2 100 47.0
Solyc09g074450.1 Solanum lycopersicum HOM05D007701 ORTHO05D006440 7.0e-10 68.2 106 50.0
Medtr1g088970 Medicago truncatula HOM05D007701 ORTHO05D006440 2.0e-09 66.6 131 39.7
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 2.0e-09 66.6 105 49.5
LjContig00389g0004887 Lotus japonicus HOM05D007701 ORTHO05D006440 2.7e-09 66.2 108 42.6
Gohir.D11G122900 Gossypium hirsutum HOM05D007701 ORTHO05D006440 3.5e-09 65.9 117 43.6
Gorai.007G131800 Gossypium raimondii HOM05D007701 ORTHO05D006440 3.5e-09 65.9 117 43.6
Hma1.2p1_0209F.1_g089060 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 3.5e-09 65.9 119 42.9
Migut.D00227 Erythranthe guttata HOM05D007701 ORTHO05D006440 4.5e-09 65.5 109 44.0
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 5.9e-09 65.1 115 45.2
CDE05G2550 Ceratophyllum demersum HOM05D007701 ORTHO05D006440 7.7e-09 64.7 95 45.3
Nitab4.5_0003631g0050 Nicotiana tabacum HOM05D020366 ORTHO05D006440 7.7e-09 64.7 107 45.8
Duzib138G0471 Durio zibethinus HOM05D007701 ORTHO05D006440 1.0e-08 64.3 119 43.7
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 1.3e-08 63.9 121 43.8
Psat1g187000 Pisum sativum HOM05D007701 ORTHO05D006440 1.3e-08 63.9 125 37.6
THA.LOC104802728 Tarenaya hassleriana HOM05D012083 ORTHO05D006440 1.3e-08 63.9 81 51.9
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 1.7e-08 63.5 121 43.0
CANSAT25G3325 Cannabis sativa HOM05D007701 ORTHO05D006440 2.2e-08 63.2 105 41.0
ClCG06G005430 Citrullus lanatus HOM05D007701 ORTHO05D006440 2.9e-08 62.8 118 43.2
CAN.G426.28 Capsicum annuum HOM05D007701 ORTHO05D006440 3.8e-08 62.4 115 44.3
RcHm_v2.0_Chr4g0420861 Rosa chinensis HOM05D016333 ORTHO05D006440 5.0e-08 62.0 127 40.9
COL.COLO4_08025 Corchorus olitorius HOM05D007701 ORTHO05D006440 6.5e-08 61.6 119 43.7
Prupe.1G143000 Prunus persica HOM05D016333 ORTHO05D006440 6.5e-08 61.6 128 40.6
Ca_10375_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 1.1e-07 60.8 112 39.3
Sopen00g012820 Solanum pennellii HOM05D020366 ORTHO05D006440 1.1e-07 60.8 108 45.4
Sopen11g019180 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-07 60.5 92 48.9
MELO3C021367.2 Cucumis melo HOM05D007701 ORTHO05D006440 1.9e-07 60.1 101 44.6
CsaV3_6G005680 Cucumis sativus L. HOM05D007701 ORTHO05D006440 1.9e-07 60.1 101 44.6
Manes.03G190500 Manihot esculenta HOM05D007701 ORTHO05D006440 1.9e-07 60.1 113 40.7
Solyc04g074167.1 Solanum lycopersicum HOM05D020366 ORTHO05D006440 1.9e-07 60.1 108 44.4
CiPaw.08G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 5.5e-07 58.5 76 47.4
Gohir.A08G072500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 5.5e-07 58.5 121 42.1
Psat6g167920 Pisum sativum HOM05D007701 ORTHO05D006440 5.5e-07 58.5 84 50.0
CARHR194310 Cardamine hirsuta HOM05D012083 ORTHO05D006440 7.2e-07 58.2 78 43.6
FAN12G2470 Fragaria x ananassa HOM05D016333 ORTHO05D006440 7.2e-07 58.2 136 38.2
SalBow2G1499 Salvia bowleyana HOM05D007701 ORTHO05D006440 7.2e-07 58.2 104 46.2
A10p20870 Brassica napus HOM05D012083 ORTHO05D006440 9.4e-07 57.8 81 46.9
FvH4_4g17060 Fragaria vesca HOM05D016333 ORTHO05D006440 9.4e-07 57.8 119 40.3
SGA_v2.0_scaffold57G20262 Striga asiatica HOM05D007701 ORTHO05D006440 9.4e-07 57.8 115 40.0
FAN12G2150 Fragaria x ananassa HOM05D016333 ORTHO05D006440 1.2e-06 57.4 134 38.1
BcaB08g36652 Brassica carinata HOM05D012083 ORTHO05D006440 1.6e-06 57.0 74 47.3
CAN.G101.7 Capsicum annuum HOM05D020366 ORTHO05D006440 1.6e-06 57.0 118 43.2
Gohir.D08G080500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 1.6e-06 57.0 121 40.5
Sc19g0004910 Simmondsia chinensis HOM05D007701 ORTHO05D006440 1.6e-06 57.0 111 43.2
BraA10t44152Z Brassica rapa HOM05D012083 ORTHO05D006440 2.1e-06 56.6 98 43.9
TPR.G16944 Trifolium pratense HOM05D007701 ORTHO05D006440 2.1e-06 56.6 86 45.3
Os01g0937900 Oryza sativa ssp. japonica HOM05D007701 ORTHO05D006440 2.7e-06 56.2 103 41.7
AL6G29970 Arabidopsis lyrata HOM05D012083 ORTHO05D006440 3.6e-06 55.8 90 41.1
Carub.0006s1699 Capsella rubella HOM05D012083 ORTHO05D006440 3.6e-06 55.8 118 39.8
Eucgr.K03437 Eucalyptus grandis HOM05D007701 ORTHO05D006440 3.6e-06 55.8 49 57.1
FAN07G1026 Fragaria x ananassa HOM05D016333 ORTHO05D006440 3.6e-06 55.8 100 45.0
Lalb_Chr02g0143101 Lupinus albus HOM05D007701 ORTHO05D006440 3.6e-06 55.8 100 44.0
BcaC04g18652 Brassica carinata HOM05D012083 ORTHO05D006440 8.0e-06 54.7 72 48.6
BcaC04g18653 Brassica carinata HOM05D012083 ORTHO05D006440 8.0e-06 54.7 72 48.6
C09p57760 Brassica napus HOM05D012083 ORTHO05D006440 8.0e-06 54.7 72 48.6
BolC9t58646H Brassica oleracea HOM05D012083 ORTHO05D006440 8.0e-06 54.7 72 48.6


User provided reference genes

Program Settings