Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 6.7e-246 853.6 434 100.0
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 3.9e-153 545.4 439 69.7
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 4.7e-151 538.5 432 66.7
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 3.8e-148 528.9 409 69.4
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.8e-143 512.7 446 63.9
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 4.2e-139 498.8 350 75.7
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 2.5e-136 489.6 446 62.1
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 9.6e-136 487.6 438 62.8
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.4e-134 483.0 427 64.2
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 5.4e-131 471.9 422 61.6
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 2.5e-128 463.0 434 59.4
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 2.6e-125 453.0 434 58.1
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 1.1e-120 437.6 440 56.6
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 5.3e-118 428.7 434 57.4
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 5.1e-113 412.1 439 56.7
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 1.9e-112 410.2 440 56.1
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.9e-112 410.2 424 54.5
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 7.4e-112 408.3 434 54.4
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.3e-111 407.5 440 53.9
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 2.9e-108 396.4 424 53.8
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.1e-107 394.4 438 53.4
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.4e-107 394.0 420 54.8
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.2e-106 391.0 440 51.4
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 3.3e-104 382.9 434 52.1
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 2.0e-101 373.6 448 50.9
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 2.6e-101 373.2 436 51.1
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 7.7e-101 371.7 506 45.8
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.7e-100 370.5 471 49.3
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.1e-99 367.9 434 49.3
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.4e-99 367.5 420 52.9
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 3.6e-98 362.8 462 50.0
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 5.1e-97 359.0 446 49.3
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 8.2e-95 351.7 438 49.8
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.2e-95 351.7 438 49.8
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 1.1e-94 351.3 447 46.8
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 1.4e-94 350.9 348 56.9
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 3.1e-94 349.7 439 51.3
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.2e-93 347.8 438 49.5
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 5.0e-92 342.4 435 46.9
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.5e-91 339.0 438 48.4
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 2.3e-89 333.6 438 48.2
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.9e-89 332.8 445 46.7
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 3.9e-89 332.8 434 46.3
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 6.7e-89 332.0 436 47.9
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.1e-88 331.3 434 45.2
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 2.0e-88 330.5 434 47.5
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 3.3e-88 329.7 427 46.4
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 2.0e-85 320.5 466 42.3
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.2e-82 311.2 437 46.7
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 1.0e-81 308.1 427 46.6
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 8.8e-81 305.1 421 46.1
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.5e-80 304.3 434 44.7
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 4.4e-80 302.8 347 50.7
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.1e-78 298.1 424 44.3
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 2.7e-77 293.5 407 43.5
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.1e-75 288.1 485 40.0
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.2e-74 284.6 349 49.3
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.7e-74 283.5 438 43.6
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 1.5e-72 277.7 497 38.8
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 7.5e-72 275.4 432 41.9
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 2.8e-71 273.5 331 49.2
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 4.1e-70 269.6 406 44.3
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.0e-68 265.0 234 63.7
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 5.0e-68 262.7 305 51.1
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.5e-67 261.2 418 43.5
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 5.2e-65 252.7 388 43.3
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 9.8e-64 248.4 269 53.5
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 4.9e-63 246.1 348 43.1
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 4.9e-63 246.1 439 39.9
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.1e-62 245.0 415 42.4
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 6.6e-60 235.7 368 42.1
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 8.9e-57 225.3 229 56.3
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.2e-56 224.9 360 41.9
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 1.6e-53 214.5 175 66.3
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 9.5e-51 205.3 174 59.8
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 3.6e-50 203.4 412 39.1
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 3.7e-47 193.4 259 45.2
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 5.4e-46 189.5 156 64.1
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 5.1e-44 183.0 393 37.2
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.2e-42 178.3 344 36.3
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 1.4e-41 174.9 350 34.9
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 5.2e-41 172.9 349 38.4
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.2e-40 171.8 166 53.0
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.6e-40 170.6 131 67.2
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 3.3e-35 153.7 452 32.1
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 2.4e-33 147.5 93 79.6
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 9.6e-27 125.6 402 31.6
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 6.0e-21 106.3 171 39.2
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 7.9e-21 105.9 363 29.5
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 1.1e-17 95.5 155 38.7
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 9.3e-14 82.4 83 53.0
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 1.6e-13 81.6 222 29.7
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.1e-10 71.2 155 33.5
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 2.6e-08 64.3 56 62.5
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 4.5e-08 63.5 51 62.7
HanXRQChr03g0080081 Helianthus annuus HOM05D007369 ORTHO05D009369 1.0e-07 62.4 258 27.9
Solyc01g067690.4 Solanum lycopersicum HOM05D007369 ORTHO05D051100 1.9e-06 58.2 58 53.4
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 7.1e-06 56.2 50 46.0


User provided reference genes

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