Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 6.5e-105 384.0 189 100.0
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 8.9e-62 240.7 167 67.7
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 3.2e-59 232.3 167 69.5
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.9e-56 223.0 173 66.5
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 3.6e-55 218.8 180 58.3
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 3.1e-54 215.7 156 64.1
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 5.2e-54 214.9 166 65.1
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 6.8e-54 214.5 178 60.7
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 3.7e-52 208.8 165 61.2
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 8.3e-52 207.6 167 60.5
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.4e-51 206.8 170 61.2
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.0e-49 199.1 167 59.9
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 6.6e-49 198.0 158 59.5
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.1e-48 197.2 162 61.7
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 3.3e-48 195.7 167 57.5
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 5.6e-48 194.9 147 66.7
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 1.2e-47 193.7 168 61.3
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.1e-46 190.7 180 52.2
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.4e-46 190.3 167 59.3
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 1.8e-46 189.9 171 59.1
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 4.0e-46 188.7 167 58.1
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 5.2e-46 188.3 167 54.5
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 6.8e-46 188.0 168 54.8
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 3.4e-45 185.7 158 58.2
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 3.4e-45 185.7 167 58.1
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 2.2e-44 183.0 174 53.4
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 2.2e-44 183.0 180 56.7
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.9e-44 182.6 169 56.8
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 3.8e-44 182.2 167 55.1
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 8.4e-44 181.0 157 59.2
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.4e-43 180.3 169 55.0
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 1.9e-43 179.9 157 55.4
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 2.4e-43 179.5 167 55.7
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 4.2e-43 178.7 157 59.2
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 7.1e-43 177.9 162 56.8
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 9.2e-43 177.6 161 52.2
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.2e-42 177.2 162 54.9
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 3.5e-42 175.6 180 50.0
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 3.5e-42 175.6 168 58.3
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 3.5e-42 175.6 167 55.1
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 4.6e-42 175.3 168 58.9
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 4.6e-42 175.3 180 51.7
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 2.3e-41 172.9 179 49.2
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 4.3e-40 168.7 159 53.5
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 7.3e-40 167.9 169 52.1
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.1e-39 166.4 176 48.3
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 6.2e-39 164.9 167 50.3
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.1e-38 164.1 158 53.2
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 1.4e-38 163.7 158 51.9
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 1.8e-38 163.3 161 50.3
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.3e-38 161.8 169 50.9
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 5.3e-38 161.8 146 54.1
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 6.9e-38 161.4 165 50.3
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.2e-37 160.6 167 49.1
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.2e-37 160.6 158 48.1
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 2.6e-37 159.5 158 50.6
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.3e-36 157.1 169 53.8
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.7e-36 156.8 163 49.1
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 2.9e-36 156.0 158 51.3
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 2.9e-36 156.0 158 51.3
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 3.8e-36 155.6 157 51.6
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 4.9e-36 155.2 164 50.0
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 4.9e-36 155.2 169 50.9
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 4.9e-36 155.2 169 49.7
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 4.9e-36 155.2 167 49.1
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 6.4e-36 154.8 158 50.6
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 6.4e-36 154.8 158 50.6
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.9e-35 153.3 158 50.6
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 3.2e-35 152.5 157 49.0
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 1.2e-34 150.6 158 46.2
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 1.2e-34 150.6 160 48.1
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 1.6e-34 150.2 158 49.4
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 2.1e-34 149.8 158 48.7
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.7e-34 149.4 157 51.0
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 2.7e-34 149.4 167 43.7
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 3.5e-34 149.1 167 43.7
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 4.6e-34 148.7 172 47.1
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 6.0e-34 148.3 170 50.6
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 7.8e-34 147.9 145 51.7
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 3.0e-33 146.0 158 48.1
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 6.6e-33 144.8 144 50.7
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 1.5e-32 143.7 158 46.8
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 2.5e-32 142.9 162 45.7
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 2.5e-32 142.9 159 47.8
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 3.3e-32 142.5 170 47.6
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 5.6e-32 141.7 174 41.4
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 5.6e-32 141.7 158 46.8
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 1.3e-31 140.6 157 49.0
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.1e-30 136.0 167 44.3
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 9.9e-29 131.0 170 40.6
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.3e-28 130.6 136 54.4
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 3.8e-28 129.0 93 67.7
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 8.4e-28 127.9 158 43.0
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 3.2e-27 125.9 157 45.9
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 2.7e-26 122.9 90 62.2
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 3.9e-25 119.0 97 59.8
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 6.7e-25 118.2 119 52.1
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 1.6e-23 113.6 111 50.5
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 3.1e-22 109.4 166 38.0
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 3.1e-22 109.4 117 52.1
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.9e-22 108.2 90 58.9
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 4.9e-20 102.1 127 43.3
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 1.4e-19 100.5 79 57.0
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 3.2e-19 99.4 178 33.7
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 2.1e-18 96.7 67 67.2
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 2.7e-18 96.3 72 63.9
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 5.1e-17 92.0 71 63.4
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 6.5e-12 75.1 71 52.1
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 8.4e-12 74.7 78 42.3
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 1.9e-11 73.6 71 50.7
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 1.2e-10 70.9 71 49.3
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 2.8e-07 59.7 70 45.7
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 8.2e-07 58.2 71 47.9
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 1.1e-06 57.8 57 42.1
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.8e-06 57.0 36 72.2


User provided reference genes

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