Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 2.2e-185 652.1 328 100.0
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 2.8e-172 608.6 328 93.0
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 6.9e-171 604.0 328 92.1
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.6e-170 602.1 328 91.8
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 5.1e-166 587.8 328 89.6
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 1.4e-163 579.7 328 88.1
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 3.2e-160 568.5 328 86.3
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 9.4e-160 567.0 328 85.7
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 2.7e-159 565.5 327 85.3
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 3.6e-159 565.1 328 85.4
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 3.6e-159 565.1 328 86.3
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 3.0e-158 562.0 328 85.1
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.1e-157 560.1 328 84.8
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 3.7e-156 555.1 328 83.2
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 2.4e-155 552.4 329 83.9
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 4.5e-154 548.1 328 84.1
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 7.7e-154 547.4 328 81.7
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.3e-153 546.6 328 82.6
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.7e-153 546.2 328 82.6
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 2.2e-153 545.8 328 82.6
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 2.9e-153 545.4 328 83.8
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.9e-153 545.4 328 82.9
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 2.9e-153 545.4 325 83.4
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 5.0e-153 544.7 328 82.6
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 8.5e-153 543.9 328 81.7
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.5e-152 543.1 328 83.2
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.5e-152 543.1 328 81.7
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 2.5e-152 542.3 328 81.1
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 5.5e-152 541.2 328 82.6
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 7.2e-152 540.8 328 82.0
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.0e-150 537.0 328 82.3
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.4e-150 536.6 328 81.7
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 3.4e-149 531.9 328 80.2
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 8.3e-148 527.3 328 80.2
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 4.1e-147 525.0 328 79.6
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 4.1e-147 525.0 328 79.0
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 7.0e-147 524.2 328 79.6
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-146 523.5 326 79.8
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 5.9e-146 521.2 328 79.0
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 5.9e-146 521.2 328 79.0
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 5.9e-146 521.2 329 79.9
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.3e-145 520.0 328 79.0
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.3e-145 520.0 328 79.0
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.3e-145 520.0 325 79.7
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 2.2e-145 519.2 328 78.7
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 8.5e-145 517.3 326 78.8
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.5e-144 516.5 330 78.8
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.5e-144 515.8 328 78.4
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.2e-143 513.5 330 78.2
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 3.6e-143 511.9 328 77.1
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 5.2e-142 508.1 328 76.8
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 8.8e-142 507.3 329 77.5
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 2.0e-141 506.1 328 76.8
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 7.5e-141 504.2 328 76.8
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.3e-140 503.4 328 75.9
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 1.7e-140 503.1 328 75.9
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 2.2e-140 502.7 328 75.9
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.8e-140 502.3 303 81.2
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 4.9e-140 501.5 328 75.3
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 6.3e-140 501.1 328 75.3
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 1.4e-139 500.0 328 75.9
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 2.4e-139 499.2 328 75.3
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 2.4e-139 499.2 328 77.1
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 4.1e-139 498.4 328 75.0
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 5.4e-139 498.0 328 74.7
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 3.5e-138 495.4 328 74.7
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 3.5e-138 495.4 328 75.0
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 4.5e-138 495.0 328 75.0
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.7e-137 493.0 328 74.1
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 2.9e-137 492.3 328 74.7
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 1.1e-136 490.3 328 74.7
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 3.3e-136 488.8 328 74.4
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 3.3e-136 488.8 328 74.4
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 4.3e-136 488.4 328 73.5
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 5.6e-136 488.0 328 74.4
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.8e-135 485.7 326 75.5
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 3.0e-134 482.3 328 72.3
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 6.8e-134 481.1 328 72.3
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.2e-133 480.3 328 71.6
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 3.4e-133 478.8 328 72.9
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.9e-130 468.0 326 73.3
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.6e-128 461.5 307 76.2
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 4.7e-127 458.4 325 68.6
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 8.0e-127 457.6 301 73.8
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.4e-126 456.8 307 74.9
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.3e-126 456.1 326 69.0
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 3.1e-126 455.7 328 68.0
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 6.8e-126 454.5 329 69.0
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 5.8e-125 451.4 328 69.8
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.5e-125 451.1 319 73.7
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 4.7e-119 431.8 327 64.2
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.8e-118 429.9 333 62.2
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 2.3e-113 412.9 265 77.7
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 8.6e-113 411.0 327 63.3
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.1e-110 404.1 328 63.7
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 9.9e-109 397.5 215 94.0
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 3.7e-108 395.6 323 59.1
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 4.9e-108 395.2 276 73.2
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.9e-107 393.3 326 61.0
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 2.1e-106 389.8 319 62.4
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 3.9e-105 385.6 325 57.5
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.8e-102 374.8 264 74.2
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.2e-101 374.0 335 54.3
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.2e-98 364.0 328 55.5
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 6.0e-98 361.7 236 77.1
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 6.6e-97 358.2 301 60.8
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 4.0e-94 349.0 324 51.5
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.6e-89 331.6 295 60.3
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.6e-89 331.6 313 59.1
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 2.8e-87 326.2 329 49.2
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.3e-84 317.4 293 57.0
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 8.7e-81 304.7 222 69.4
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 2.8e-63 246.5 305 48.5
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 5.0e-44 182.6 129 69.8
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 8.8e-41 171.8 121 68.6
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 3.5e-37 159.8 280 35.7
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-32 144.8 104 65.4
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 8.3e-31 138.7 124 58.1
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.6e-29 134.4 95 62.1
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.9e-28 130.2 115 57.4
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 3.8e-28 129.8 375 30.1
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.0e-26 122.1 104 59.6
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.4e-24 116.7 72 79.2
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 3.4e-24 116.7 62 85.5
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 3.5e-21 106.7 318 27.7
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 2.2e-15 87.4 62 64.5


User provided reference genes

Program Settings