Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38120 Davidia involucrata HOM05D000098 ORTHO05D185931 3.6e-101 371.7 204 100.0
Rhsim08G0213300 Rhododendron simsii HOM05D000098 ORTHO05D000546 1.6e-11 73.9 58 67.2
Rhsim08G0213500 Rhododendron simsii HOM05D000098 ORTHO05D000546 2.0e-11 73.6 58 67.2
Dinv30602 Davidia involucrata HOM05D000098 ORTHO05D000546 2.9e-10 69.7 70 58.6
vmacro18993 Vaccinium macrocarpon HOM05D000098 ORTHO05D000546 3.8e-10 69.3 63 57.1
TAR625G1110 Trochodendron aralioides HOM05D000098 ORTHO05D000546 1.5e-09 67.4 62 53.2
CSS0012219 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000546 3.2e-09 66.2 63 60.3
CSS0029760 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000546 3.2e-09 66.2 63 60.3
TAR625G1043 Trochodendron aralioides HOM05D000098 ORTHO05D000546 5.5e-09 65.5 47 66.0
TAR653G0002 Trochodendron aralioides HOM05D000098 ORTHO05D000546 5.5e-09 65.5 51 60.8
Actinidia15768 Actinidia chinensis HOM05D000098 ORTHO05D000546 9.4e-09 64.7 63 55.6
Lj5A72T17 Lonicera japonica HOM05D000098 ORTHO05D000546 1.6e-08 63.9 55 56.4
Actinidia01748 Actinidia chinensis HOM05D000098 ORTHO05D000546 8.0e-08 61.6 219 32.4
GSVIVG01017332001 Vitis vinifera HOM05D000098 ORTHO05D000546 8.0e-08 61.6 65 52.3
Haze_16553 Corylus avellana HOM05D000098 ORTHO05D000546 1.0e-07 61.2 56 55.4
Manes.11G056400 Manihot esculenta HOM05D000098 ORTHO05D000546 1.0e-07 61.2 54 53.7
TAR625G0390 Trochodendron aralioides HOM05D000098 ORTHO05D000546 1.8e-07 60.5 47 59.6
CiPaw.01G247400 Carya illinoinensis HOM05D000098 ORTHO05D000546 5.2e-07 58.9 64 46.9
Thecc.09G129300 Theobroma cacao HOM05D000098 ORTHO05D000546 5.2e-07 58.9 47 57.4
Cfa003399 Carpinus fangiana HOM05D000098 ORTHO05D000546 6.8e-07 58.5 53 54.7
Cc06_g08240 Coffea canephora HOM05D000098 ORTHO05D000546 6.8e-07 58.5 49 55.1
Hma1.2p1_1144F.1_g261250 Hydrangea macrophylla HOM05D000098 ORTHO05D000546 1.2e-06 57.8 225 31.6
CiPaw.01G247800 Carya illinoinensis HOM05D000098 ORTHO05D000546 2.0e-06 57.0 118 38.1
Ciclev10027144m.g Citrus clementina HOM05D000098 ORTHO05D000546 2.0e-06 57.0 71 43.7
Nn2g12069 Nelumbo nucifera HOM05D000098 ORTHO05D000546 2.0e-06 57.0 46 56.5
Lsat_1_v5_gn_5_96340 Lactuca sativa HOM05D000098 ORTHO05D000546 2.6e-06 56.6 46 54.3
HanXRQChr09g0241571 Helianthus annuus HOM05D000098 ORTHO05D000546 4.4e-06 55.8 49 51.0
Oeu031007.1 Olea europaea HOM05D000098 ORTHO05D000546 4.4e-06 55.8 56 46.4
Prupe.3G112300 Prunus persica HOM05D000098 ORTHO05D000546 4.4e-06 55.8 62 51.6
Dinv36501 Davidia involucrata HOM05D000098 ORTHO05D000546 5.7e-06 55.5 56 51.8
Ciclev10027232m.g Citrus clementina HOM05D000098 ORTHO05D000546 7.5e-06 55.1 65 43.1
PGR102G1091 Punica granatum HOM05D000098 ORTHO05D000546 7.5e-06 55.1 62 40.3
Thecc.06G022700 Theobroma cacao HOM05D000098 ORTHO05D000546 7.5e-06 55.1 64 50.0
TWI63G0803 Tripterygium wilfordii HOM05D000098 ORTHO05D000546 7.5e-06 55.1 49 49.0
Nitab4.5_0001349g0060 Nicotiana tabacum HOM05D000098 ORTHO05D000546 9.8e-06 54.7 62 45.2


User provided reference genes

Program Settings