Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 0.0e+00 1694.9 856 100.0
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 4.3e-79 300.4 380 47.4
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-78 298.1 410 47.1
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 1.6e-62 245.4 324 46.0
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 5.8e-60 236.9 345 45.2
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 5.4e-58 230.3 284 48.2
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 5.1e-56 223.8 282 49.6
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 7.6e-52 209.9 284 46.8
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 4.9e-51 207.2 407 38.1
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-49 202.6 334 41.3
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-45 189.1 366 37.2
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 4.0e-45 187.6 292 42.8
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-38 165.2 291 37.5
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 5.9e-36 157.1 316 35.8
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 1.3e-35 156.0 281 36.7
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 2.9e-35 154.8 282 36.5
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 5.0e-35 154.1 290 37.2
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 8.5e-35 153.3 261 41.0
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-34 152.1 427 31.4
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-34 151.0 262 39.7
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 6.7e-32 143.7 433 28.6
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 4.8e-30 137.5 269 36.1
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-29 136.3 428 31.8
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-29 135.6 320 34.4
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 3.4e-28 131.3 299 34.1
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 3.4e-28 131.3 199 41.7
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.2e-27 128.6 329 34.3
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 3.2e-26 124.8 332 31.9
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 5.5e-26 124.0 378 30.2
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 1.6e-25 122.5 224 35.7
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.8e-24 119.0 318 29.6
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 7.4e-23 113.6 290 31.7
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.2e-22 112.1 249 29.3
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 4.8e-22 110.9 266 32.0
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.1e-21 108.2 340 26.8
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.1e-21 107.8 154 41.6
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 9.1e-21 106.7 334 28.7
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.6e-20 105.1 162 36.4
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.3e-19 102.8 246 31.3
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 1.7e-19 102.4 147 41.5
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 5.0e-19 100.9 291 32.0
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.5e-19 100.5 321 29.0
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 2.5e-18 98.6 357 26.9
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-17 96.3 247 28.7
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.7e-17 94.4 250 32.4
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.7e-17 94.4 354 28.8
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-16 92.4 209 35.9
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 3.9e-16 91.3 164 33.5
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 2.6e-15 88.6 206 31.6
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.4e-15 87.8 217 30.9
Dinv21165 Davidia involucrata HOM05D008239 ORTHO05D009800 1.3e-14 86.3 98 48.0
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.1e-13 83.2 310 27.7
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.1e-13 81.3 217 33.2
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.6e-12 79.3 240 30.4
Dinv24381 Davidia involucrata HOM05D008239 ORTHO05D009800 2.0e-12 79.0 90 51.1
Rhsim13G0234400 Rhododendron simsii HOM05D008239 ORTHO05D009800 7.7e-12 77.0 210 30.5
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.9e-11 75.1 316 28.2
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.5e-11 73.6 264 25.4
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 2.5e-10 72.0 154 36.4
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.5e-10 72.0 212 30.7
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.2e-10 71.2 249 27.3
AL5G18670 Arabidopsis lyrata HOM05D007472 ORTHO05D009477 7.2e-10 70.5 300 25.3
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 1.2e-09 69.7 208 30.8
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 3.6e-09 68.2 226 32.3
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 6.1e-09 67.4 199 31.2
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 1.0e-08 66.6 204 30.4
AUR62020015 Chenopodium quinoa HOM05D023548 ORTHO05D009800 1.0e-08 66.6 204 30.4
Dinv20749 Davidia involucrata HOM05D018862 ORTHO05D009800 1.0e-08 66.6 299 26.4
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 4.0e-08 64.7 234 28.2
Ciclev10011009m.g Citrus clementina HOM05D007472 ORTHO05D009477 4.0e-08 64.7 151 35.1
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 6.7e-08 63.9 336 24.7
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 6.7e-08 63.9 243 29.6
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 8.8e-08 63.5 234 28.2
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 1.2e-07 63.2 217 30.4
Sp2g17510 Schrenkiella parvula HOM05D007472 ORTHO05D009477 1.5e-07 62.8 322 23.9
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 2.6e-07 62.0 107 31.8
COL.COLO4_27100 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.3e-07 61.6 206 27.7
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 4.4e-07 61.2 246 30.5
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 7.5e-07 60.5 273 27.5
A02p36140 Brassica napus HOM05D007472 ORTHO05D009477 1.3e-06 59.7 249 29.3
BraA02t08613Z Brassica rapa HOM05D007472 ORTHO05D009477 1.3e-06 59.7 249 29.3
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 2.2e-06 58.9 193 32.6
Gorai.001G238800 Gossypium raimondii HOM05D007472 ORTHO05D009477 2.2e-06 58.9 138 33.3
HanXRQChr05g0143021 Helianthus annuus HOM05D000047 ORTHO05D000044 2.2e-06 58.9 112 32.1
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 2.2e-06 58.9 190 31.6
CARHR151910 Cardamine hirsuta HOM05D007472 ORTHO05D009477 2.8e-06 58.5 318 25.5
COL.COLO4_24269 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.8e-06 58.5 153 30.7
Gohir.D07G211400 Gossypium hirsutum HOM05D007472 ORTHO05D009477 2.8e-06 58.5 135 33.3
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 2.8e-06 58.5 191 30.4
Rhsim03G0009800 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.8e-06 58.5 145 29.0
Gohir.A07G205200 Gossypium hirsutum HOM05D007472 ORTHO05D009477 3.7e-06 58.2 138 33.3
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 4.8e-06 57.8 191 30.9
Sc05g0008160 Simmondsia chinensis HOM05D000155 ORTHO05D000022 4.8e-06 57.8 171 27.5
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 6.3e-06 57.4 235 29.8
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 8.3e-06 57.0 210 28.1
PSO357G0437 Papaver somniferum HOM05D000047 ORTHO05D000044 8.3e-06 57.0 123 30.9


User provided reference genes

Program Settings