Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 1.3e-241 839.3 423 100.0
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 8.6e-81 305.1 327 52.6
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 7.8e-74 282.0 271 54.6
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 3.7e-68 263.1 352 44.6
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-62 244.2 260 50.0
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 2.6e-61 240.4 354 43.5
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 6.0e-58 229.2 247 52.6
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 3.9e-57 226.5 334 41.6
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 2.0e-53 214.2 315 42.5
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 3.8e-52 209.9 290 43.8
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 6.6e-49 199.1 286 41.6
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 8.7e-49 198.7 352 38.1
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 2.6e-45 187.2 366 37.2
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 4.9e-44 183.0 287 39.4
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 8.4e-44 182.2 289 38.8
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-43 181.8 322 36.0
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-43 181.4 301 40.2
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-43 181.0 274 42.0
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 1.4e-35 154.8 277 37.5
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.6e-34 151.4 311 34.1
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 9.0e-30 135.6 372 30.9
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-29 135.2 332 29.2
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 3.8e-28 130.2 310 33.2
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 5.5e-27 126.3 342 33.3
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 9.3e-27 125.6 337 32.0
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 6.1e-26 122.9 203 37.9
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 1.8e-25 121.3 332 31.3
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.8e-25 121.3 313 31.6
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 2.5e-24 117.5 329 28.0
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 2.8e-23 114.0 199 36.7
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.4e-22 111.7 292 30.5
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 5.3e-22 109.8 352 26.4
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.0e-21 107.8 274 31.4
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 2.0e-21 107.8 202 32.7
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.4e-21 107.1 290 31.4
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.9e-21 106.3 254 31.1
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 1.3e-20 105.1 286 31.1
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.5e-19 99.8 171 36.3
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-18 98.6 317 27.8
Carub.0005s0743 Capsella rubella HOM05D007472 ORTHO05D009477 2.3e-17 94.4 275 29.5
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.1e-17 93.2 285 29.1
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.8e-17 92.4 279 26.5
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.0e-16 91.3 261 26.1
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 4.3e-16 90.1 215 29.3
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 5.7e-16 89.7 188 32.4
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.7e-16 89.7 138 41.3
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.7e-15 87.0 186 35.5
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.8e-15 86.7 271 28.0
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 4.8e-15 86.7 217 30.9
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 8.2e-15 85.9 283 29.0
BcaB07g30111 Brassica carinata HOM05D007472 ORTHO05D009477 1.1e-14 85.5 193 33.7
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.4e-14 85.1 315 27.0
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 2.4e-14 84.3 218 27.1
BcaC03g17537 Brassica carinata HOM05D007472 ORTHO05D009477 3.1e-14 84.0 193 32.1
BolC2t11563H Brassica oleracea HOM05D007472 ORTHO05D009477 3.1e-14 84.0 193 32.1
A02p36140 Brassica napus HOM05D007472 ORTHO05D009477 4.1e-14 83.6 192 31.8
BraA02t08613Z Brassica rapa HOM05D007472 ORTHO05D009477 4.1e-14 83.6 192 31.8
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 4.1e-14 83.6 140 37.9
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.9e-14 82.8 245 29.8
C02p55120 Brassica napus HOM05D007472 ORTHO05D009477 1.2e-13 82.0 193 31.6
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-13 82.0 245 29.8
Dinv21165 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-13 81.6 84 48.8
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 1.5e-13 81.6 208 29.3
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 2.6e-13 80.9 216 29.2
DCAR_023498 Daucus carota HOM05D008239 ORTHO05D009800 2.6e-13 80.9 280 27.5
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 3.4e-13 80.5 198 31.8
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 3.4e-13 80.5 230 28.7
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 5.9e-13 79.7 273 27.5
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 7.7e-13 79.3 220 29.1
AL5G18670 Arabidopsis lyrata HOM05D007472 ORTHO05D009477 1.7e-12 78.2 257 25.7
CARHR151910 Cardamine hirsuta HOM05D007472 ORTHO05D009477 1.7e-12 78.2 190 28.9
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.7e-12 78.2 312 26.9
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 1.7e-12 78.2 206 34.5
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 1.7e-12 78.2 262 27.1
Sp2g17510 Schrenkiella parvula HOM05D007472 ORTHO05D009477 1.7e-12 78.2 259 26.6
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 2.2e-12 77.8 196 31.6
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 3.8e-12 77.0 169 33.1
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 3.8e-12 77.0 201 31.3
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 6.5e-12 76.3 268 26.9
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 6.5e-12 76.3 276 26.4
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 8.5e-12 75.9 277 24.5
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 8.5e-12 75.9 204 30.4
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 4.2e-11 73.6 262 25.6
EL10Ac2g02974 Beta vulgaris HOM05D007472 ORTHO05D009477 7.2e-11 72.8 221 29.4
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 7.2e-11 72.8 104 40.4
MD09G1050300 Malus domestica HOM05D007472 ORTHO05D009477 9.4e-11 72.4 265 24.5
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.2e-10 72.0 199 29.6
Thhalv10009510m.g Eutrema salsugineum HOM05D007472 ORTHO05D009477 1.2e-10 72.0 207 26.1
Dinv24381 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-10 71.2 84 45.2
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 4.7e-10 70.1 167 31.7
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 7.9e-10 69.3 269 25.3
QL04p014916 Quercus lobata HOM05D007472 ORTHO05D009477 1.8e-09 68.2 198 31.8
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 2.3e-09 67.8 206 27.2
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 2.3e-09 67.8 164 32.9
QL04p014554 Quercus lobata HOM05D007472 ORTHO05D009477 2.3e-09 67.8 198 31.8
Rhsim03G0009800 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.3e-09 67.8 275 24.4
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 6.7e-09 66.2 206 26.7
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 6.7e-09 66.2 156 30.8
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.5e-08 65.1 170 29.4
Rhsim04G0073200 Rhododendron simsii HOM05D059364 ORTHO05D009800 5.7e-08 63.2 178 27.0
Dinv20749 Davidia involucrata HOM05D018862 ORTHO05D009800 7.4e-08 62.8 281 25.3
Thhalv10003677m.g Eutrema salsugineum HOM05D007472 ORTHO05D009477 4.8e-07 60.1 262 25.2
Gohir.A07G205200 Gossypium hirsutum HOM05D007472 ORTHO05D009477 6.3e-07 59.7 199 26.6
Rhsim06G0198200 Rhododendron simsii HOM05D001108 ORTHO05D009800 8.2e-07 59.3 151 32.5
Ciclev10011009m.g Citrus clementina HOM05D007472 ORTHO05D009477 2.4e-06 57.8 186 24.2
COL.COLO4_24269 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.1e-06 57.0 148 31.8
AUR62030492 Chenopodium quinoa HOM05D025186 ORTHO05D009800 7.0e-06 56.2 195 28.2
Gohir.D07G211400 Gossypium hirsutum HOM05D007472 ORTHO05D009477 7.0e-06 56.2 199 26.1
Gorai.001G238800 Gossypium raimondii HOM05D007472 ORTHO05D009477 7.0e-06 56.2 199 26.1


User provided reference genes

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