Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 6.1e-88 327.4 159 100.0
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 2.7e-72 275.4 145 91.0
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 5.2e-71 271.2 146 88.4
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 6.8e-71 270.8 146 88.4
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 3.4e-70 268.5 146 87.0
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 4.4e-70 268.1 145 88.3
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 7.5e-70 267.3 145 87.6
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 7.5e-70 267.3 144 87.5
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 9.8e-70 266.9 146 86.3
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.3e-69 266.5 145 87.6
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.3e-69 266.5 145 87.6
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.3e-69 266.5 145 87.6
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 2.2e-69 265.8 146 87.0
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 2.8e-69 265.4 145 89.0
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 2.8e-69 265.4 145 86.9
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 3.7e-69 265.0 146 84.2
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 4.8e-69 264.6 146 86.3
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 4.8e-69 264.6 145 86.9
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 4.8e-69 264.6 146 86.3
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 8.3e-69 263.8 145 86.9
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 1.1e-68 263.5 145 86.2
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 1.1e-68 263.5 145 86.9
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 1.8e-68 262.7 145 86.2
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 3.1e-68 261.9 145 86.2
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 3.1e-68 261.9 145 85.5
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 4.1e-68 261.5 145 86.9
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 4.1e-68 261.5 145 86.2
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 5.4e-68 261.2 146 84.2
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 5.4e-68 261.2 145 86.2
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 5.4e-68 261.2 145 85.5
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 7.0e-68 260.8 145 86.9
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 7.0e-68 260.8 149 83.2
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 7.0e-68 260.8 144 84.7
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 9.1e-68 260.4 145 85.5
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 9.1e-68 260.4 145 84.1
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 1.2e-67 260.0 144 86.8
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 2.0e-67 259.2 146 82.2
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 2.0e-67 259.2 143 86.7
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 2.0e-67 259.2 145 85.5
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 2.0e-67 259.2 146 82.9
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 2.0e-67 259.2 145 84.8
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 3.5e-67 258.5 145 84.8
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 4.5e-67 258.1 146 85.6
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 4.5e-67 258.1 145 83.4
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 4.5e-67 258.1 146 82.9
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 4.5e-67 258.1 146 83.6
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 5.9e-67 257.7 146 82.9
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 5.9e-67 257.7 145 84.8
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 7.7e-67 257.3 149 81.9
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 7.7e-67 257.3 145 84.1
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 7.7e-67 257.3 145 84.1
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.3e-66 256.5 145 84.8
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.7e-66 256.1 145 84.8
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 1.7e-66 256.1 147 84.4
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 1.7e-66 256.1 145 84.1
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 2.2e-66 255.8 145 83.4
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 2.9e-66 255.4 146 82.9
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 6.5e-66 254.2 146 82.2
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 6.5e-66 254.2 146 84.9
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 6.5e-66 254.2 145 83.4
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 8.5e-66 253.8 145 82.8
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 1.5e-65 253.1 145 82.8
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.9e-65 252.7 145 83.4
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 1.9e-65 252.7 145 82.1
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 2.5e-65 252.3 151 81.5
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 2.5e-65 252.3 146 80.8
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 3.2e-65 251.9 146 83.6
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 3.2e-65 251.9 146 83.6
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.2e-65 251.9 145 83.4
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 3.2e-65 251.9 146 82.2
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 4.2e-65 251.5 146 82.2
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 4.2e-65 251.5 145 82.1
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 5.5e-65 251.1 146 82.9
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 5.5e-65 251.1 146 82.9
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 5.5e-65 251.1 146 82.9
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 5.5e-65 251.1 145 81.4
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 5.5e-65 251.1 145 83.4
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 5.5e-65 251.1 146 82.2
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 7.2e-65 250.8 146 82.2
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 7.2e-65 250.8 166 75.3
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 1.2e-64 250.0 146 82.2
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.2e-64 250.0 145 82.8
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 1.6e-64 249.6 146 82.2
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 2.1e-64 249.2 146 79.5
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 2.1e-64 249.2 149 79.9
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 2.7e-64 248.8 146 80.1
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 3.6e-64 248.4 145 80.0
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 4.7e-64 248.1 145 80.7
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 4.7e-64 248.1 153 77.8
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 4.7e-64 248.1 146 81.5
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 6.1e-64 247.7 146 80.8
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 6.1e-64 247.7 146 80.8
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 6.1e-64 247.7 144 81.2
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 8.0e-64 247.3 146 80.1
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 1.0e-63 246.9 144 81.2
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 1.4e-63 246.5 146 79.5
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 1.8e-63 246.1 149 78.5
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 2.3e-63 245.7 145 81.4
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 3.0e-63 245.4 145 83.4
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 4.0e-63 245.0 145 82.1
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 5.2e-63 244.6 146 78.8
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 8.8e-63 243.8 145 80.0
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 1.5e-62 243.0 145 80.7
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 1.5e-62 243.0 145 80.7
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 1.5e-62 243.0 145 80.0
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 2.0e-62 242.7 147 78.9
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 2.0e-62 242.7 145 80.0
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 2.0e-62 242.7 145 80.0
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 2.0e-62 242.7 146 80.1
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 3.4e-62 241.9 145 80.7
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 3.4e-62 241.9 145 80.7
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 4.4e-62 241.5 145 80.7
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 5.7e-62 241.1 146 79.5
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 9.8e-62 240.4 145 80.0
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 9.8e-62 240.4 146 79.5
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 1.3e-61 240.0 145 79.3
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 2.8e-61 238.8 145 77.9
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 6.3e-61 237.7 146 76.0
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 6.3e-61 237.7 149 76.5
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 2.4e-60 235.7 149 78.5
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 7.0e-60 234.2 145 77.2
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 7.0e-60 234.2 146 76.7
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.7e-59 232.3 145 80.0
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 8.6e-58 227.3 146 74.7
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 8.6e-58 227.3 176 65.9
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.7e-53 213.0 154 68.8
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 4.9e-53 211.5 148 70.9
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 6.3e-53 211.1 145 69.7
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 2.0e-51 206.1 144 69.4
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 1.7e-50 203.0 149 69.8
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 1.9e-49 199.5 146 65.8
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 2.5e-49 199.1 144 65.3
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 1.2e-48 196.8 144 62.5
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 1.6e-48 196.4 146 63.7
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 3.2e-44 182.2 156 60.9
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 6.6e-42 174.5 145 56.6
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 2.6e-38 162.5 154 60.4
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 5.4e-36 154.8 126 65.1
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 9.2e-36 154.1 145 53.1
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 1.7e-34 149.8 145 51.7
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 2.5e-33 146.0 82 82.9
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 4.4e-30 135.2 89 75.3
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 8.9e-23 110.9 67 74.6
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 9.6e-17 90.9 66 74.2
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 3.6e-16 89.0 71 54.9
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 3.1e-15 85.9 71 53.5
Glyma.15G221066 Glycine max HOM05D004738 ORTHO05D212055 3.4e-06 55.8 28 85.7
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 4.5e-06 55.5 31 71.0


User provided reference genes

Program Settings