Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 1.3e-204 716.1 343 100.0
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 5.2e-177 624.4 335 90.4
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 2.3e-169 599.0 340 86.5
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 9.8e-168 593.6 341 84.2
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.4e-166 589.7 341 84.8
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 1.7e-164 582.8 336 81.8
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 3.9e-164 581.6 335 83.9
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 1.9e-163 579.3 345 82.3
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 3.3e-163 578.6 348 81.3
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 1.4e-161 573.2 334 82.3
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.7e-159 566.2 342 82.5
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.9e-159 565.5 348 77.9
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 4.1e-158 561.6 342 79.2
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 4.1e-158 561.6 336 78.9
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 5.4e-158 561.2 345 78.6
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 5.4e-158 561.2 338 79.6
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 7.0e-158 560.8 338 79.9
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 9.2e-158 560.5 336 78.6
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 3.5e-157 558.5 335 81.2
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 3.5e-157 558.5 336 78.6
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 3.9e-156 555.1 347 76.1
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 3.3e-155 552.0 343 79.0
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 4.3e-155 551.6 344 76.5
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 4.3e-155 551.6 345 76.5
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 9.5e-155 550.4 340 77.9
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.6e-154 549.7 340 77.1
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 2.8e-154 548.9 340 78.2
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 4.7e-154 548.1 343 77.8
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 1.4e-153 546.6 340 78.2
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 2.0e-152 542.7 353 75.1
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.3e-151 540.0 338 74.6
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 1.7e-151 539.7 337 78.3
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 2.9e-151 538.9 346 76.0
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 3.7e-151 538.5 344 74.4
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 1.4e-150 536.6 348 76.4
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 4.1e-150 535.0 342 75.4
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 4.1e-150 535.0 346 75.4
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 1.2e-149 533.5 340 74.7
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 3.5e-149 531.9 418 65.3
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 7.8e-149 530.8 349 76.5
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 1.0e-148 530.4 343 74.1
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 1.0e-148 530.4 343 74.9
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 1.7e-148 529.6 343 74.9
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 3.0e-148 528.9 341 74.2
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 3.0e-148 528.9 358 72.9
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 3.9e-148 528.5 349 74.8
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 5.1e-148 528.1 357 72.0
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 6.6e-148 527.7 344 75.3
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 8.6e-148 527.3 343 74.6
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 1.9e-147 526.2 343 76.1
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 2.5e-147 525.8 343 74.1
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 2.5e-147 525.8 342 74.6
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 2.5e-147 525.8 343 73.8
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 3.3e-147 525.4 351 72.6
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 4.3e-147 525.0 349 75.6
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 5.6e-147 524.6 343 73.5
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 7.3e-147 524.2 356 73.3
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 9.5e-147 523.9 343 73.8
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 9.5e-147 523.9 340 75.0
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 9.5e-147 523.9 341 72.1
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 1.2e-146 523.5 338 75.4
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 1.6e-146 523.1 346 74.0
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 1.6e-146 523.1 344 74.4
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 6.2e-146 521.2 338 73.7
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 6.2e-146 521.2 352 72.4
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 8.1e-146 520.8 342 71.6
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.1e-145 520.4 316 77.2
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 2.4e-145 519.2 338 72.8
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 2.4e-145 519.2 344 75.6
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 2.4e-145 519.2 339 72.6
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 3.1e-145 518.8 341 71.3
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 3.1e-145 518.8 316 77.2
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 4.0e-145 518.5 348 72.1
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 5.2e-145 518.1 312 77.6
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 8.9e-145 517.3 343 73.8
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 1.5e-144 516.5 341 73.6
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 2.0e-144 516.2 302 80.5
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 2.6e-144 515.8 340 75.9
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 3.4e-144 515.4 343 74.3
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 3.4e-144 515.4 343 72.6
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 3.4e-144 515.4 350 72.6
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 5.8e-144 514.6 341 72.4
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 7.6e-144 514.2 342 72.2
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 7.6e-144 514.2 345 72.8
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 9.9e-144 513.8 316 76.9
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 2.2e-143 512.7 347 71.8
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.9e-143 512.3 316 76.6
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 3.8e-143 511.9 336 71.1
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 3.8e-143 511.9 316 76.3
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 3.8e-143 511.9 339 74.6
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 6.4e-143 511.1 358 70.9
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 6.4e-143 511.1 352 71.6
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 1.1e-142 510.4 336 73.5
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 1.4e-142 510.0 343 71.4
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 4.2e-142 508.4 348 73.9
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 5.4e-142 508.1 343 72.0
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 5.4e-142 508.1 343 71.1
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 5.4e-142 508.1 343 71.1
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 7.1e-142 507.7 349 72.2
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 1.2e-141 506.9 343 70.6
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 1.2e-141 506.9 341 73.3
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 1.2e-141 506.9 357 69.2
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 1.6e-141 506.5 343 70.8
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 3.5e-141 505.4 344 71.8
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 3.5e-141 505.4 344 71.8
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 4.6e-141 505.0 341 73.9
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 1.3e-140 503.4 344 71.8
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 5.1e-140 501.5 344 71.8
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.9e-139 499.6 338 72.5
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 1.9e-139 499.6 379 67.3
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 2.8e-138 495.7 272 83.8
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 6.2e-138 494.6 272 83.8
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 6.4e-135 484.6 338 70.7
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 1.4e-134 483.4 346 71.1
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 2.4e-134 482.6 340 69.4
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 2.1e-133 479.6 305 78.7
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 7.8e-133 477.6 290 75.9
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 4.0e-129 465.3 295 73.6
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 2.2e-127 459.5 347 66.9
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 1.5e-123 446.8 230 87.8
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 1.5e-123 446.8 331 67.4
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 3.3e-123 445.7 359 62.1
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 1.1e-121 440.7 230 87.8
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 6.9e-121 438.0 272 75.7
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 2.0e-120 436.4 252 81.0
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 2.1e-117 426.4 285 67.7
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 3.8e-111 405.6 338 63.0
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 6.3e-106 388.3 196 90.3
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.1e-105 387.5 196 88.8
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 1.7e-103 380.2 196 87.2
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.4e-100 370.5 243 65.4
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 4.1e-97 359.0 265 67.2
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 1.1e-94 350.9 193 79.8
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 1.2e-88 330.9 173 86.7
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 5.0e-87 325.5 286 54.5
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 9.1e-81 304.7 193 69.9
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.1e-77 293.5 251 52.6
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.4e-68 264.2 226 54.0
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 5.2e-68 262.3 179 70.4
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 6.8e-60 235.3 245 46.1
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 2.7e-56 223.4 109 91.7
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 2.7e-32 143.7 84 78.6
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.8e-32 142.1 84 77.4
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 1.5e-30 137.9 83 77.1
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 3.6e-29 133.3 80 75.0
HanXRQChr10g0311001 Helianthus annuus HOM05D004680 ORTHO05D005939 1.5e-14 84.7 111 45.9
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 3.1e-12 77.0 44 75.0
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 7.1e-09 65.9 44 63.6
QL11p016407 Quercus lobata HOM05D004680 ORTHO05D039099 2.7e-08 63.9 130 40.8
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.7e-08 63.9 34 79.4
Actinidia21694 Actinidia chinensis HOM05D014184 ORTHO05D015797 1.9e-06 57.8 48 68.8


User provided reference genes

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