Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 7.9e-55 216.9 109 100.0
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 1.4e-30 136.3 109 64.2
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 1.5e-29 132.9 111 64.9
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 1.3e-28 129.8 106 64.2
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 1.1e-27 126.7 116 62.1
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 1.1e-27 126.7 109 61.5
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 1.4e-27 126.3 111 63.1
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 4.1e-27 124.8 112 59.8
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 7.0e-27 124.0 111 58.6
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 9.1e-27 123.6 115 60.9
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 2.3e-25 119.0 110 56.4
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 2.3e-25 119.0 111 59.5
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 2.9e-25 118.6 116 58.6
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 3.8e-25 118.2 112 58.9
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 3.8e-25 118.2 111 57.7
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 6.5e-25 117.5 114 62.3
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 3.3e-24 115.2 111 55.0
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 4.2e-24 114.8 112 58.9
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 9.5e-24 113.6 113 53.1
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.8e-23 112.1 114 54.4
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 3.6e-23 111.7 113 54.9
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 4.7e-23 111.3 110 54.5
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 8.0e-23 110.5 110 56.4
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.0e-22 110.2 113 54.9
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.8e-22 109.4 113 54.0
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 1.2e-21 106.7 108 57.4
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 2.0e-21 105.9 106 55.7
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 2.6e-21 105.5 113 55.8
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 3.4e-21 105.1 119 50.4
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 8.3e-20 100.5 158 41.1
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 3.1e-19 98.6 109 47.7
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 7.0e-19 97.4 113 50.4
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 1.6e-18 96.3 121 47.1
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 2.0e-18 95.9 117 51.3
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 4.5e-18 94.7 115 51.3
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 1.7e-17 92.8 113 52.2
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 6.6e-17 90.9 111 48.6
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 1.1e-16 90.1 111 47.7
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.5e-16 89.7 112 49.1
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 2.5e-16 89.0 120 50.0
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 2.5e-16 89.0 112 46.4
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 2.5e-16 89.0 106 50.0
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 1.2e-15 86.7 115 43.5
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 2.8e-15 85.5 111 49.5
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 2.8e-15 85.5 55 74.5
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 3.6e-15 85.1 98 46.9
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 3.6e-15 85.1 112 48.2
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 6.1e-15 84.3 115 49.6
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 1.0e-14 83.6 119 42.9
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 1.4e-14 83.2 112 45.5
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 1.8e-14 82.8 114 49.1
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 5.2e-14 81.3 99 49.5
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 8.9e-14 80.5 99 49.5
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 2.0e-13 79.3 111 44.1
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 4.4e-13 78.2 99 48.5
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 7.5e-13 77.4 109 45.0
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 7.5e-13 77.4 111 44.1
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 1.3e-12 76.6 101 41.6
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 2.9e-12 75.5 112 44.6
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 6.4e-12 74.3 91 52.7
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 6.4e-12 74.3 112 45.5
MBI04_g06582_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.4e-11 73.2 91 46.2
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 2.4e-11 72.4 56 67.9
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 3.2e-11 72.0 104 43.3
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 5.4e-11 71.2 104 43.3
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 7.0e-11 70.9 56 62.5
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 1.6e-10 69.7 111 39.6
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 2.0e-10 69.3 110 41.8
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 2.0e-10 69.3 111 41.4
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 2.0e-10 69.3 112 43.8
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 2.7e-10 68.9 109 42.2
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 1.2e-07 60.1 104 38.5
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 1.6e-07 59.7 104 38.5
MBI17_g05503_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.6e-07 59.7 65 47.7
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 5.2e-06 54.7 108 38.9


User provided reference genes

Program Settings