Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 1.1e-278 962.6 468 100.0
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 4.6e-192 674.9 420 77.9
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 4.6e-192 674.9 425 76.5
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 2.3e-191 672.5 420 78.3
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 8.6e-191 670.6 417 78.9
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 1.1e-190 670.2 418 78.0
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 1.5e-190 669.8 426 77.2
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 1.5e-190 669.8 418 78.2
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 2.5e-190 669.1 416 79.1
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 3.3e-190 668.7 419 76.6
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 4.3e-190 668.3 408 79.2
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 9.5e-190 667.2 425 76.7
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 2.1e-189 666.0 415 78.3
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 4.7e-189 664.8 420 77.4
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 4.0e-188 661.8 419 78.3
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 2.0e-187 659.4 439 74.7
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 2.0e-187 659.4 430 75.1
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 4.4e-187 658.3 413 77.7
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 4.4e-187 658.3 431 74.5
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 5.8e-187 657.9 418 77.0
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 7.5e-187 657.5 433 74.6
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 1.3e-186 656.8 419 77.1
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 1.7e-186 656.4 424 76.2
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 4.9e-186 654.8 418 76.8
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 1.4e-185 653.3 425 73.6
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 5.4e-185 651.4 419 75.9
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 7.1e-185 651.0 420 75.7
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 7.1e-185 651.0 419 75.9
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 4.6e-184 648.3 417 75.8
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 7.8e-184 647.5 418 73.9
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 1.0e-183 647.1 417 76.0
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 1.0e-183 647.1 451 71.6
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 3.9e-183 645.2 431 72.2
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 5.1e-183 644.8 418 73.9
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 5.6e-182 641.3 420 75.0
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 9.5e-182 640.6 426 73.2
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 1.2e-181 640.2 405 77.3
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 1.6e-181 639.8 420 73.6
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 3.6e-181 638.6 431 72.9
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 1.8e-180 636.3 420 76.7
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 1.2e-179 633.6 418 73.9
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 1.5e-179 633.3 437 70.3
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 2.0e-179 632.9 422 73.0
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 2.6e-179 632.5 416 73.1
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 5.8e-179 631.3 421 72.7
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 9.9e-179 630.6 420 74.5
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 9.9e-179 630.6 418 73.7
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 1.3e-178 630.2 420 71.0
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 4.9e-178 628.2 422 72.5
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 6.4e-178 627.9 421 73.6
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.1e-177 627.1 428 70.8
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.4e-177 626.7 409 74.8
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 1.9e-177 626.3 421 73.4
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 2.4e-177 625.9 421 73.4
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 3.2e-177 625.5 452 67.9
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 4.2e-177 625.2 434 73.0
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 5.4e-177 624.8 421 73.2
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 7.1e-177 624.4 412 71.8
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.6e-176 623.2 423 72.3
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 2.1e-176 622.9 421 73.2
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 6.0e-176 621.3 418 71.8
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 1.0e-175 620.5 430 70.7
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 6.6e-175 617.8 421 72.2
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 1.5e-174 616.7 423 71.9
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 4.3e-174 615.1 421 70.1
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 7.3e-174 614.4 416 72.6
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 7.3e-174 614.4 409 72.6
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 9.6e-174 614.0 417 72.7
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 9.6e-174 614.0 406 73.2
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 1.3e-173 613.6 420 71.7
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 4.8e-173 611.7 416 73.1
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 4.8e-173 611.7 418 71.8
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 6.2e-173 611.3 416 71.6
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 8.1e-173 610.9 416 72.1
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 8.1e-173 610.9 420 70.5
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 8.1e-173 610.9 418 71.1
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 1.4e-172 610.1 416 71.2
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 4.0e-172 608.6 416 71.6
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 4.0e-172 608.6 416 72.6
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 4.0e-172 608.6 416 72.6
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.0e-172 608.6 420 70.2
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 4.0e-172 608.6 436 68.8
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 5.3e-172 608.2 414 70.5
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 5.3e-172 608.2 418 70.6
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 9.0e-172 607.4 417 71.5
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 5.8e-171 604.7 432 68.5
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 9.9e-171 604.0 444 68.0
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 4.9e-170 601.7 436 67.9
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 4.9e-170 601.7 423 69.7
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 2.4e-169 599.4 432 67.8
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 3.2e-169 599.0 422 69.4
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.6e-168 596.7 417 70.5
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.6e-168 596.7 417 70.5
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 1.1e-166 590.5 415 68.9
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.5e-166 589.3 415 68.0
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 7.3e-166 587.8 428 67.1
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 6.9e-164 581.3 423 67.4
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 2.2e-162 576.2 406 69.2
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 9.3e-161 570.9 424 64.6
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.6e-160 568.5 422 68.0
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 6.2e-157 558.1 416 67.3
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 4.0e-156 555.4 417 64.5
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 6.9e-156 554.7 424 64.6
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 5.8e-155 551.6 419 63.5
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 1.0e-154 550.8 419 65.9
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 1.9e-150 536.6 418 63.6
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 3.7e-149 532.3 405 63.7
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 4.0e-148 528.9 421 62.0
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 4.5e-147 525.4 416 63.2
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.7e-146 523.5 425 62.1
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 2.7e-144 516.2 417 59.7
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 6.1e-144 515.0 360 71.4
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 7.9e-144 514.6 455 56.5
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 7.9e-144 514.6 417 60.4
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 1.8e-143 513.5 416 58.4
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 3.3e-142 509.2 416 57.7
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 4.8e-133 478.8 411 57.2
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 5.9e-131 471.9 406 59.9
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.9e-130 469.5 394 58.1
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 9.4e-121 438.0 432 52.8
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 7.4e-118 428.3 313 68.4
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 1.7e-114 417.2 406 53.4
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 7.2e-113 411.8 298 67.4
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.7e-109 399.4 412 53.9
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 2.4e-108 396.7 413 53.0
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 2.0e-107 393.7 416 46.9
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 1.7e-106 390.6 432 46.5
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.2e-104 384.4 264 70.1
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.3e-101 372.1 340 54.7
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 2.8e-96 356.7 405 44.0
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 6.6e-90 335.5 241 70.5
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 1.5e-89 334.3 227 71.8
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 3.6e-88 329.7 262 65.6
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.1e-81 308.1 285 54.4
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 5.8e-62 242.7 154 74.0
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.8e-54 216.1 308 40.6
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.4e-52 211.5 137 70.1
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 9.6e-49 198.7 130 68.5
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 1.4e-47 194.9 113 76.1
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 1.2e-46 191.8 160 59.4
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 6.0e-43 179.5 147 63.9
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 4.0e-39 166.8 114 71.9
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 1.2e-38 165.2 125 68.0
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.5e-38 163.3 210 46.2
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 9.3e-36 155.6 400 27.5
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 3.5e-35 153.7 141 60.3
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 9.0e-23 112.5 92 65.2
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 6.5e-21 106.3 80 67.5
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 6.5e-21 106.3 80 68.8
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 4.2e-20 103.6 83 65.1
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.0e-18 99.0 73 68.5
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 2.3e-18 97.8 73 69.9
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 5.1e-18 96.7 82 57.3
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.7e-16 91.7 85 51.8
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 3.1e-15 87.4 68 63.2
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.9e-15 86.3 152 32.9
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 5.0e-13 80.1 61 63.9
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 8.5e-13 79.3 42 85.7
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-12 79.0 62 69.4
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 1.4e-10 72.0 106 39.6
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 1.7e-08 65.1 58 62.1
Cpa.g.c45316 Carica papaya HOM05D004203 ORTHO05D004830 6.3e-08 63.2 42 71.4
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-07 62.0 55 61.8
SEGI_15796 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.4e-07 61.2 76 40.8
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 7.0e-07 59.7 47 61.7


User provided reference genes

Program Settings