Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 0.0e+00 1312.0 661 100.0
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 0.0e+00 1102.4 661 83.7
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 0.0e+00 1095.9 619 88.5
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 0.0e+00 1088.6 662 82.3
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 0.0e+00 1079.3 658 81.5
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.5e-302 1042.3 664 78.5
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 4.5e-302 1040.8 662 78.7
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 1.1e-300 1036.2 661 77.0
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 4.2e-300 1034.2 662 77.5
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 1.6e-296 1022.3 655 76.6
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 1.1e-295 1019.6 655 76.5
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 7.7e-294 1013.4 653 78.3
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 1.7e-293 1012.3 650 76.6
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 1.7e-293 1012.3 650 77.4
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.1e-291 1005.4 654 76.0
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 2.7e-291 1005.0 654 75.5
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 3.6e-291 1004.6 654 77.2
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 1.5e-289 999.2 654 75.5
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 1.3e-288 996.1 654 76.1
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 2.2e-285 985.3 656 74.5
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 1.4e-284 982.6 656 74.5
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 4.7e-283 977.6 648 74.7
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 7.9e-283 976.9 651 74.7
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 5.1e-282 974.2 665 73.4
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 2.6e-281 971.8 656 73.6
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 1.4e-279 966.1 661 72.5
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 1.5e-278 962.6 643 73.7
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 2.0e-278 962.2 669 73.2
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 4.5e-278 961.1 654 71.7
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 4.5e-278 961.1 671 72.7
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 5.9e-278 960.7 655 72.2
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 3.8e-277 958.0 650 73.4
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 6.5e-277 957.2 648 74.1
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 4.2e-276 954.5 658 72.3
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 5.5e-276 954.1 667 72.4
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 9.4e-276 953.4 660 73.6
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 2.1e-275 952.2 665 73.2
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 4.7e-275 951.0 661 72.3
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 8.0e-275 950.3 661 72.0
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 8.0e-275 950.3 665 72.6
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 1.0e-274 949.9 662 72.7
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 1.8e-274 949.1 652 71.8
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 5.2e-274 947.6 661 70.8
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 6.7e-274 947.2 658 71.7
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.1e-273 946.4 658 72.0
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 2.0e-273 945.7 655 71.1
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 9.7e-273 943.3 650 72.8
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 9.7e-273 943.3 654 73.2
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 8.2e-272 940.3 653 71.1
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 1.7e-269 932.6 669 70.6
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 1.7e-269 932.6 645 72.4
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 4.2e-268 927.9 654 70.3
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 7.2e-268 927.2 670 70.7
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 9.4e-268 926.8 655 71.0
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 1.2e-267 926.4 666 72.2
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 3.4e-265 918.3 655 70.5
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 3.7e-264 914.8 664 71.1
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 4.1e-263 911.4 581 76.8
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 9.1e-263 910.2 667 68.5
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 5.5e-260 901.0 652 69.0
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 7.2e-260 900.6 664 67.8
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 8.0e-259 897.1 648 68.4
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 8.0e-259 897.1 648 68.4
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 1.8e-258 896.0 648 70.2
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 4.0e-258 894.8 648 68.2
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 1.5e-257 892.9 660 67.0
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 9.8e-257 890.2 671 66.5
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 6.3e-256 887.5 648 68.4
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 1.8e-255 885.9 648 67.7
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 7.0e-255 884.0 655 67.9
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 9.1e-255 883.6 648 67.3
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 1.2e-254 883.2 648 68.1
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 1.7e-253 879.4 648 67.3
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 2.9e-253 878.6 671 67.1
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 2.9e-253 878.6 660 67.0
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 1.1e-252 876.7 525 84.4
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 1.2e-251 873.2 616 70.6
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 4.1e-247 858.2 651 68.0
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 3.3e-244 848.6 650 66.8
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 2.3e-242 842.4 645 65.9
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 1.2e-241 840.1 645 65.7
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 3.4e-241 838.6 660 66.1
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 5.8e-241 837.8 659 63.3
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 3.7e-240 835.1 659 63.1
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 1.9e-239 832.8 645 65.4
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 3.3e-236 822.0 645 64.7
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 1.2e-233 813.5 688 62.4
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 2.0e-233 812.8 646 64.2
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 9.2e-223 777.3 562 68.1
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 2.6e-217 759.2 650 62.3
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 1.4e-210 736.9 652 61.2
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 1.2e-209 733.8 630 61.3
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 9.3e-207 724.2 687 57.2
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 2.3e-205 719.5 554 67.3
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 1.5e-196 690.3 656 58.2
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 1.1e-194 684.1 627 59.0
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.9e-180 636.7 654 55.5
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 8.2e-179 631.3 507 64.3
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 2.6e-177 626.3 442 69.9
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 4.1e-170 602.4 575 57.0
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 3.2e-167 592.8 660 49.2
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 1.3e-160 570.9 658 46.8
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 5.9e-153 545.4 668 45.1
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 3.8e-152 542.7 651 44.7
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 3.9e-128 463.0 634 40.1
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 1.1e-87 328.6 336 53.3
FAN14G1222 Fragaria x ananassa HOM05D005721 ORTHO05D006758 2.5e-87 327.4 223 69.5
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 3.8e-51 207.2 288 44.1
FvH4_6g32370 Fragaria vesca HOM05D005721 ORTHO05D006758 6.5e-51 206.5 143 67.8
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 3.6e-49 200.7 156 66.7
arahy.Tifrunner.gnm1.ann1.402B9T Arachis hypogaea HOM05D005721 ORTHO05D006758 1.8e-48 198.4 351 35.0
Zm00001eb344360 Zea mays HOM05D005721 ORTHO05D006758 1.5e-47 195.3 120 77.5
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 5.3e-45 186.8 160 61.9
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 3.0e-40 171.0 123 65.0
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 4.0e-40 170.6 155 60.0
Zm00001eb192810 Zea mays HOM05D005721 ORTHO05D006758 1.2e-39 169.1 110 78.2
Glyma.16G086100 Glycine max HOM05D005721 ORTHO05D006758 1.5e-39 168.7 107 75.7
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.6e-39 167.9 155 58.1
Glyma.16G136400 Glycine max HOM05D005721 ORTHO05D006758 1.3e-38 165.6 107 74.8
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 1.3e-38 165.6 131 62.6
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 4.5e-36 157.1 353 30.0
Zm00001eb419420 Zea mays HOM05D005721 ORTHO05D006758 2.5e-34 151.4 94 78.7
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 2.8e-30 137.9 83 78.3
Glyma.12G149950 Glycine max HOM05D005721 ORTHO05D006758 7.0e-29 133.3 85 74.1
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 1.6e-28 132.1 80 78.8
arahy.Tifrunner.gnm1.ann1.F8M988 Arachis hypogaea HOM05D005721 ORTHO05D006758 2.7e-28 131.3 100 65.0
Glyma.09G112900 Glycine max HOM05D005721 ORTHO05D006758 3.6e-25 120.9 100 60.0
arahy.Tifrunner.gnm1.ann1.SY3941 Arachis hypogaea HOM05D005721 ORTHO05D006758 6.8e-24 116.7 92 64.1
COL.COLO4_30597 Corchorus olitorius HOM05D005721 ORTHO05D006758 5.7e-23 113.6 88 64.8
Cfa026500 Carpinus fangiana HOM05D005721 ORTHO05D006758 2.5e-18 98.2 478 23.6
HanXRQChr05g0131511 Helianthus annuus HOM05D005721 ORTHO05D006758 1.2e-15 89.4 89 55.1
HanXRQChr09g0276291 Helianthus annuus HOM05D005721 ORTHO05D006758 1.5e-15 89.0 48 85.4
arahy.Tifrunner.gnm1.ann1.EXE9LQ Arachis hypogaea HOM05D005721 ORTHO05D006758 1.7e-14 85.5 56 69.6
Glyma.19G071451 Glycine max HOM05D005721 ORTHO05D006758 2.4e-13 81.6 54 72.2
MCO06G118 Micromonas commoda HOM05D005721 ORTHO05D006758 5.9e-12 77.0 202 26.7
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 6.4e-06 57.0 55 52.7


User provided reference genes

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