Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 1.1e-90 336.7 167 100.0
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 4.0e-50 201.8 162 61.1
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.2e-49 200.3 165 64.8
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 6.5e-48 194.5 162 63.0
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.2e-46 190.3 162 59.9
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 4.3e-44 181.8 162 58.0
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.2e-43 179.5 162 56.2
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 6.9e-42 174.5 162 58.0
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 9.0e-42 174.1 162 59.3
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 2.6e-41 172.6 166 57.8
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 5.9e-41 171.4 160 57.5
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 2.2e-40 169.5 161 59.0
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 5.0e-40 168.3 163 57.1
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 2.5e-39 166.0 163 54.0
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 3.9e-37 158.7 178 48.3
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 6.9e-34 147.9 164 50.6
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.5e-33 146.7 167 49.7
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.0e-33 146.4 163 47.9
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 2.6e-33 146.0 162 48.8
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 2.6e-33 146.0 162 49.4
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 4.5e-33 145.2 167 49.7
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.3e-32 143.7 168 52.4
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 2.2e-32 142.9 162 50.0
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 3.8e-32 142.1 167 47.9
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 6.5e-32 141.4 164 46.3
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 1.4e-31 140.2 162 48.1
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.4e-31 140.2 163 49.1
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 1.9e-31 139.8 169 49.7
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 2.5e-31 139.4 164 45.7
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 5.5e-31 138.3 166 49.4
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 1.2e-30 137.1 163 49.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 2.7e-30 136.0 164 45.7
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 6.1e-30 134.8 162 46.9
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 6.1e-30 134.8 159 49.7
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.0e-29 134.0 163 45.4
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 1.0e-29 134.0 163 47.9
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.4e-29 133.7 163 48.5
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.8e-29 133.3 174 45.4
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 3.9e-29 132.1 162 45.7
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 5.1e-29 131.7 162 43.8
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 6.7e-29 131.3 164 43.3
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 8.8e-29 131.0 162 46.9
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 8.8e-29 131.0 164 47.0
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.1e-28 130.6 167 47.9
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 1.1e-28 130.6 161 49.1
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 2.6e-28 129.4 163 47.2
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 2.6e-28 129.4 164 43.9
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 3.3e-28 129.0 163 44.8
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 5.7e-28 128.3 162 45.7
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 5.7e-28 128.3 162 45.7
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 9.7e-28 127.5 162 46.3
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 9.7e-28 127.5 174 43.1
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 3.7e-27 125.6 165 44.8
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 4.8e-27 125.2 163 43.6
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.8e-26 123.2 165 44.2
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.8e-26 123.2 164 46.3
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 3.1e-26 122.5 162 46.3
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 4.1e-26 122.1 163 44.2
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 4.1e-26 122.1 162 40.7
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.5e-25 120.2 163 45.4
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.5e-25 120.2 165 45.5
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 2.0e-25 119.8 164 45.1
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 2.6e-25 119.4 163 40.5
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 7.7e-25 117.9 162 40.1
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 7.7e-25 117.9 163 44.2
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.2e-24 116.3 163 39.9
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 2.9e-24 115.9 163 44.8
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.9e-24 115.9 163 44.8
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.9e-24 115.9 163 44.8
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 2.9e-24 115.9 167 40.7
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.4e-23 113.6 126 49.2
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.5e-23 112.8 163 43.6
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 3.2e-23 112.5 164 43.3
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 4.2e-23 112.1 163 43.6
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 3.6e-22 109.0 163 39.9
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 1.4e-21 107.1 163 42.3
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 3.0e-21 105.9 110 50.9
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 3.0e-21 105.9 163 38.0
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 1.1e-20 104.0 174 39.1
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 2.0e-20 103.2 184 38.0
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 2.6e-20 102.8 163 39.9
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 1.3e-19 100.5 163 40.5
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.2e-19 99.8 164 39.6
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 3.7e-19 99.0 76 64.5
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 8.2e-19 97.8 166 39.2
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 1.1e-18 97.4 163 40.5
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.8e-18 96.7 166 39.2
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 1.8e-18 96.7 164 39.0
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.2e-17 94.0 163 38.0
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 2.9e-16 89.4 145 37.9
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 6.3e-11 71.6 184 31.0
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 1.8e-10 70.1 161 32.9
Actinidia39108 Actinidia chinensis HOM05D007444 ORTHO05D009359 3.5e-09 65.9 134 35.1
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 2.2e-08 63.2 117 33.3
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.9e-07 60.1 199 29.1


User provided reference genes

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