Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 1.3e-70 269.6 138 100.0
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 3.3e-58 228.4 147 85.0
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 5.0e-46 188.0 147 70.7
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 1.6e-44 183.0 144 69.4
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 2.1e-44 182.6 145 71.7
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 2.1e-44 182.6 146 70.5
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 1.8e-43 179.5 144 68.1
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 4.0e-43 178.3 147 66.7
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 5.2e-43 177.9 144 68.1
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 8.8e-43 177.2 146 69.2
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 5.7e-42 174.5 146 67.8
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 9.8e-42 173.7 158 65.2
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 9.8e-42 173.7 145 67.6
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 2.8e-41 172.2 146 65.8
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.8e-41 172.2 146 65.8
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 4.8e-41 171.4 145 66.2
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 8.3e-41 170.6 168 61.9
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.1e-40 168.7 146 64.4
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 3.1e-40 168.7 146 65.1
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 7.0e-40 167.5 146 65.1
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 9.1e-40 167.2 147 66.0
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.6e-39 166.4 146 64.4
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.0e-39 166.0 146 63.7
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 3.5e-39 165.2 144 61.8
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 3.5e-39 165.2 146 65.1
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 5.9e-39 164.5 146 64.4
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.3e-38 163.3 140 66.4
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 1.7e-38 162.9 150 64.0
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 6.5e-38 161.0 140 65.7
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 1.1e-37 160.2 149 62.4
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.5e-37 159.8 145 62.8
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 3.2e-37 158.7 145 62.1
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 3.2e-37 158.7 142 64.1
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 4.2e-37 158.3 145 61.4
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 5.5e-37 157.9 145 61.4
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 7.2e-37 157.5 153 60.8
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 1.6e-36 156.4 142 65.5
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 2.1e-36 156.0 144 61.8
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 3.6e-36 155.2 138 63.8
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.0e-35 153.7 145 60.0
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 1.4e-35 153.3 145 59.3
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 3.0e-35 152.1 141 61.0
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 3.0e-35 152.1 142 62.0
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 3.0e-35 152.1 142 62.0
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 4.0e-35 151.8 149 61.7
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 5.2e-35 151.4 140 60.7
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 8.8e-35 150.6 148 60.8
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 1.5e-34 149.8 145 60.7
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 2.0e-34 149.4 151 58.9
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 2.6e-34 149.1 146 60.3
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 7.5e-34 147.5 147 57.8
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 7.5e-34 147.5 143 60.8
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 1.3e-33 146.7 151 58.9
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 1.7e-33 146.4 140 60.7
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 2.8e-33 145.6 141 58.9
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 2.8e-33 145.6 138 60.1
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 3.7e-33 145.2 147 59.2
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 3.7e-33 145.2 147 59.2
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 3.7e-33 145.2 132 63.6
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 3.7e-33 145.2 148 56.8
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 4.9e-33 144.8 148 57.4
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 6.3e-33 144.4 148 57.4
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 1.4e-32 143.3 92 81.5
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 1.8e-32 142.9 147 55.1
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 3.1e-32 142.1 142 57.7
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 3.1e-32 142.1 140 58.6
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 3.1e-32 142.1 146 57.5
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 9.1e-32 140.6 148 53.4
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 9.1e-32 140.6 126 61.9
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 1.6e-31 139.8 148 56.8
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 1.6e-31 139.8 153 54.9
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 1.6e-31 139.8 140 59.3
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 2.0e-31 139.4 148 57.4
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 2.0e-31 139.4 136 57.4
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 2.0e-31 139.4 130 59.2
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 2.7e-31 139.0 148 58.1
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 2.7e-31 139.0 148 58.1
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 3.5e-31 138.7 148 57.4
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 4.5e-31 138.3 137 57.7
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 5.9e-31 137.9 147 56.5
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 5.9e-31 137.9 149 56.4
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 7.7e-31 137.5 138 58.7
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.0e-30 137.1 148 57.4
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 1.0e-30 137.1 144 54.9
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 1.3e-30 136.7 144 54.2
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 2.9e-30 135.6 125 62.4
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 2.9e-30 135.6 126 62.7
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 1.1e-29 133.7 123 59.3
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 4.2e-29 131.7 152 55.9
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 4.2e-29 131.7 141 58.2
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 5.5e-29 131.3 149 56.4
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 4.7e-28 128.3 158 51.3
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 1.0e-27 127.1 169 50.3
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 4.0e-27 125.2 123 56.9
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 2.0e-26 122.9 155 52.3
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 2.0e-26 122.9 165 48.5
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 2.6e-26 122.5 121 56.2
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 3.2e-24 115.5 118 53.4
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 3.2e-24 115.5 159 48.4
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 3.2e-24 115.5 124 58.1
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 2.7e-23 112.5 145 49.7
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 6.6e-22 107.8 134 50.7
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 6.6e-22 107.8 143 46.9
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 8.6e-22 107.5 145 47.6
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 1.5e-21 106.7 91 64.8
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 1.4e-19 100.1 85 62.4
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 1.4e-19 100.1 119 48.7
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 8.9e-19 97.4 122 49.2
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 9.8e-18 94.0 117 49.6
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 1.7e-17 93.2 93 57.0
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 8.3e-17 90.9 92 56.5
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 1.9e-16 89.7 170 41.8
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 2.7e-15 85.9 92 52.2
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 2.3e-14 82.8 121 42.1
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 3.0e-14 82.4 137 48.2
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 3.3e-13 79.0 89 49.4
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 1.6e-12 76.6 126 40.5
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 8.9e-11 70.9 53 66.0
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 2.6e-10 69.3 116 38.8
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 5.8e-10 68.2 56 62.5
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 2.9e-09 65.9 98 48.0
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 4.9e-09 65.1 50 70.0
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 1.4e-08 63.5 50 64.0
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 3.5e-07 58.9 33 84.8
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 3.5e-07 58.9 57 52.6
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 7.8e-07 57.8 42 66.7
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 6.6e-06 54.7 99 44.4


User provided reference genes

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