Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37884 Davidia involucrata HOM05D002270 ORTHO05D002866 5.0e-75 284.3 134 100.0
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 2.0e-44 182.6 99 85.9
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.0e-19 99.0 99 48.5
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.9e-18 96.3 99 51.5
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 4.7e-17 91.7 99 46.5
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.4e-16 90.1 99 40.4
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.4e-16 90.1 99 45.5
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 4.0e-16 88.6 99 45.5
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 5.2e-16 88.2 74 52.7
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 1.3e-14 83.6 94 48.9
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 2.2e-14 82.8 99 38.4
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 1.4e-13 80.1 99 41.4
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 3.5e-12 75.5 99 38.4
Cpa.g.sc1872.2 Carica papaya HOM05D002270 ORTHO05D002866 4.6e-12 75.1 99 39.4
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.0e-11 73.9 98 36.7
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.3e-11 73.6 99 39.4
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.7e-11 73.2 104 38.5
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 3.9e-11 72.0 96 36.5
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 8.6e-11 70.9 99 39.4
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 1.5e-10 70.1 96 34.4
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 2.1e-09 66.2 99 34.3
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 2.1e-09 66.2 99 34.3
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 2.1e-09 66.2 70 45.7
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 2.8e-09 65.9 97 39.2
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 3.6e-09 65.5 95 33.7
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 4.7e-09 65.1 96 37.5
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 2.4e-08 62.8 99 35.4
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.2e-07 60.5 124 26.6
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 2.0e-07 59.7 66 37.9
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 7.6e-07 57.8 75 40.0
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.7e-06 56.6 97 35.1
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 2.2e-06 56.2 97 34.0
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.9e-06 55.8 99 34.3
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.9e-06 55.8 96 30.2
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 4.9e-06 55.1 115 31.3


User provided reference genes

Program Settings