Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37798 Davidia involucrata HOM05D003943 ORTHO05D004753 2.0e-118 429.1 213 100.0
TAR633G0404 Trochodendron aralioides HOM05D003943 ORTHO05D004753 2.4e-116 422.2 213 97.7
Dinv20358 Davidia involucrata HOM05D003943 ORTHO05D004753 4.1e-116 421.4 213 98.1
Rhsim08G0248000 Rhododendron simsii HOM05D003943 ORTHO05D004753 9.2e-116 420.2 213 96.7
Actinidia21868 Actinidia chinensis HOM05D003943 ORTHO05D004753 6.0e-115 417.5 213 96.2
Actinidia38793 Actinidia chinensis HOM05D003943 ORTHO05D004753 1.3e-114 416.4 213 96.2
vmacro18760 Vaccinium macrocarpon HOM05D003943 ORTHO05D004753 1.7e-114 416.0 217 95.4
TAR623G0676 Trochodendron aralioides HOM05D003943 ORTHO05D004753 2.3e-114 415.6 213 95.8
Sopen09g036280 Solanum pennellii HOM05D003943 ORTHO05D004753 3.9e-114 414.8 213 95.3
Lj6A21G25 Lonicera japonica HOM05D003943 ORTHO05D004753 5.1e-114 414.5 213 95.3
Lj6A3G40 Lonicera japonica HOM05D003943 ORTHO05D004753 5.1e-114 414.5 213 95.3
CSS0000599 Camellia sinensis var. sinensis HOM05D003943 ORTHO05D004753 6.6e-114 414.1 213 94.8
Nn2g14305 Nelumbo nucifera HOM05D003943 ORTHO05D004753 6.6e-114 414.1 213 96.2
Lsat_1_v5_gn_4_88760 Lactuca sativa HOM05D003943 ORTHO05D004753 1.1e-113 413.3 213 94.8
Lsat_1_v5_gn_6_32361 Lactuca sativa HOM05D003943 ORTHO05D004753 1.1e-113 413.3 213 94.8
PGSC0003DMG400021625 Solanum tuberosum HOM05D003943 ORTHO05D004753 1.1e-113 413.3 213 94.8
MSTRG.10894 Avicennia marina HOM05D003943 ORTHO05D004753 3.3e-113 411.8 213 94.8
CiPaw.10G017400 Carya illinoinensis HOM05D003943 ORTHO05D004753 3.3e-113 411.8 213 94.4
Nitab4.5_0008073g0030 Nicotiana tabacum HOM05D003943 ORTHO05D004753 4.3e-113 411.4 213 94.4
ATR0772G207 Amborella trichopoda HOM05D003943 ORTHO05D004753 7.3e-113 410.6 213 94.4
Oeu039454.1 Olea europaea HOM05D003943 ORTHO05D004753 7.3e-113 410.6 213 93.9
GSVIVG01011153001 Vitis vinifera HOM05D003943 ORTHO05D004753 1.2e-112 409.8 213 94.4
Hma1.2p1_1104F.1_g257380 Hydrangea macrophylla HOM05D003943 ORTHO05D004753 1.6e-112 409.5 212 96.2
unitig_32.g11085 Utricularia gibba HOM05D003943 ORTHO05D004753 1.6e-112 409.5 213 93.9
Oeu049654.1 Olea europaea HOM05D003943 ORTHO05D004753 2.8e-112 408.7 213 93.9
Prupe.4G241300 Prunus persica HOM05D003943 ORTHO05D004753 1.1e-111 406.8 213 92.5
Ciclev10012509m.g Citrus clementina HOM05D003943 ORTHO05D004753 1.4e-111 406.4 213 93.4
Haze_03432 Corylus avellana HOM05D003943 ORTHO05D004753 1.4e-111 406.4 213 93.4
Haze_20185 Corylus avellana HOM05D003943 ORTHO05D004753 1.4e-111 406.4 213 93.4
Manes.01G025400 Manihot esculenta HOM05D003943 ORTHO05D004753 1.4e-111 406.4 213 92.5
Peaxi162Scf00286g00330 Petunia axillaris HOM05D003943 ORTHO05D004753 1.4e-111 406.4 214 94.4
SGA_v2.0_scaffold71G24009 Striga asiatica HOM05D003943 ORTHO05D004753 1.4e-111 406.4 213 93.4
Atru.chr12.911 Acer truncatum HOM05D003943 ORTHO05D004753 1.8e-111 406.0 213 93.9
Eucgr.K02620 Eucalyptus grandis HOM05D003943 ORTHO05D004753 1.8e-111 406.0 213 93.0
Migut.I01176 Erythranthe guttata HOM05D003943 ORTHO05D004753 2.4e-111 405.6 213 93.0
Atru.chr8.1362 Acer truncatum HOM05D003943 ORTHO05D004753 3.1e-111 405.2 213 93.0
Manes.08G033500 Manihot esculenta HOM05D003943 ORTHO05D004753 3.1e-111 405.2 213 92.0
ClCG01G015010 Citrullus lanatus HOM05D003943 ORTHO05D004753 4.0e-111 404.8 213 93.0
MELO3C024586.2 Cucumis melo HOM05D003943 ORTHO05D004753 4.0e-111 404.8 213 92.5
Potri.016G070400 Populus trichocarpa HOM05D003943 ORTHO05D004753 8.9e-111 403.7 213 92.0
HanXRQChr09g0277391 Helianthus annuus HOM05D003943 ORTHO05D004753 1.2e-110 403.3 213 92.0
HanXRQChr17g0533251 Helianthus annuus HOM05D003943 ORTHO05D004753 1.2e-110 403.3 213 92.0
Hund10875 Selenicereus undatus HOM05D003943 ORTHO05D004753 1.5e-110 402.9 213 91.5
TWI77G0554 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 1.5e-110 402.9 213 92.0
Sabra16G0070600 Salix brachista HOM05D003943 ORTHO05D004753 2.0e-110 402.5 213 92.0
Sabra16G0072800 Salix brachista HOM05D003943 ORTHO05D004753 2.0e-110 402.5 213 92.0
CANSAT64G2459 Cannabis sativa HOM05D003943 ORTHO05D004753 2.6e-110 402.1 213 91.1
Glyma.02G196900 Glycine max HOM05D003943 ORTHO05D004753 2.6e-110 402.1 213 91.5
Psat6g114680 Pisum sativum HOM05D003943 ORTHO05D004753 2.6e-110 402.1 213 91.5
Cc04_g00390 Coffea canephora HOM05D003943 ORTHO05D004753 3.4e-110 401.7 222 90.5
Sed0023950 Sechium edule HOM05D003943 ORTHO05D004753 3.4e-110 401.7 213 92.5
QL07p036748 Quercus lobata HOM05D003943 ORTHO05D004753 4.4e-110 401.4 212 92.0
TWI74G1172 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 4.4e-110 401.4 213 91.5
Aqoxy1G00659 Aquilegia oxysepala HOM05D003943 ORTHO05D004753 5.8e-110 401.0 213 91.1
Potri.006G203400 Populus trichocarpa HOM05D003943 ORTHO05D004753 5.8e-110 401.0 213 92.0
Cfa010504 Carpinus fangiana HOM05D003943 ORTHO05D004753 7.6e-110 400.6 213 91.5
Duzib093G1950 Durio zibethinus HOM05D003943 ORTHO05D004753 7.6e-110 400.6 213 91.5
Gohir.A09G134200 Gossypium hirsutum HOM05D003943 ORTHO05D004753 7.6e-110 400.6 213 91.5
Gorai.006G149400 Gossypium raimondii HOM05D003943 ORTHO05D004753 7.6e-110 400.6 213 91.5
MD05G1235300 Malus domestica HOM05D003943 ORTHO05D004753 7.6e-110 400.6 213 90.6
Sed0024685 Sechium edule HOM05D003943 ORTHO05D004753 7.6e-110 400.6 213 92.0
arahy.Tifrunner.gnm1.ann1.07MWYB Arachis hypogaea HOM05D003943 ORTHO05D004753 9.9e-110 400.2 213 91.5
arahy.Tifrunner.gnm1.ann1.T05T6P Arachis hypogaea HOM05D003943 ORTHO05D004753 9.9e-110 400.2 213 91.5
CsaV3_6G041100 Cucumis sativus L. HOM05D003943 ORTHO05D004753 9.9e-110 400.2 213 91.5
THA.LOC104809953 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 9.9e-110 400.2 213 92.5
THA.LOC104826802 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 9.9e-110 400.2 213 92.5
TPR.G5876 Trifolium pratense HOM05D003943 ORTHO05D004753 9.9e-110 400.2 213 91.1
Glyma.10G002300 Glycine max HOM05D003943 ORTHO05D004753 1.3e-109 399.8 213 90.6
Glyma.10G081400 Glycine max HOM05D003943 ORTHO05D004753 1.3e-109 399.8 213 90.6
Lalb_Chr11g0067891 Lupinus albus HOM05D003943 ORTHO05D004753 1.3e-109 399.8 213 91.5
Phvul.007G268100 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 1.3e-109 399.8 213 91.1
PGR004G2105 Punica granatum HOM05D003943 ORTHO05D004753 1.3e-109 399.8 213 91.5
PGR142G4032 Punica granatum HOM05D003943 ORTHO05D004753 1.3e-109 399.8 213 91.5
Lalb_Chr02g0144091 Lupinus albus HOM05D003943 ORTHO05D004753 1.7e-109 399.4 213 91.1
Medtr0508s0010 Medicago truncatula HOM05D003943 ORTHO05D004753 2.2e-109 399.1 211 91.5
CDE10G1025 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 2.9e-109 398.7 213 91.5
Gohir.D01G191300 Gossypium hirsutum HOM05D003943 ORTHO05D004753 2.9e-109 398.7 213 90.6
Gorai.002G235200 Gossypium raimondii HOM05D003943 ORTHO05D004753 2.9e-109 398.7 213 90.6
TPR.G2813 Trifolium pratense HOM05D003943 ORTHO05D004753 2.9e-109 398.7 213 90.6
RcHm_v2.0_Chr2g0122251 Rosa chinensis HOM05D003943 ORTHO05D004753 3.8e-109 398.3 213 90.6
RcHm_v2.0_Chr4g0409741 Rosa chinensis HOM05D003943 ORTHO05D004753 3.8e-109 398.3 213 90.6
VMungo0331G0074 Vigna mungo HOM05D003943 ORTHO05D004753 3.8e-109 398.3 213 90.6
VMungo0720G1310 Vigna mungo HOM05D003943 ORTHO05D004753 3.8e-109 398.3 213 90.6
A10p30010 Brassica napus HOM05D003943 ORTHO05D004753 4.9e-109 397.9 213 91.5
C09p70420 Brassica napus HOM05D003943 ORTHO05D004753 4.9e-109 397.9 213 91.5
BolC9t59788H Brassica oleracea HOM05D003943 ORTHO05D004753 4.9e-109 397.9 213 91.5
BraA10t45041Z Brassica rapa HOM05D003943 ORTHO05D004753 4.9e-109 397.9 213 91.5
Medtr3g088865 Medicago truncatula HOM05D003943 ORTHO05D004753 4.9e-109 397.9 211 91.0
Phvul.010G103000 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 4.9e-109 397.9 213 90.6
SalBow6G5742 Salvia bowleyana HOM05D003943 ORTHO05D004753 6.4e-109 397.5 213 90.6
Ca_16636_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 8.4e-109 397.1 213 89.7
Thecc.05G104300 Theobroma cacao HOM05D003943 ORTHO05D004753 8.4e-109 397.1 213 90.6
ECA233G4676 Erigeron canadensis HOM05D003943 ORTHO05D004753 1.1e-108 396.7 212 91.0
FvH4_1g24730 Fragaria vesca HOM05D003943 ORTHO05D004753 1.1e-108 396.7 213 90.1
FvH4_1g24810 Fragaria vesca HOM05D003943 ORTHO05D004753 1.1e-108 396.7 213 90.1
FAN19G3070 Fragaria x ananassa HOM05D003943 ORTHO05D004753 1.1e-108 396.7 213 90.1
BcaB05g21673 Brassica carinata HOM05D003943 ORTHO05D004753 1.4e-108 396.4 213 91.1
C02p02670 Brassica napus HOM05D003943 ORTHO05D004753 1.4e-108 396.4 213 91.1
BolC2t06233H Brassica oleracea HOM05D003943 ORTHO05D004753 1.4e-108 396.4 213 91.1
Ca_11700_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 1.4e-108 396.4 213 89.7
BcaC03g13169 Brassica carinata HOM05D003943 ORTHO05D004753 2.4e-108 395.6 213 90.6
Cpa.g.sc104.32 Carica papaya HOM05D003943 ORTHO05D004753 2.4e-108 395.6 213 90.6
BraA02t04878Z Brassica rapa HOM05D003943 ORTHO05D004753 3.2e-108 395.2 213 90.6
Gohir.A01G201400 Gossypium hirsutum HOM05D003943 ORTHO05D004753 3.2e-108 395.2 213 90.1
Lj1g0010263 Lotus japonicus HOM05D003943 ORTHO05D004753 3.2e-108 395.2 213 88.7
MD10G1211300 Malus domestica HOM05D003943 ORTHO05D004753 3.2e-108 395.2 213 89.7
HPP92_002146 Vanilla planifolia HOM05D003943 ORTHO05D004753 4.2e-108 394.8 208 91.3
PSO339G3654 Papaver somniferum HOM05D003943 ORTHO05D004753 5.4e-108 394.4 212 89.2
PSO384G4082 Papaver somniferum HOM05D003943 ORTHO05D004753 5.4e-108 394.4 212 89.2
Aa31sc52G210 Aethionema arabicum HOM05D003943 ORTHO05D004753 9.3e-108 393.7 213 91.1
COL.COLO4_29575 Corchorus olitorius HOM05D003943 ORTHO05D004753 1.6e-107 392.9 213 91.1
Sp6g36490 Schrenkiella parvula HOM05D003943 ORTHO05D004753 1.6e-107 392.9 213 90.6
Carub.0006s0525 Capsella rubella HOM05D003943 ORTHO05D004753 2.7e-107 392.1 213 91.1
AL6G16440 Arabidopsis lyrata HOM05D003943 ORTHO05D004753 3.5e-107 391.7 213 90.6
AT5G06360 Arabidopsis thaliana HOM05D003943 ORTHO05D004753 3.5e-107 391.7 213 90.6
unitig_748.g7832 Utricularia gibba HOM05D003943 ORTHO05D004753 3.5e-107 391.7 201 94.0
Thhalv10014439m.g Eutrema salsugineum HOM05D003943 ORTHO05D004753 1.3e-106 389.8 213 90.1
Mapoly0020s0123 Marchantia polymorpha HOM05D003943 ORTHO05D004753 1.7e-106 389.4 213 88.7
Pp3c7_2280 Physcomitrium patens HOM05D003943 ORTHO05D004753 3.9e-106 388.3 213 87.8
Ah.12g059190 Amaranthus hybridus HOM05D003943 ORTHO05D004753 5.1e-106 387.9 213 87.8
Sabra06G0156600 Salix brachista HOM05D003943 ORTHO05D004753 1.1e-105 386.7 237 82.3
Zm00001eb111290 Zea mays HOM05D003943 ORTHO05D004753 1.9e-105 386.0 212 88.2
Zm00001eb330440 Zea mays HOM05D003943 ORTHO05D004753 1.9e-105 386.0 212 88.2
AagrBONN_evm.TU.Sc2ySwM_369.90 Anthoceros agrestis HOM05D003943 ORTHO05D004753 3.3e-105 385.2 213 86.9
CARHR207110 Cardamine hirsuta HOM05D003943 ORTHO05D004753 3.3e-105 385.2 213 87.3
EL10Ac5g12966 Beta vulgaris HOM05D003943 ORTHO05D004753 9.6e-105 383.6 213 88.3
SMO367G0573 Selaginella moellendorffii HOM05D003943 ORTHO05D004753 2.8e-104 382.1 213 86.4
AUR62036383 Chenopodium quinoa HOM05D003943 ORTHO05D004753 8.1e-104 380.6 213 86.4
CBR_g12036 Chara braunii HOM05D003943 ORTHO05D004753 1.1e-103 380.2 213 85.0
FAN23G0735 Fragaria x ananassa HOM05D003943 ORTHO05D004753 9.0e-103 377.1 229 82.5
Os07g0673100 Oryza sativa ssp. japonica HOM05D003943 ORTHO05D004753 2.0e-102 375.9 212 86.8
SEGI_04875 Sequoiadendron giganteum HOM05D003943 ORTHO05D004753 5.8e-102 374.4 195 91.8
AUR62030745 Chenopodium quinoa HOM05D003943 ORTHO05D004753 9.9e-102 373.6 208 86.1
CiPaw.09G020900 Carya illinoinensis HOM05D003943 ORTHO05D004753 3.8e-101 371.7 192 95.3
Lj2g0010046 Lotus japonicus HOM05D003943 ORTHO05D004753 9.3e-100 367.1 213 85.0
PRCOL_00000915 Prasinoderma coloniale HOM05D003943 ORTHO05D004753 1.2e-99 366.7 213 83.1
MCO03G138 Micromonas commoda HOM05D003943 ORTHO05D004753 6.6e-98 360.9 213 78.4
FAN19G1372 Fragaria x ananassa HOM05D003943 ORTHO05D004753 3.6e-96 355.1 193 89.1
FAN28G2380 Fragaria x ananassa HOM05D003943 ORTHO05D004753 1.1e-95 353.6 193 88.6
Aa31LG3G5080 Aethionema arabicum HOM05D003943 ORTHO05D004753 4.0e-95 351.7 192 90.6
Cre12.g507300 Chlamydomonas reinhardtii HOM05D003943 ORTHO05D004753 6.9e-95 350.9 213 80.3
AagrBONN_evm.TU.Sc2ySwM_340.394 Anthoceros agrestis HOM05D003943 ORTHO05D004753 9.3e-92 340.5 186 87.6
DCAR_016668 Daucus carota HOM05D003943 ORTHO05D004753 1.2e-91 340.1 182 89.0
PGSC0003DMG400029099 Solanum tuberosum HOM05D003943 ORTHO05D004753 1.2e-91 340.1 213 81.7
Gohir.D09G130700 Gossypium hirsutum HOM05D003943 ORTHO05D004753 1.3e-90 336.7 213 81.2
DCAR_017903 Daucus carota HOM05D003943 ORTHO05D004753 2.3e-90 335.9 176 90.9
Rhsim05G0206200 Rhododendron simsii HOM05D003943 ORTHO05D004753 1.3e-88 330.1 213 80.8
FAN23G1436 Fragaria x ananassa HOM05D003943 ORTHO05D004753 2.1e-88 329.3 177 88.7
FAN26G0481 Fragaria x ananassa HOM05D003943 ORTHO05D004753 2.1e-88 329.3 177 88.7
Sc14g0006610 Simmondsia chinensis HOM05D003943 ORTHO05D004753 1.0e-85 320.5 174 90.2
Nitab4.5_0003291g0080 Nicotiana tabacum HOM05D003943 ORTHO05D004753 1.7e-85 319.7 209 79.9
CAN.G710.48 Capsicum annuum HOM05D003943 ORTHO05D004753 2.2e-85 319.3 160 95.6
Peaxi162Scf01149g00220 Petunia axillaris HOM05D003943 ORTHO05D004753 1.0e-82 310.5 161 92.5
Haze_27191 Corylus avellana HOM05D003943 ORTHO05D004753 2.1e-80 302.8 212 68.4
Cfa024104 Carpinus fangiana HOM05D003943 ORTHO05D123184 1.8e-66 256.5 209 59.8
TPR.G6300 Trifolium pratense HOM05D003943 ORTHO05D004753 3.3e-65 252.3 234 59.8
CDE10G0220 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 1.7e-56 223.4 113 92.9
SHI12410 Sapria himalayana HOM05D003943 ORTHO05D004753 7.5e-49 198.0 98 92.9
Lsat_1_v5_gn_8_162181 Lactuca sativa HOM05D003943 ORTHO05D004753 3.8e-45 185.7 144 68.1
Duzib106G1686 Durio zibethinus HOM05D003943 ORTHO05D004753 1.8e-42 176.8 196 53.6
BcaC06g32370 Brassica carinata HOM05D003943 ORTHO05D004753 3.1e-39 166.0 95 89.5
BcaNung06320 Brassica carinata HOM05D003943 ORTHO05D004753 3.1e-39 166.0 95 89.5
RcHm_v2.0_Chr7g0216591 Rosa chinensis HOM05D003943 ORTHO05D004753 7.0e-39 164.9 108 75.9
EL10Ac3g06422 Beta vulgaris HOM05D003943 ORTHO05D004753 2.0e-38 163.3 135 63.7
Lj9C540G13 Lonicera japonica HOM05D003943 ORTHO05D004753 5.9e-38 161.8 195 50.3
HanXRQChr03g0072971 Helianthus annuus HOM05D003943 ORTHO05D004753 2.2e-37 159.8 92 83.7
RcHm_v2.0_Chr7g0216551 Rosa chinensis HOM05D003943 ORTHO05D004753 7.2e-36 154.8 235 44.7
CDE10G0110 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 1.4e-34 150.6 87 87.4
SHI12413 Sapria himalayana HOM05D003943 ORTHO05D004753 2.4e-31 139.8 81 86.4
Lsat_1_v5_gn_6_65181 Lactuca sativa HOM05D003943 ORTHO05D000236 1.3e-29 134.0 92 72.8
Actinidia21636 Actinidia chinensis HOM05D003943 ORTHO05D004753 1.2e-27 127.5 111 66.7
BcaC01g01015 Brassica carinata HOM05D003943 ORTHO05D004753 2.9e-24 116.3 73 82.2
RcHm_v2.0_Chr7g0216581 Rosa chinensis HOM05D003943 ORTHO05D004753 2.4e-15 86.7 81 60.5
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 6.2e-11 72.0 59 64.4
Nitab4.5_0006519g0020 Nicotiana tabacum HOM05D000032 ORTHO05D005217 2.2e-08 63.5 52 67.3
C04p30500 Brassica napus HOM05D002284 ORTHO05D033292 1.2e-06 57.8 34 79.4
BcaC05g26689 Brassica carinata HOM05D003943 ORTHO05D004753 1.6e-06 57.4 38 68.4


User provided reference genes

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