Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 2.4e-96 355.5 180 100.0
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 5.2e-35 151.8 191 47.6
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 7.5e-34 147.9 197 47.7
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 9.8e-34 147.5 210 48.6
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 1.3e-33 147.1 226 42.0
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 4.5e-31 138.7 207 47.3
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 3.8e-30 135.6 227 42.3
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 3.0e-27 125.9 227 41.0
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 3.4e-26 122.5 197 45.7
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 4.4e-26 122.1 226 39.8
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 1.1e-24 117.5 208 41.8
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 7.0e-24 114.8 196 43.4
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 1.3e-22 110.5 229 38.0
CiPaw.16G021200 Carya illinoinensis HOM05D007988 ORTHO05D009824 1.7e-22 110.2 207 41.5
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 1.7e-22 110.2 225 38.2
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 1.1e-21 107.5 209 39.7
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 1.6e-20 103.6 212 39.2
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 2.1e-20 103.2 220 37.7
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 2.1e-20 103.2 220 37.7
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 4.7e-20 102.1 185 43.8
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 4.7e-20 102.1 227 36.1
CSS0018515 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 8.0e-20 101.3 127 53.5
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 1.0e-19 100.9 214 36.4
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 6.8e-19 98.2 176 42.6
Nn5g28477 Nelumbo nucifera HOM05D007988 ORTHO05D009824 4.4e-18 95.5 202 39.6
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 4.9e-17 92.0 215 39.5
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 1.1e-16 90.9 218 36.7
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 4.1e-16 89.0 230 35.7
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 7.0e-16 88.2 186 41.9
FAN27G1764 Fragaria x ananassa HOM05D007988 ORTHO05D009824 9.2e-16 87.8 186 41.4
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 9.2e-16 87.8 186 41.4
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 2.0e-15 86.7 229 35.8
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 2.0e-15 86.7 186 43.5
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 2.7e-15 86.3 220 35.9
FAN20G0590 Fragaria x ananassa HOM05D007988 ORTHO05D009824 4.6e-15 85.5 133 50.4
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 1.3e-14 84.0 221 36.2
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 1.3e-14 84.0 221 36.2
Nn1g08990 Nelumbo nucifera HOM05D007988 ORTHO05D009824 3.3e-13 79.3 206 35.4
ECA232G2067 Erigeron canadensis HOM05D007988 ORTHO05D009824 7.3e-13 78.2 183 38.3
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 1.2e-12 77.4 163 41.7
Eucgr.F02525 Eucalyptus grandis HOM05D007988 ORTHO05D009824 3.6e-12 75.9 233 34.8
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 6.2e-12 75.1 157 43.9
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 1.1e-11 74.3 181 40.3
AUR62007686 Chenopodium quinoa HOM05D007988 ORTHO05D009824 3.1e-11 72.8 234 34.6
EL10Ac1g01385 Beta vulgaris HOM05D007988 ORTHO05D009824 5.2e-11 72.0 147 41.5
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 8.9e-11 71.2 196 39.3
Sed0016946 Sechium edule HOM05D007988 ORTHO05D009824 8.9e-11 71.2 166 36.7
CsaV3_6G031310 Cucumis sativus L. HOM05D007988 ORTHO05D009824 1.5e-10 70.5 163 35.0
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 2.0e-10 70.1 154 40.9
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 2.6e-10 69.7 180 37.2
MELO3C008455.2 Cucumis melo HOM05D007988 ORTHO05D009824 3.4e-10 69.3 163 34.4
Lalb_Chr04g0253601 Lupinus albus HOM05D007988 ORTHO05D009824 4.4e-10 68.9 145 42.1
ClCG08G006150 Citrullus lanatus HOM05D007988 ORTHO05D009824 1.7e-09 67.0 148 34.5
Cpa.g.sc64.159 Carica papaya HOM05D007988 ORTHO05D009824 2.9e-09 66.2 155 38.7
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 3.7e-09 65.9 156 37.8
HanXRQChr09g0256671 Helianthus annuus HOM05D007988 ORTHO05D009824 6.4e-09 65.1 171 37.4
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 2.4e-08 63.2 183 39.3
MBI06_g32176_MAGBIO Magnolia biondii HOM05D007988 ORTHO05D009824 5.4e-08 62.0 46 63.0
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 1.2e-07 60.8 198 37.4
THA.LOC104813286 Tarenaya hassleriana HOM05D012069 ORTHO05D009824 1.2e-07 60.8 131 43.5
PGSC0003DMG400002385 Solanum tuberosum HOM05D007988 ORTHO05D009824 2.0e-07 60.1 154 38.3
arahy.Tifrunner.gnm1.ann1.1JY9DA Arachis hypogaea HOM05D007988 ORTHO05D009824 7.8e-07 58.2 195 35.4
AUR62013453 Chenopodium quinoa HOM05D007988 ORTHO05D009824 7.8e-07 58.2 162 35.8
Lalb_Chr08g0240981 Lupinus albus HOM05D007988 ORTHO05D009824 1.0e-06 57.8 154 39.6
arahy.Tifrunner.gnm1.ann1.GX31L7 Arachis hypogaea HOM05D007988 ORTHO05D009824 2.3e-06 56.6 196 35.2
Sopen04g026140 Solanum pennellii HOM05D007988 ORTHO05D009824 2.3e-06 56.6 156 37.8
Aqoxy5G02290 Aquilegia oxysepala HOM05D007988 ORTHO05D009824 3.0e-06 56.2 80 48.8
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 3.0e-06 56.2 201 34.3
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 3.0e-06 56.2 147 38.8
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 8.6e-06 54.7 213 34.3


User provided reference genes

Program Settings