Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37731 Davidia involucrata HOM05D001390 ORTHO05D045155 9.8e-78 293.5 160 100.0
Dinv30627 Davidia involucrata HOM05D001390 ORTHO05D001522 2.0e-62 242.7 154 85.7
Dinv38136 Davidia involucrata HOM05D001390 ORTHO05D001522 6.8e-47 191.0 155 74.2
Actinidia18216 Actinidia chinensis HOM05D001390 ORTHO05D001522 1.2e-46 190.3 155 70.3
Actinidia01731 Actinidia chinensis HOM05D001390 ORTHO05D001522 2.5e-41 172.6 155 65.8
CSS0018555 Camellia sinensis var. sinensis HOM05D001390 ORTHO05D001522 2.8e-40 169.1 156 64.1
Rhsim08G0211300 Rhododendron simsii HOM05D001390 ORTHO05D001522 2.0e-38 162.9 154 61.0
Hma1.2p1_0017F.1_g011330 Hydrangea macrophylla HOM05D001390 ORTHO05D001522 5.4e-36 154.8 155 62.6
vmacro19014 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 2.1e-35 152.9 155 58.1
DCAR_016272 Daucus carota HOM05D001390 ORTHO05D001522 3.5e-35 152.1 155 59.4
Potri.003G031000 Populus trichocarpa HOM05D001390 ORTHO05D001522 8.7e-34 147.5 155 56.8
Hma1.2p1_0017F.1_g011380 Hydrangea macrophylla HOM05D001390 ORTHO05D001522 1.5e-33 146.7 155 61.3
Duzib160G0155 Durio zibethinus HOM05D001390 ORTHO05D001522 2.8e-32 142.5 150 58.7
Cfa001943 Carpinus fangiana HOM05D001390 ORTHO05D001522 1.4e-31 140.2 154 54.5
TWI12G0105 Tripterygium wilfordii HOM05D001390 ORTHO05D001522 3.1e-31 139.0 150 60.0
TAR636G1701 Trochodendron aralioides HOM05D001390 ORTHO05D001522 3.1e-31 139.0 155 56.8
Haze_16583 Corylus avellana HOM05D001390 ORTHO05D001522 6.9e-31 137.9 135 60.0
Thecc.06G031200 Theobroma cacao HOM05D001390 ORTHO05D001522 3.4e-30 135.6 155 54.8
COL.COLO4_11897 Corchorus olitorius HOM05D001390 ORTHO05D001522 1.3e-29 133.7 151 55.6
TAR625G0762 Trochodendron aralioides HOM05D001390 ORTHO05D001522 2.9e-29 132.5 157 55.4
QL05p032089 Quercus lobata HOM05D001390 ORTHO05D001522 3.8e-29 132.1 151 57.6
Manes.04G110600 Manihot esculenta HOM05D001390 ORTHO05D001522 6.4e-29 131.3 155 54.8
Cc04_g04580 Coffea canephora HOM05D001390 ORTHO05D001522 3.2e-28 129.0 158 53.2
DCAR_021354 Daucus carota HOM05D001390 ORTHO05D001522 3.5e-27 125.6 149 50.3
MSTRG.11154 Avicennia marina HOM05D001390 ORTHO05D001522 1.8e-26 123.2 158 47.5
MELO3C023435.2 Cucumis melo HOM05D001390 ORTHO05D001522 1.8e-26 123.2 158 51.3
ClCG09G003050 Citrullus lanatus HOM05D001390 ORTHO05D001522 3.0e-26 122.5 157 52.2
Migut.I00746 Erythranthe guttata HOM05D001390 ORTHO05D001522 3.0e-26 122.5 160 49.4
CiPaw.01G249900 Carya illinoinensis HOM05D001390 ORTHO05D001522 3.9e-26 122.1 148 52.7
Lj5C75G7 Lonicera japonica HOM05D001390 ORTHO05D001522 1.5e-25 120.2 109 61.5
Sed0024441 Sechium edule HOM05D001390 ORTHO05D001522 2.5e-25 119.4 154 49.4
Gohir.A06G115500 Gossypium hirsutum HOM05D001390 ORTHO05D001522 4.3e-25 118.6 128 52.3
Hund06549 Selenicereus undatus HOM05D001390 ORTHO05D001522 2.1e-24 116.3 124 56.5
Nn2g12151 Nelumbo nucifera HOM05D001390 ORTHO05D001522 2.8e-24 115.9 132 53.8
CsaV3_7G032240 Cucumis sativus L. HOM05D001390 ORTHO05D001522 3.7e-24 115.5 160 51.2
MSTRG.22757 Avicennia marina HOM05D001390 ORTHO05D001522 8.1e-24 114.4 158 48.1
Gohir.D06G120100 Gossypium hirsutum HOM05D001390 ORTHO05D001522 1.4e-23 113.6 136 49.3
Gorai.010G138100 Gossypium raimondii HOM05D001390 ORTHO05D001522 3.1e-23 112.5 127 48.8
Manes.11G058800 Manihot esculenta HOM05D001390 ORTHO05D001522 3.1e-23 112.5 144 52.8
FAN05G2344 Fragaria x ananassa HOM05D001390 ORTHO05D001522 1.2e-22 110.5 147 51.0
FAN02G0271 Fragaria x ananassa HOM05D001390 ORTHO05D001522 1.5e-22 110.2 147 51.0
Ciclev10024693m.g Citrus clementina HOM05D001390 ORTHO05D001522 3.4e-22 109.0 143 51.0
Lalb_Chr04g0262321 Lupinus albus HOM05D001390 ORTHO05D001522 3.4e-22 109.0 157 45.9
MD17G1215200 Malus domestica HOM05D001390 ORTHO05D001522 3.4e-22 109.0 151 47.7
Prupe.3G090800 Prunus persica HOM05D001390 ORTHO05D001522 4.5e-22 108.6 142 50.0
Sed0026790 Sechium edule HOM05D001390 ORTHO05D001522 4.5e-22 108.6 128 53.9
FAN14G5647 Fragaria x ananassa HOM05D001390 ORTHO05D001522 5.8e-22 108.2 147 50.3
RcHm_v2.0_Chr2g0134791 Rosa chinensis HOM05D001390 ORTHO05D001522 5.8e-22 108.2 148 48.6
Glyma.07G028800 Glycine max HOM05D001390 ORTHO05D001522 9.9e-22 107.5 149 44.3
Ciclev10024692m.g Citrus clementina HOM05D001390 ORTHO05D001522 1.7e-21 106.7 157 47.8
Aqoxy7G03611 Aquilegia oxysepala HOM05D001390 ORTHO05D001522 2.2e-21 106.3 157 46.5
Nn8g39585 Nelumbo nucifera HOM05D001390 ORTHO05D001522 3.8e-21 105.5 142 49.3
Solyc06g068230.4 Solanum lycopersicum HOM05D001390 ORTHO05D001522 4.9e-21 105.1 156 46.8
Atru.chr1.2876 Acer truncatum HOM05D001390 ORTHO05D001522 6.4e-21 104.8 120 60.0
CANSAT56G1961 Cannabis sativa HOM05D001390 ORTHO05D001522 6.4e-21 104.8 149 51.0
Sopen06g025510 Solanum pennellii HOM05D001390 ORTHO05D001522 1.4e-20 103.6 156 46.2
Lj3g0008042 Lotus japonicus HOM05D001390 ORTHO05D001522 1.9e-20 103.2 131 46.6
PGR102G0603 Punica granatum HOM05D001390 ORTHO05D001522 2.5e-20 102.8 138 52.2
Nitab4.5_0000373g0150 Nicotiana tabacum HOM05D001390 ORTHO05D001522 5.5e-20 101.7 158 44.3
Ah.01g020470 Amaranthus hybridus HOM05D001390 ORTHO05D001522 7.1e-20 101.3 121 56.2
Nitab4.5_0007970g0020 Nicotiana tabacum HOM05D001390 ORTHO05D001522 7.1e-20 101.3 156 44.9
HanXRQChr09g0274771 Helianthus annuus HOM05D001390 ORTHO05D001522 9.3e-20 100.9 125 49.6
ECA232G4532 Erigeron canadensis HOM05D001390 ORTHO05D001522 1.2e-19 100.5 123 50.4
EL10Ac9g21887 Beta vulgaris HOM05D001390 ORTHO05D001522 1.6e-19 100.1 121 53.7
Ciclev10024894m.g Citrus clementina HOM05D001390 ORTHO05D001522 1.6e-19 100.1 131 52.7
arahy.Tifrunner.gnm1.ann1.JY1AQN Arachis hypogaea HOM05D001390 ORTHO05D001522 2.1e-19 99.8 132 48.5
arahy.Tifrunner.gnm1.ann1.MI82BM Arachis hypogaea HOM05D001390 ORTHO05D001522 2.1e-19 99.8 132 48.5
Ciclev10024689m.g Citrus clementina HOM05D001390 ORTHO05D001522 2.1e-19 99.8 131 52.7
Ciclev10027469m.g Citrus clementina HOM05D001390 ORTHO05D001522 2.1e-19 99.8 131 52.7
Oeu010084.1 Olea europaea HOM05D001390 ORTHO05D001522 3.5e-19 99.0 155 44.5
VMungo0331G0264 Vigna mungo HOM05D001390 ORTHO05D001522 3.5e-19 99.0 152 40.8
PGSC0003DMG400028530 Solanum tuberosum HOM05D001390 ORTHO05D001522 6.0e-19 98.2 156 46.8
Ciclev10024698m.g Citrus clementina HOM05D001390 ORTHO05D001522 7.9e-19 97.8 131 51.9
CAN.G1490.21 Capsicum annuum HOM05D001390 ORTHO05D001522 1.0e-18 97.4 155 43.2
Glyma.08G214000 Glycine max HOM05D001390 ORTHO05D001522 2.3e-18 96.3 149 41.6
AUR62016318 Chenopodium quinoa HOM05D001390 ORTHO05D001522 6.7e-18 94.7 114 57.9
AUR62011502 Chenopodium quinoa HOM05D001390 ORTHO05D001522 8.7e-18 94.4 143 51.0
PSO017G0796 Papaver somniferum HOM05D001390 ORTHO05D001522 1.9e-17 93.2 113 47.8
Phvul.010G157200 Phaseolus vulgaris HOM05D001390 ORTHO05D001522 1.9e-17 93.2 152 40.1
PSO170G6700 Papaver somniferum HOM05D001390 ORTHO05D001522 3.3e-17 92.4 113 47.8
Peaxi162Scf00207g00538 Petunia axillaris HOM05D001390 ORTHO05D001522 7.4e-17 91.3 159 41.5
Psat7g257480 Pisum sativum HOM05D001390 ORTHO05D001522 9.6e-17 90.9 134 44.0
MBI15_g34219_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 1.6e-16 90.1 123 45.5
SGA_v2.0_scaffold5G02720 Striga asiatica HOM05D001390 ORTHO05D001522 8.2e-16 87.8 161 46.0
Nitab4.5_0000142g0490 Nicotiana tabacum HOM05D001390 ORTHO05D045155 6.9e-15 84.7 143 42.0
TPR.G38631 Trifolium pratense HOM05D001390 ORTHO05D001522 3.4e-14 82.4 136 43.4
Medtr4g009960 Medicago truncatula HOM05D001390 ORTHO05D001522 4.5e-14 82.0 107 46.7
Sc10g0006030 Simmondsia chinensis HOM05D001390 ORTHO05D001522 4.6e-11 72.0 160 35.0
Lsat_1_v5_gn_4_87381 Lactuca sativa HOM05D001390 ORTHO05D001522 3.3e-09 65.9 122 41.0


User provided reference genes

Program Settings