Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 2.7e-261 904.8 471 100.0
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 7.1e-209 730.7 484 78.7
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 2.7e-208 728.8 445 82.2
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 4.6e-208 728.0 432 85.0
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 7.8e-208 727.2 448 80.6
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 1.0e-207 726.9 449 82.2
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 6.8e-204 714.1 469 76.5
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 1.5e-203 713.0 449 79.7
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 1.3e-202 709.9 449 79.3
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 1.1e-201 706.8 446 78.5
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 4.6e-200 701.4 468 76.5
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 6.0e-200 701.0 449 78.2
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 1.1e-198 696.8 425 82.8
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 2.5e-198 695.7 449 77.7
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 8.1e-197 690.6 448 77.0
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.4e-196 689.9 449 77.5
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 2.4e-196 689.1 449 78.0
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 4.0e-196 688.3 449 78.0
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 6.9e-196 687.6 449 77.7
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.5e-195 686.4 465 75.7
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.0e-195 686.0 449 77.7
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 7.6e-195 684.1 448 76.8
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 1.3e-194 683.3 450 75.8
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 2.9e-194 682.2 448 76.6
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 3.8e-194 681.8 448 77.7
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 3.8e-194 681.8 447 77.0
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 8.4e-194 680.6 448 75.4
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 1.1e-193 680.2 449 76.4
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 1.4e-193 679.9 488 71.9
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.4e-193 679.1 449 77.1
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 2.3e-191 672.5 445 77.5
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.9e-191 671.8 469 73.1
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 6.6e-191 671.0 446 75.8
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.1e-190 670.2 469 72.9
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 3.3e-190 668.7 448 74.6
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 7.3e-190 667.5 448 74.1
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 7.3e-190 667.5 467 74.5
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 9.6e-190 667.2 448 74.6
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.6e-189 666.4 469 72.7
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 1.6e-189 666.4 467 74.1
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 2.8e-189 665.6 448 75.2
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 2.8e-189 665.6 448 73.4
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 3.6e-189 665.2 437 76.7
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 1.1e-188 663.7 464 73.5
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 1.8e-188 662.9 464 73.3
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 4.2e-185 651.7 467 71.9
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.6e-184 649.8 471 72.2
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 5.1e-183 644.8 448 72.1
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 1.5e-182 643.3 448 71.7
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 1.5e-182 643.3 448 72.3
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 3.3e-182 642.1 452 72.3
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.1e-180 637.1 448 71.9
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 9.0e-180 634.0 471 70.9
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 1.2e-179 633.6 447 71.8
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.7e-178 629.8 444 71.2
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 2.2e-178 629.4 443 71.1
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 4.9e-178 628.2 444 71.4
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 1.1e-177 627.1 448 70.3
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.4e-177 625.9 444 70.5
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 9.3e-177 624.0 444 70.5
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 1.6e-176 623.2 415 75.9
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 2.7e-176 622.5 447 70.5
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 2.7e-176 622.5 446 72.2
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 2.7e-176 622.5 446 72.2
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 6.0e-176 621.3 449 71.0
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 4.8e-173 611.7 473 67.2
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.8e-172 609.8 447 68.5
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 1.2e-171 607.1 448 69.0
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 1.5e-171 606.7 445 70.3
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 4.9e-170 601.7 463 70.0
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 9.3e-169 597.4 449 69.5
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 1.3e-167 593.6 425 72.0
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.3e-167 593.6 548 60.2
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.9e-166 589.7 357 82.4
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 4.3e-166 588.6 453 67.8
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 7.4e-166 587.8 439 67.2
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.3e-165 587.0 445 70.1
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 1.3e-165 587.0 530 61.9
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.4e-164 583.6 446 69.5
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 9.4e-161 570.9 445 64.9
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.0e-159 567.4 340 83.2
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 7.4e-158 561.2 440 66.4
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.3e-154 550.4 380 73.2
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 5.5e-153 545.0 445 63.4
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 8.2e-149 531.2 451 63.9
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 1.1e-148 530.8 448 60.3
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.4e-148 530.4 414 67.9
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 3.1e-148 529.3 472 62.3
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.4e-145 520.4 449 61.9
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 3.6e-144 515.8 467 61.9
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.8e-143 513.5 511 57.5
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 2.0e-139 500.0 485 59.2
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 7.7e-139 498.0 449 61.7
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 1.7e-138 496.9 469 58.8
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 1.2e-136 490.7 358 70.7
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 2.1e-136 490.0 331 75.5
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 5.2e-135 485.3 449 61.0
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 1.5e-126 457.2 326 72.1
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 5.4e-124 448.7 445 57.5
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 5.9e-123 445.3 363 62.5
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 1.6e-120 437.2 331 66.2
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 1.4e-119 434.1 272 80.1
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 8.0e-112 408.3 459 48.4
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 1.6e-107 394.0 427 53.6
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 3.5e-107 392.9 444 49.3
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 1.9e-105 387.1 456 53.5
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 7.3e-105 385.2 271 71.2
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 8.9e-103 378.3 299 64.5
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 1.2e-102 377.9 464 46.8
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 2.8e-96 356.7 300 61.0
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 7.5e-94 348.6 288 66.7
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 7.6e-86 322.0 301 59.5
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 2.4e-84 317.0 419 49.2
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 4.2e-76 289.7 360 45.8
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 5.6e-73 279.3 452 40.5
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 1.3e-64 251.5 756 27.0
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 1.6e-56 224.6 144 77.8
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.3e-50 204.1 139 76.3
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 2.1e-43 181.0 168 61.9
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 1.2e-35 155.2 459 29.4
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 3.3e-33 147.1 168 51.8
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 3.5e-30 137.1 91 71.4
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 3.5e-30 137.1 67 95.5
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 6.1e-27 126.3 521 25.1
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 2.8e-24 117.5 108 58.3
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 3.1e-23 114.0 70 77.1
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 2.9e-21 107.5 80 62.5
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.7e-16 91.7 63 76.2
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 6.5e-13 79.7 168 31.5
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 1.0e-10 72.4 113 39.8
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 2.0e-09 68.2 69 53.6
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 2.7e-06 57.8 308 26.3
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 7.7e-06 56.2 315 27.6


User provided reference genes

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