Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 0.0e+00 2295.0 1155 100.0
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 0.0e+00 1315.1 1264 60.7
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 1.3e-232 810.8 1381 41.1
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.8e-197 694.1 1505 37.1
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 1.5e-183 647.9 1383 37.2
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 2.8e-182 643.7 1378 37.4
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 7.1e-178 629.0 1375 36.2
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.2e-177 628.2 1478 36.2
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 6.0e-161 572.8 1186 38.6
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 3.2e-154 550.4 1430 33.8
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 3.2e-130 470.7 1491 30.8
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 6.5e-123 446.4 1485 30.5
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 5.4e-109 400.2 1541 28.6
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.7e-86 324.3 332 56.3
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 9.9e-79 299.7 1368 28.5
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 7.1e-77 293.5 1296 27.5
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.9e-75 287.7 1344 27.8
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.9e-74 285.4 1359 28.3
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 1.9e-69 268.9 1325 27.2
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.6e-65 255.8 937 29.0
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 7.6e-63 246.9 1346 26.7
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 2.9e-62 245.0 1267 27.8
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 3.2e-61 241.5 1306 27.1
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 1.7e-59 235.7 1390 25.5
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.5e-58 232.6 1403 25.4
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 4.0e-56 224.6 1478 24.6
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 4.0e-56 224.6 1224 25.7
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 7.6e-55 220.3 1394 25.4
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 2.9e-54 218.4 1356 25.7
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 9.6e-50 203.4 1165 26.4
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 7.6e-47 193.7 1284 25.0
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 6.0e-44 184.1 1120 25.7
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 6.7e-43 180.6 1303 22.9
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 1.9e-42 179.1 1185 27.2
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 1.3e-41 176.4 1200 26.4
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.1e-40 173.3 887 27.4
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.1e-40 173.3 887 27.4
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 1.1e-40 173.3 1219 25.2
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 4.1e-40 171.4 1248 26.4
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 3.2e-37 161.8 1131 26.0
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 6.1e-36 157.5 1266 24.2
Atru.chr9.2147 Acer truncatum HOM05D006627 ORTHO05D007753 1.0e-35 156.8 953 26.2
HanXRQChr17g0533291 Helianthus annuus HOM05D006627 ORTHO05D007753 5.7e-34 151.0 1226 24.1
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 7.4e-34 150.6 1083 24.8
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 7.4e-34 150.6 1138 25.4
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 1.6e-33 149.4 1213 25.9
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 2.2e-33 149.1 1196 25.2
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.2e-33 149.1 1191 26.2
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.2e-33 149.1 1201 26.2
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.7e-33 148.3 1137 25.5
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 2.4e-32 145.6 343 34.4
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.1e-32 145.2 1200 25.9
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 9.0e-32 143.7 1123 25.2
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.0e-30 140.2 1191 25.9
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 2.9e-30 138.7 903 25.5
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 3.8e-30 138.3 901 25.7
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 3.8e-30 138.3 901 25.7
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 5.0e-30 137.9 1199 25.2
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 6.5e-30 137.5 1145 24.5
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 8.5e-30 137.1 287 36.6
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 3.2e-29 135.2 879 25.1
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 1.2e-28 133.3 1157 24.7
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 4.6e-28 131.3 186 42.5
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 6.1e-28 131.0 1166 24.1
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 1.0e-27 130.2 1174 24.9
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 4.8e-25 121.3 1208 23.5
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 3.1e-24 118.6 1171 24.9
ECA233G3260 Erigeron canadensis HOM05D001089 ORTHO05D000920 6.9e-24 117.5 613 26.3
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 3.4e-23 115.2 1254 23.3
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 3.4e-23 115.2 1164 23.8
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 5.0e-22 111.3 1080 24.0
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 6.5e-22 110.9 1013 23.3
Lsat_1_v5_gn_3_6981 Lactuca sativa HOM05D006627 ORTHO05D007753 4.7e-20 104.8 1252 22.9
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 2.3e-19 102.4 1063 24.1
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 3.0e-19 102.1 130 49.2
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 5.1e-19 101.3 1067 24.1
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 3.3e-18 98.6 1018 24.7
ATR0681G260 Amborella trichopoda HOM05D000283 ORTHO05D006673 9.7e-18 97.1 239 33.1
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 1.7e-17 96.3 1164 23.3
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 2.8e-17 95.5 329 29.5
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 2.8e-17 95.5 1243 21.4
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 4.8e-17 94.7 189 33.9
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 8.2e-17 94.0 1190 22.6
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 1.4e-16 93.2 1180 23.6
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 1.8e-16 92.8 775 24.5
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 1.8e-16 92.8 174 35.1
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.1e-16 92.0 1381 23.9
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 4.1e-16 91.7 208 36.5
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.6e-15 89.0 1126 24.2
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 4.5e-15 88.2 741 23.9
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 2.2e-14 85.9 1085 23.2
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.1e-13 83.6 1107 23.1
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.5e-13 83.2 1100 23.4
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 2.5e-13 82.4 237 31.6
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 2.5e-13 82.4 303 32.3
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 4.2e-13 81.6 302 32.8
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 3.6e-12 78.6 227 36.1
HPP92_025630 Vanilla planifolia HOM05D006627 ORTHO05D007753 1.0e-11 77.0 226 30.1
Ah.07g206700 Amaranthus hybridus HOM05D006627 ORTHO05D007753 3.0e-11 75.5 751 22.8
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 1.1e-10 73.6 221 34.4
HPP92_028524 Vanilla planifolia HOM05D061474 ORTHO05D007753 1.5e-10 73.2 159 32.7
HPP92_028535 Vanilla planifolia HOM05D061474 ORTHO05D007753 1.5e-10 73.2 159 32.7
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 4.4e-10 71.6 834 21.8
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 7.4e-10 70.9 513 25.1
Zm00001eb179470 Zea mays HOM05D006627 ORTHO05D007753 7.4e-10 70.9 276 29.3
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 9.7e-10 70.5 234 33.3
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 9.7e-10 70.5 846 22.6
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 1.3e-09 70.1 235 33.6
Solyc03g025150.4 Solanum lycopersicum HOM05D006627 ORTHO05D007753 1.3e-09 70.1 843 21.9
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 2.2e-09 69.3 235 33.6
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 4.8e-09 68.2 235 33.2
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 3.1e-08 65.5 306 26.8
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 3.1e-08 65.5 510 25.1
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 4.1e-08 65.1 236 30.9
DCAR_009389 Daucus carota HOM05D006627 ORTHO05D007753 5.3e-08 64.7 728 25.0
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 5.3e-08 64.7 236 30.9
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 7.0e-08 64.3 283 27.2
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 7.0e-08 64.3 283 27.2
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 7.0e-08 64.3 236 30.9
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 7.0e-08 64.3 218 32.6
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 9.1e-08 63.9 235 33.2
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 9.1e-08 63.9 258 30.6
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 1.2e-07 63.5 226 33.2
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 1.6e-07 63.2 283 26.9
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 1.6e-07 63.2 235 32.3
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 2.0e-07 62.8 221 32.1
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 3.5e-07 62.0 286 26.9
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 3.5e-07 62.0 444 24.8
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 4.5e-07 61.6 283 26.1
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 4.5e-07 61.6 283 26.1
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 5.9e-07 61.2 230 33.0
unitig_46.g18802 Utricularia gibba HOM05D006627 ORTHO05D007753 7.7e-07 60.8 159 32.1
Carub.0007s1533 Capsella rubella HOM05D008661 ORTHO05D010872 1.0e-06 60.5 494 26.3
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.3e-06 60.1 249 31.3
CDE07G1237 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 1.7e-06 59.7 689 23.7
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 2.2e-06 59.3 230 30.4
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 2.9e-06 58.9 302 26.5
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 5.0e-06 58.2 726 22.3
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 5.0e-06 58.2 1020 23.3
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 5.0e-06 58.2 160 37.5
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 6.5e-06 57.8 263 30.0
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 8.5e-06 57.4 194 34.5
HPP92_028523 Vanilla planifolia HOM05D061972 ORTHO05D007753 8.5e-06 57.4 84 44.0


User provided reference genes

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