Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 2.6e-133 478.8 251 100.0
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 6.4e-92 341.3 246 75.6
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 3.8e-68 262.3 250 59.6
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 1.3e-60 237.3 252 57.5
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 4.6e-58 228.8 278 54.0
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.5e-53 213.8 267 50.9
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 2.1e-50 203.4 257 49.4
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 3.6e-50 202.6 258 48.4
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.8e-49 200.3 235 53.2
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 6.7e-49 198.4 261 49.4
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.8e-46 190.3 267 46.1
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 2.4e-46 189.9 259 46.3
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 9.1e-46 188.0 253 44.7
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 2.9e-44 183.0 258 46.9
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 1.4e-41 174.1 254 46.5
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 1.4e-41 174.1 258 45.3
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 5.2e-41 172.2 255 42.7
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 5.2e-41 172.2 255 42.7
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 5.2e-41 172.2 255 42.7
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 1.3e-39 167.5 266 46.6
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.7e-39 167.2 255 42.4
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 1.2e-37 161.0 246 47.2
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 1.2e-37 161.0 240 45.4
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 4.5e-37 159.1 110 72.7
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 5.9e-37 158.7 263 39.9
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 7.7e-37 158.3 247 42.1
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 1.0e-36 157.9 262 42.7
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 6.5e-36 155.2 333 35.4
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.2e-35 152.5 253 41.5
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 5.5e-35 152.1 251 43.4
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 7.2e-35 151.8 264 43.2
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 4.7e-34 149.1 260 40.8
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.0e-33 147.9 283 39.6
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.8e-33 147.1 108 66.7
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 2.3e-33 146.7 258 43.8
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 3.0e-33 146.4 261 41.4
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 4.0e-33 146.0 257 40.9
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 3.4e-32 142.9 223 43.5
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 5.7e-32 142.1 252 40.9
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 5.7e-32 142.1 109 63.3
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 9.8e-32 141.4 156 55.1
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 1.3e-31 141.0 254 41.3
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.7e-31 140.6 109 63.3
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 1.7e-31 140.6 100 68.0
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 2.8e-31 139.8 302 37.7
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 6.3e-31 138.7 253 40.3
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 6.3e-31 138.7 247 40.9
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.1e-30 137.9 251 41.0
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 3.1e-30 136.3 157 51.6
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 3.1e-30 136.3 285 37.5
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 4.1e-30 136.0 84 78.6
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 7.0e-30 135.2 193 46.6
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 1.2e-29 134.4 217 43.8
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 1.6e-29 134.0 241 40.2
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 2.7e-29 133.3 265 36.6
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.7e-29 133.3 100 63.0
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 4.5e-29 132.5 251 41.4
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 4.5e-29 132.5 100 62.0
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.7e-28 130.6 241 39.4
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.2e-28 130.2 100 61.0
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 2.9e-28 129.8 189 45.5
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 2.9e-28 129.8 105 61.0
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 1.1e-27 127.9 246 41.1
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 2.5e-27 126.7 114 59.6
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 3.2e-27 126.3 254 38.6
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 5.5e-27 125.6 282 37.6
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 9.4e-27 124.8 177 42.9
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 9.4e-27 124.8 165 46.7
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 8.0e-26 121.7 220 40.0
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 1.4e-25 120.9 261 37.2
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 2.3e-25 120.2 260 35.8
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 4.0e-25 119.4 256 38.3
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 4.4e-24 115.9 138 49.3
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 3.1e-22 109.8 240 37.5
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 2.0e-21 107.1 150 46.7
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 4.5e-21 105.9 81 60.5
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 7.7e-21 105.1 252 34.1
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 7.7e-21 105.1 252 34.1
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 2.9e-20 103.2 198 40.4
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 5.0e-20 102.4 198 39.4
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 6.6e-20 102.1 252 33.3
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 6.6e-20 102.1 97 53.6
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 3.3e-19 99.8 303 32.7
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 3.0e-17 93.2 168 41.1
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.4e-14 84.3 236 34.3
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 4.3e-11 72.8 241 29.0
COL.COLO4_10689 Corchorus olitorius HOM05D007666 ORTHO05D009567 1.2e-10 71.2 81 44.4
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 4.0e-09 66.2 141 34.0
DCAR_005040 Daucus carota HOM05D007666 ORTHO05D009567 8.9e-09 65.1 177 35.0
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 4.4e-08 62.8 94 38.3
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 1.3e-07 61.2 64 51.6
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 2.2e-07 60.5 245 27.8
Solyc08g082230.3 Solanum lycopersicum HOM05D007666 ORTHO05D009567 2.9e-07 60.1 154 34.4
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 6.4e-07 58.9 100 37.0
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 8.3e-07 58.5 99 33.3
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 2.4e-06 57.0 219 30.1
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 2.4e-06 57.0 96 35.4
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 2.4e-06 57.0 114 35.1


User provided reference genes

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