Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 3.5e-179 631.7 368 100.0
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.4e-119 433.7 360 73.3
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 4.3e-113 412.1 382 59.4
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.4e-111 406.4 367 70.3
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 5.0e-109 398.7 360 61.4
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 9.4e-108 394.4 334 72.5
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 1.0e-106 391.0 360 68.9
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 5.1e-106 388.7 346 70.2
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 5.1e-106 388.7 357 68.3
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.5e-105 387.1 365 66.6
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 2.6e-105 386.3 370 61.6
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.4e-103 379.8 358 65.6
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 9.1e-103 377.9 358 64.8
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 9.1e-103 377.9 334 73.1
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.5e-102 377.1 357 66.9
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.5e-102 377.1 358 62.6
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.0e-101 374.4 358 65.6
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.7e-101 373.6 385 59.2
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.1e-100 370.9 359 65.7
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 3.2e-100 369.4 358 63.1
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 7.2e-100 368.2 358 68.2
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 2.7e-99 366.3 359 66.3
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 2.7e-99 366.3 359 66.3
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 4.7e-99 365.5 336 70.8
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.3e-96 357.5 391 59.8
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 1.3e-96 357.5 359 64.9
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.7e-96 357.1 366 52.2
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 9.1e-95 351.3 359 64.1
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 2.6e-94 349.7 358 60.6
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 4.5e-94 349.0 328 67.7
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 5.9e-94 348.6 354 53.1
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 3.8e-93 345.9 326 68.1
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 5.0e-93 345.5 330 67.6
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.1e-92 344.4 328 67.1
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.5e-92 344.0 328 67.1
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.9e-92 343.6 359 61.6
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.9e-92 343.6 357 59.1
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 9.4e-92 341.3 382 54.7
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 2.7e-91 339.7 361 61.2
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 3.6e-91 339.3 356 56.2
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 4.0e-90 335.9 360 59.7
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.6e-89 333.2 358 60.3
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 1.4e-87 327.4 420 55.2
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.2e-86 324.3 360 59.2
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 5.9e-86 322.0 362 60.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 5.9e-86 322.0 352 62.5
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 5.0e-85 318.9 358 59.2
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 6.5e-85 318.5 357 59.7
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 2.7e-83 313.2 327 57.8
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 1.4e-82 310.8 336 63.4
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 3.0e-82 309.7 302 62.6
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 3.0e-82 309.7 358 58.1
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.0e-82 309.7 335 63.6
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 6.8e-82 308.5 329 59.9
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 1.2e-81 307.8 358 58.4
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 9.8e-81 304.7 251 81.7
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 1.3e-80 304.3 358 57.5
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.3e-80 304.3 360 57.5
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 1.3e-77 294.3 354 52.8
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 1.3e-77 294.3 354 52.8
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 5.0e-77 292.4 368 55.2
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 5.0e-77 292.4 327 60.6
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 6.6e-77 292.0 300 64.7
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 8.6e-77 291.6 360 55.3
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 8.6e-77 291.6 360 55.3
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 1.5e-76 290.8 388 56.2
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 2.5e-76 290.0 382 50.8
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 1.0e-74 284.6 322 62.1
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 1.0e-74 284.6 360 54.7
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 1.8e-74 283.9 359 55.4
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.2e-73 281.2 280 65.0
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 5.7e-73 278.9 386 52.8
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.1e-71 274.6 359 51.5
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 2.4e-71 273.5 360 52.5
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.3e-69 267.7 327 56.9
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 3.8e-69 266.2 336 57.1
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 2.1e-67 260.4 325 55.4
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.6e-67 259.6 377 42.2
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.6e-67 259.6 377 42.2
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.4e-66 257.7 325 55.4
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 1.8e-66 257.3 330 55.8
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.8e-66 257.3 327 54.4
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 5.2e-66 255.8 336 56.0
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 2.2e-64 250.4 279 62.7
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 6.4e-64 248.8 358 52.2
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 1.7e-61 240.7 352 50.6
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.9e-61 239.6 328 53.4
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 3.1e-58 229.9 332 53.3
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.7e-56 224.2 326 51.2
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.4e-55 221.1 329 49.8
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.2e-54 218.0 354 35.6
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 1.3e-53 214.5 329 50.2
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.9e-52 210.7 324 50.6
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 3.3e-52 209.9 323 49.2
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 9.5e-52 208.4 297 52.5
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 2.1e-51 207.2 357 41.7
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 2.1e-51 207.2 249 61.0
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 3.6e-51 206.5 315 51.4
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 2.0e-49 200.7 325 48.9
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 4.9e-48 196.1 327 49.5
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 6.0e-46 189.1 321 48.6
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 3.9e-37 159.8 321 42.4
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 6.2e-35 152.5 247 51.0
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 7.6e-33 145.6 146 58.9
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 7.8e-30 135.6 215 57.2
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.5e-25 121.3 176 45.5
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.9e-23 114.4 157 42.7
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 2.1e-22 110.9 196 40.3
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.9e-20 104.4 69 79.7
Actinidia27580 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.9e-07 61.2 98 46.9
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 4.2e-07 60.1 89 38.2
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 4.2e-07 60.1 49 63.3
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 5.5e-07 59.7 48 62.5
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 1.6e-06 58.2 48 60.4


User provided reference genes

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