Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.0e-145 519.2 289 100.0
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 8.0e-46 188.3 215 62.8
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 2.8e-38 163.3 218 52.3
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 6.1e-38 162.2 216 53.7
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.4e-37 161.0 218 54.6
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 3.1e-37 159.8 224 45.5
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 3.4e-36 156.4 220 53.6
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 2.2e-35 153.7 227 51.5
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 4.9e-35 152.5 215 52.1
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 8.3e-35 151.8 216 40.3
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 2.4e-34 150.2 221 51.6
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 4.1e-34 149.4 216 52.8
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 7.0e-34 148.7 213 42.3
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.3e-32 144.4 214 50.0
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.3e-32 144.4 210 51.9
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.0e-32 143.3 236 37.3
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 6.6e-32 142.1 219 45.2
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.1e-31 141.4 241 42.3
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 1.1e-31 141.4 200 54.0
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 2.5e-31 140.2 218 51.4
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 4.3e-31 139.4 201 40.8
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.3e-31 139.4 232 38.4
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 9.5e-31 138.3 212 49.1
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.2e-30 137.9 216 49.1
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.2e-30 137.9 223 48.4
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.6e-30 137.5 247 40.5
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 2.1e-30 137.1 230 47.0
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 2.1e-30 137.1 230 46.5
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.8e-30 136.7 217 47.0
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.6e-30 136.3 226 37.2
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 6.2e-30 135.6 209 53.1
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 6.2e-30 135.6 213 40.8
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.1e-29 134.8 248 45.6
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 1.1e-29 134.8 206 46.6
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.8e-29 134.0 216 47.7
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 4.0e-29 132.9 209 49.3
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 5.2e-29 132.5 208 51.0
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 8.9e-29 131.7 229 47.6
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 8.9e-29 131.7 228 44.7
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 1.2e-28 131.3 212 48.6
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 1.2e-28 131.3 218 46.3
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.5e-28 131.0 214 50.0
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 1.5e-28 131.0 229 44.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 2.6e-28 130.2 208 48.1
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 5.8e-28 129.0 216 48.1
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.3e-27 127.9 232 46.6
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.9e-27 126.7 237 41.4
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 6.4e-27 125.6 206 37.9
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 8.3e-27 125.2 210 49.0
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.1e-26 124.8 228 45.2
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.4e-26 124.4 228 43.9
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.9e-26 124.0 210 49.0
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.9e-26 124.0 209 47.8
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 2.4e-26 123.6 236 36.0
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 1.6e-25 120.9 208 48.1
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.1e-25 120.6 223 46.2
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 3.5e-25 119.8 218 46.3
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 4.6e-25 119.4 209 34.4
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 4.6e-25 119.4 209 46.9
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 6.0e-25 119.0 209 45.9
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.3e-24 117.9 187 40.6
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.7e-24 117.5 216 44.0
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 2.3e-24 117.1 213 46.0
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 3.9e-24 116.3 203 48.8
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 5.6e-23 112.5 220 45.0
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 7.3e-23 112.1 209 46.4
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 1.2e-22 111.3 217 44.2
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 2.8e-22 110.2 198 47.0
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.8e-21 107.5 229 42.8
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 5.2e-21 105.9 218 43.1
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.2e-20 104.8 210 43.8
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 2.0e-20 104.0 222 43.2
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.0e-20 104.0 215 44.2
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 9.9e-20 101.7 143 55.9
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.3e-19 101.3 194 32.5
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 2.2e-19 100.5 144 54.2
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 2.9e-19 100.1 144 55.6
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 3.7e-19 99.8 205 32.2
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 4.9e-19 99.4 171 50.3
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 4.1e-18 96.3 234 39.7
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 4.1e-18 96.3 234 39.7
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 4.1e-18 96.3 234 39.7
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.1e-18 96.3 131 43.5
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.1e-18 96.3 131 43.5
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 9.2e-18 95.1 229 41.5
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.5e-17 93.2 145 51.7
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.0e-16 91.7 212 38.7
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.0e-16 91.7 232 38.8
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 1.3e-16 91.3 199 43.2
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 5.1e-16 89.4 117 44.4
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 1.9e-15 87.4 216 39.4
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 1.9e-15 87.4 216 39.4
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 2.8e-14 83.6 228 38.6
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 2.4e-13 80.5 214 39.3
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 6.8e-13 79.0 211 39.8
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 2.0e-12 77.4 202 39.6
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 3.4e-12 76.6 163 31.9
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 2.2e-11 73.9 216 37.5
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 2.9e-11 73.6 206 38.8
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 2.9e-11 73.6 209 37.8
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 1.2e-09 68.2 105 35.2
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.8e-06 57.0 103 35.0


User provided reference genes

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