Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 2.1e-129 465.7 228 100.0
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 6.0e-97 357.8 225 80.4
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 1.6e-86 323.2 236 72.9
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 6.1e-81 304.7 226 69.0
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 3.3e-79 298.9 229 66.8
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 3.7e-78 295.4 229 65.5
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 4.8e-78 295.0 225 65.8
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 1.1e-77 293.9 227 66.1
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 3.1e-77 292.4 227 66.1
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 9.0e-77 290.8 227 66.5
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 1.5e-76 290.0 229 64.2
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 1.0e-75 287.3 227 65.6
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 2.2e-75 286.2 233 64.8
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.9e-75 285.8 179 78.8
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 5.0e-75 285.0 229 65.9
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 6.5e-75 284.6 233 63.9
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 7.2e-74 281.2 228 64.5
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 1.6e-73 280.0 238 60.9
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.6e-73 280.0 229 64.2
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 2.1e-73 279.6 236 61.9
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 7.9e-73 277.7 229 62.9
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 7.9e-73 277.7 230 62.2
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 1.0e-72 277.3 233 62.2
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 3.0e-72 275.8 211 68.2
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 3.9e-72 275.4 235 63.0
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 3.9e-72 275.4 226 65.0
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 6.7e-72 274.6 226 63.3
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 1.1e-71 273.9 228 61.8
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 1.1e-71 273.9 228 61.8
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 1.5e-71 273.5 230 63.5
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 3.3e-71 272.3 230 63.9
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 7.4e-71 271.2 171 78.4
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.3e-70 270.4 227 63.0
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 1.3e-70 270.4 238 61.8
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 1.3e-70 270.4 233 61.4
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 2.8e-70 269.2 232 58.6
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 3.7e-70 268.9 228 63.6
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 3.7e-70 268.9 230 63.5
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 6.3e-70 268.1 227 62.1
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 1.4e-69 266.9 228 62.7
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 2.4e-69 266.2 230 60.9
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 3.1e-69 265.8 234 64.1
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 4.1e-69 265.4 226 61.9
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 6.9e-69 264.6 242 59.1
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 9.1e-69 264.2 240 60.8
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 1.5e-68 263.5 236 60.2
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 3.4e-68 262.3 229 59.4
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 5.9e-68 261.5 234 59.4
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 1.0e-67 260.8 232 60.8
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.9e-67 259.2 236 58.5
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 5.0e-67 258.5 231 60.2
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 6.5e-67 258.1 230 57.8
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 1.4e-66 256.9 225 60.0
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.9e-66 256.5 226 57.1
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 1.9e-66 256.5 228 59.2
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.5e-66 256.1 231 58.4
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 2.5e-66 256.1 236 58.1
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.2e-66 255.8 236 58.1
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 2.1e-65 253.1 230 57.4
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 2.1e-65 253.1 232 59.1
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 2.7e-65 252.7 229 58.5
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 4.7e-65 251.9 230 57.4
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 6.1e-65 251.5 228 57.5
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 1.0e-64 250.8 227 56.8
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 5.1e-64 248.4 231 56.7
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 6.7e-64 248.1 216 61.6
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 8.8e-64 247.7 235 57.0
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.1e-63 247.3 236 56.8
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 1.5e-63 246.9 173 70.5
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.3e-63 245.7 236 56.8
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 4.4e-63 245.4 231 54.5
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 7.4e-63 244.6 226 55.8
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 2.8e-62 242.7 231 54.1
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.3e-62 241.5 236 55.5
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 6.3e-62 241.5 124 91.9
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 1.1e-61 240.7 228 54.8
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 1.4e-61 240.4 246 53.7
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 5.3e-61 238.4 228 55.3
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 7.0e-61 238.0 173 67.6
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 4.5e-60 235.3 228 54.8
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 1.0e-59 234.2 246 52.8
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 3.8e-59 232.3 226 56.6
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 8.5e-59 231.1 245 53.1
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.9e-58 229.9 226 56.2
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 2.1e-57 226.5 182 61.0
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 2.0e-55 219.9 231 50.2
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 3.3e-55 219.2 200 55.0
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.8e-54 216.1 231 52.4
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 1.4e-53 213.8 227 51.1
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 1.8e-53 213.4 191 57.1
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 2.4e-53 213.0 229 53.3
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 5.5e-50 201.8 227 51.5
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 1.8e-48 196.8 183 54.1
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.7e-46 189.1 226 50.0
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 2.5e-42 176.4 183 48.1
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 3.6e-41 172.6 183 49.2
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 7.5e-39 164.9 182 45.1
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 5.0e-35 152.1 182 45.6
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 8.0e-33 144.8 180 45.0
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 4.6e-28 129.0 225 41.3
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 4.6e-28 129.0 225 41.3
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 1.0e-27 127.9 161 46.6
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 2.3e-27 126.7 153 51.0
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 8.6e-27 124.8 167 44.9
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 8.6e-27 124.8 167 44.9
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 8.6e-27 124.8 167 44.9
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 2.5e-26 123.2 147 52.4
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 5.6e-26 122.1 158 47.5
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 7.3e-26 121.7 132 52.3
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 1.6e-25 120.6 150 48.7
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 4.7e-25 119.0 139 48.9
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 6.1e-25 118.6 142 48.6
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 8.9e-24 114.8 145 48.3
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 1.2e-23 114.4 148 45.9
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 1.5e-23 114.0 155 47.7
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 2.6e-23 113.2 147 44.2
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 2.9e-22 109.8 143 46.2
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 2.9e-22 109.8 155 46.5
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 1.1e-21 107.8 168 43.5
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 1.2e-20 104.4 100 57.0
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 1.6e-20 104.0 129 51.2
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 1.6e-20 104.0 114 50.0
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 7.8e-20 101.7 125 46.4
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 1.4e-08 64.3 54 59.3
Sabra10G0172600 Salix brachista HOM05D006578 ORTHO05D008100 2.2e-06 57.0 52 53.8


User provided reference genes

Program Settings