Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 2.8e-291 1004.6 523 100.0
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.6e-113 414.1 597 46.2
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 1.0e-70 271.9 784 31.0
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 6.5e-70 269.2 491 40.5
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 1.2e-63 248.4 593 35.2
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 8.5e-62 242.3 571 35.4
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 1.1e-61 241.9 200 66.5
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 1.9e-61 241.1 649 32.2
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 2.5e-61 240.7 501 36.5
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 1.7e-57 228.0 630 32.1
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 2.9e-54 217.2 509 35.0
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 3.8e-54 216.9 548 33.0
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 3.3e-50 203.8 244 49.2
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 3.8e-46 190.3 293 40.3
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 9.4e-45 185.7 190 54.2
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 8.0e-44 182.6 344 34.9
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 1.4e-43 181.8 135 65.9
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 5.2e-43 179.9 229 45.0
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 1.1e-42 178.7 139 61.9
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.0e-42 177.9 180 55.6
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 2.0e-42 177.9 570 30.5
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 2.0e-42 177.9 247 43.7
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 1.3e-41 175.3 516 31.4
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 2.2e-41 174.5 239 44.4
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 1.4e-40 171.8 501 31.5
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 3.1e-40 170.6 178 50.0
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 3.1e-40 170.6 324 38.3
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 5.3e-40 169.9 350 36.6
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 1.6e-39 168.3 603 29.9
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 3.5e-39 167.2 151 56.3
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 4.5e-39 166.8 356 35.7
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 4.5e-39 166.8 124 65.3
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 1.0e-38 165.6 175 53.1
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 3.8e-38 163.7 611 27.5
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 5.0e-38 163.3 610 28.2
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 2.5e-37 161.0 175 52.0
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 4.2e-37 160.2 177 50.8
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 5.5e-37 159.8 124 62.1
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.5e-37 159.8 124 62.1
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 7.2e-37 159.5 479 33.4
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 9.4e-37 159.1 157 54.8
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 2.1e-36 157.9 142 59.9
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.1e-36 157.9 464 29.5
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 4.7e-36 156.8 169 50.9
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 1.0e-35 155.6 144 55.6
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-35 155.2 185 49.7
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 1.4e-35 155.2 137 60.6
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 1.8e-35 154.8 182 49.5
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.8e-35 154.8 191 47.1
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 3.0e-35 154.1 179 50.3
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 4.0e-35 153.7 153 52.3
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.2e-35 153.3 176 50.0
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.7e-35 152.9 537 30.9
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 6.7e-35 152.9 159 50.3
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 2.6e-34 151.0 615 27.3
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 5.7e-34 149.8 134 59.7
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 1.3e-33 148.7 141 55.3
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-33 148.3 442 33.0
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 2.2e-33 147.9 204 45.1
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 8.3e-33 146.0 653 27.3
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.8e-32 144.8 166 48.2
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.8e-32 144.8 141 53.2
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 5.3e-32 143.3 614 27.0
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 9.1e-32 142.5 218 42.2
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 9.1e-32 142.5 162 48.1
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 4.5e-31 140.2 171 47.4
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 1.1e-29 135.6 443 30.2
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 2.1e-28 131.3 154 48.1
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 3.6e-28 130.6 206 39.3
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.6e-28 130.6 138 50.7
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 2.3e-27 127.9 107 57.9
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.0e-27 127.1 149 47.0
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 7.5e-26 122.9 106 58.5
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 2.8e-25 120.9 536 28.2
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 4.8e-25 120.2 139 45.3
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.8e-25 120.2 106 57.5
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.8e-25 120.2 106 57.5
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.1e-24 119.0 158 39.2
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 2.4e-24 117.9 163 47.9
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.5e-23 113.6 101 55.4
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-21 108.6 113 52.2
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 7.2e-21 106.3 169 40.8
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 1.6e-20 105.1 160 40.0
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.8e-20 104.4 249 35.7
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.0e-18 98.2 100 48.0
GSVIVG01019596001 Vitis vinifera HOM05D005777 ORTHO05D006854 2.0e-18 98.2 160 43.8
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 1.7e-17 95.1 171 35.1
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 2.2e-17 94.7 148 41.2
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 5.4e-16 90.1 95 48.4
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 5.4e-16 90.1 69 63.8
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 1.6e-15 88.6 245 31.4
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 2.3e-14 84.7 225 32.9
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 2.9e-14 84.3 97 46.4
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-14 84.0 122 41.0
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-14 84.0 120 41.7
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 6.6e-14 83.2 78 52.6
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.9e-13 81.6 122 41.0
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 2.5e-13 81.3 79 57.0
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.3e-13 80.9 122 41.0
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.3e-13 80.9 122 41.0
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-12 79.0 122 39.3
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 2.1e-12 78.2 86 40.7
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 3.6e-12 77.4 78 50.0
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.6e-12 77.4 122 40.2
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 6.1e-12 76.6 119 37.8
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 2.3e-11 74.7 112 37.5
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 4.0e-11 73.9 82 48.8
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 4.0e-11 73.9 77 50.6
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 6.8e-11 73.2 203 30.5
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.8e-11 73.2 86 43.0
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 8.9e-11 72.8 83 45.8
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 8.9e-11 72.8 83 45.8
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 1.5e-10 72.0 82 45.1
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 2.0e-10 71.6 82 45.1
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 5.8e-10 70.1 86 39.5
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 5.8e-10 70.1 67 47.8
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 9.8e-10 69.3 83 44.6
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 1.7e-09 68.6 82 45.1
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 2.2e-09 68.2 52 59.6
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.9e-09 67.8 70 45.7
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.7e-09 67.4 81 49.4
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 4.1e-08 63.9 43 60.5
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 2.7e-07 61.2 76 38.2
vmacro13880 Vaccinium macrocarpon HOM05D063747 ORTHO05D006854 4.6e-07 60.5 378 25.4


User provided reference genes

Program Settings