Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 0.0e+00 1117.8 555 100.0
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.3e-233 813.1 557 73.6
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.2e-212 743.4 561 68.3
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.1e-208 730.3 559 68.3
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 5.0e-206 721.5 545 68.1
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 6.6e-206 721.1 549 69.0
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 2.5e-205 719.2 566 66.1
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 7.3e-197 691.0 533 66.6
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 4.0e-195 685.3 549 64.7
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 1.3e-193 680.2 565 62.3
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 6.4e-193 677.9 545 63.1
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 5.4e-192 674.9 487 68.8
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 9.2e-192 674.1 557 62.5
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 2.1e-191 672.9 485 69.7
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 9.6e-189 664.1 557 62.3
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 2.8e-188 662.5 447 72.9
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 6.2e-188 661.4 544 63.2
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 8.1e-188 661.0 487 66.1
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 8.1e-188 661.0 544 61.2
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.4e-187 660.2 419 75.4
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 9.0e-187 657.5 549 61.9
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 3.4e-186 655.6 485 68.0
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 3.4e-186 655.6 525 61.7
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 4.4e-186 655.2 542 61.8
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 4.4e-186 655.2 527 63.8
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 2.2e-185 652.9 569 60.8
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 3.8e-185 652.1 485 67.8
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 2.1e-183 646.4 542 61.4
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 6.0e-183 644.8 542 61.4
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 8.7e-182 641.0 559 60.6
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.5e-181 640.2 543 61.7
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.5e-181 640.2 570 60.0
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 1.5e-181 640.2 516 63.2
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 5.6e-181 638.3 542 61.1
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.3e-180 637.1 564 59.8
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 2.8e-180 636.0 469 67.2
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.8e-179 633.3 540 60.4
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 6.9e-179 631.3 543 61.0
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 9.0e-179 630.9 474 66.2
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 3.4e-178 629.0 489 64.6
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 3.4e-178 629.0 544 59.7
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 3.8e-177 625.5 484 65.7
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 4.9e-177 625.2 516 61.2
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 1.1e-176 624.0 486 63.8
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 1.4e-176 623.6 581 58.0
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 7.1e-176 621.3 533 60.0
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 7.9e-175 617.8 482 61.4
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 7.9e-175 617.8 473 62.6
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 7.9e-175 617.8 473 62.8
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 2.3e-174 616.3 500 62.8
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 7.4e-173 611.3 430 68.1
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 7.4e-173 611.3 538 58.2
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 1.8e-171 606.7 479 64.5
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 2.0e-170 603.2 554 57.6
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 8.4e-169 597.8 481 60.1
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 8.4e-169 597.8 476 62.4
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 1.1e-168 597.4 426 69.2
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 4.2e-168 595.5 527 59.4
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 7.9e-167 591.3 528 58.1
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.8e-166 590.1 416 68.3
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 2.3e-166 589.7 478 61.9
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 5.1e-166 588.6 416 68.0
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.5e-165 587.0 421 66.5
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 1.4e-163 580.5 520 57.5
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 7.6e-162 574.7 511 57.7
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 2.2e-161 573.2 484 59.3
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 3.8e-161 572.4 396 66.4
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 6.5e-161 571.6 499 57.7
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 2.5e-160 569.7 542 55.4
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 2.7e-159 566.2 485 59.0
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 4.6e-159 565.5 480 59.2
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 2.3e-158 563.1 600 50.7
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 1.5e-157 560.5 387 70.0
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 1.9e-157 560.1 491 58.5
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 7.4e-157 558.1 482 57.7
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 8.2e-156 554.7 533 54.6
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 9.0e-155 551.2 483 58.4
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 5.0e-153 545.4 485 57.5
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 3.2e-152 542.7 485 57.3
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 4.2e-152 542.3 485 58.8
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 1.1e-149 534.3 455 58.0
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 4.8e-148 528.9 295 86.1
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 7.9e-143 511.5 361 64.3
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 7.4e-133 478.4 571 49.2
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 8.2e-132 474.9 308 72.7
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 2.4e-131 473.4 310 73.2
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 6.1e-127 458.8 480 47.1
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 9.1e-123 444.9 414 51.7
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.2e-122 444.5 385 54.0
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 1.6e-119 434.1 422 50.5
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 3.1e-115 419.9 572 46.0
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 3.8e-113 412.9 296 66.6
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 7.2e-112 408.7 265 78.9
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.8e-111 406.8 285 67.4
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 2.0e-109 400.6 299 65.6
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.5e-101 374.4 250 77.6
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 3.5e-98 363.2 232 74.6
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 1.0e-97 361.7 235 74.9
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.6e-95 354.4 488 41.8
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 1.6e-90 337.8 225 68.9
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 2.1e-90 337.4 389 44.0
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 4.6e-90 336.3 362 46.7
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 8.4e-76 288.9 494 38.1
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 4.7e-71 273.1 168 78.0
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 2.6e-69 267.3 305 47.5
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 4.5e-61 240.0 372 38.2
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.2e-50 205.3 292 36.3
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 2.5e-48 197.6 261 47.9
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 1.6e-47 194.9 245 45.7
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 8.2e-47 192.6 192 54.2
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 2.4e-46 191.0 249 46.2
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 6.0e-42 176.4 202 52.5
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 5.1e-41 173.3 110 77.3
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 3.3e-40 170.6 402 31.6
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 5.3e-38 163.3 391 29.9
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.6e-34 151.8 99 76.8
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.0e-28 132.5 91 72.5
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 3.8e-28 130.6 150 46.0
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 1.3e-23 115.5 201 41.3
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 1.5e-21 108.6 66 84.8
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 5.0e-20 103.6 98 52.0
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 8.2e-15 86.3 63 60.3
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-12 78.2 82 47.6
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 8.0e-10 69.7 35 74.3
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.4e-06 58.9 45 60.0


User provided reference genes

Program Settings