Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37369 Davidia involucrata HOM05D000747 ORTHO05D034282 2.3e-66 255.4 126 100.0
Hma1.2p1_0564F.1_g179090 Hydrangea macrophylla HOM05D000747 ORTHO05D007656 2.7e-46 188.7 123 77.2
Hma1.2p1_0564F.1_g179100 Hydrangea macrophylla HOM05D000747 ORTHO05D007656 2.7e-46 188.7 123 77.2
Lj2C125G13 Lonicera japonica HOM05D000747 ORTHO05D007656 2.3e-45 185.7 124 72.6
CSS0008408 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D007656 6.6e-45 184.1 123 75.6
Actinidia28937 Actinidia chinensis HOM05D002509 ORTHO05D007656 1.1e-44 183.3 123 74.0
CSS0041176 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D007656 5.6e-44 181.0 123 74.0
TAR633G1427 Trochodendron aralioides HOM05D000747 ORTHO05D007656 9.5e-44 180.3 122 73.0
QL07p041161 Quercus lobata HOM05D000747 ORTHO05D007656 2.6e-41 172.2 123 69.9
GSVIVG01033734001 Vitis vinifera HOM05D000747 ORTHO05D007656 1.3e-40 169.9 118 67.8
Cfa016498 Carpinus fangiana HOM05D000747 ORTHO05D007656 4.9e-40 167.9 123 65.9
FvH4_6g17370 Fragaria vesca HOM05D000747 ORTHO05D007656 1.1e-39 166.8 117 71.8
Haze_19502 Corylus avellana HOM05D000747 ORTHO05D007656 2.4e-39 165.6 123 65.9
FAN09G3532 Fragaria x ananassa HOM05D000747 ORTHO05D007656 5.4e-39 164.5 120 69.2
RcHm_v2.0_Chr3g0471541 Rosa chinensis HOM05D000747 ORTHO05D007656 7.1e-39 164.1 118 69.5
SalBow5G3738 Salvia bowleyana HOM05D000747 ORTHO05D007656 7.1e-39 164.1 119 68.1
MD12G1101300 Malus domestica HOM05D000747 ORTHO05D007656 9.2e-39 163.7 118 68.6
Potri.016G096500 Populus trichocarpa HOM05D000747 ORTHO05D007656 1.2e-38 163.3 118 68.6
FAN05G2234 Fragaria x ananassa HOM05D000747 ORTHO05D007656 1.6e-38 162.9 120 70.0
FAN05G4185 Fragaria x ananassa HOM05D000747 ORTHO05D007656 1.6e-38 162.9 120 70.0
CiPaw.09G006200 Carya illinoinensis HOM05D000747 ORTHO05D007656 4.6e-38 161.4 122 65.6
Sabra16G0100500 Salix brachista HOM05D000747 ORTHO05D007656 6.0e-38 161.0 118 67.8
DCAR_020792 Daucus carota HOM05D000140 ORTHO05D007656 7.8e-38 160.6 120 65.0
MD14G1095600 Malus domestica HOM05D000747 ORTHO05D007656 7.8e-38 160.6 118 67.8
Rhsim03G0085000 Rhododendron simsii HOM05D000747 ORTHO05D007656 1.0e-37 160.2 123 67.5
Solyc09g008700.2 Solanum lycopersicum HOM05D000747 ORTHO05D007656 3.9e-37 158.3 122 64.8
Sopen09g003500 Solanum pennellii HOM05D000747 ORTHO05D007656 5.1e-37 157.9 122 64.8
Prupe.7G121800 Prunus persica HOM05D000747 ORTHO05D007656 2.5e-36 155.6 120 65.0
Sc02g0001290 Simmondsia chinensis HOM05D000747 ORTHO05D007656 7.3e-36 154.1 119 60.5
Migut.L01736 Erythranthe guttata HOM05D000747 ORTHO05D007656 9.5e-36 153.7 120 67.5
Atru.chr8.1679 Acer truncatum HOM05D000747 ORTHO05D007656 2.1e-35 152.5 118 67.8
HanXRQChr13g0400251 Helianthus annuus HOM05D000747 ORTHO05D007656 2.1e-35 152.5 119 63.0
Peaxi162Scf00500g00219 Petunia axillaris HOM05D000747 ORTHO05D007656 2.8e-35 152.1 122 63.1
Thecc.05G077000 Theobroma cacao HOM05D000747 ORTHO05D007656 3.6e-35 151.8 118 61.0
vmacro07348 Vaccinium macrocarpon HOM05D000747 ORTHO05D007656 3.6e-35 151.8 117 65.8
Cc06_g04900 Coffea canephora HOM05D000747 ORTHO05D007656 4.7e-35 151.4 120 64.2
CAN.G1830.6 Capsicum annuum HOM05D000747 ORTHO05D007656 6.2e-35 151.0 123 62.6
Nn6g35131 Nelumbo nucifera HOM05D000747 ORTHO05D007656 3.1e-34 148.7 124 61.3
Lalb_Chr01g0018491 Lupinus albus HOM05D000747 ORTHO05D007656 5.2e-34 147.9 118 61.9
Nitab4.5_0003554g0010 Nicotiana tabacum HOM05D000747 ORTHO05D007656 6.8e-34 147.5 124 62.1
CANSAT80G1343 Cannabis sativa HOM05D000747 ORTHO05D007656 8.9e-34 147.1 118 61.9
TWI74G1020 Tripterygium wilfordii HOM05D000747 ORTHO05D007656 1.2e-33 146.7 121 60.3
MBI01_g23228_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D007656 5.8e-33 144.4 119 59.7
Manes.08G017600 Manihot esculenta HOM05D000747 ORTHO05D007656 7.6e-33 144.1 118 60.2
Nitab4.5_0006545g0010 Nicotiana tabacum HOM05D000747 ORTHO05D007656 9.9e-33 143.7 118 61.0
TPR.G31502 Trifolium pratense HOM05D000747 ORTHO05D007656 9.9e-33 143.7 118 55.9
Phvul.001G184300 Phaseolus vulgaris HOM05D000747 ORTHO05D007656 1.7e-32 142.9 118 61.9
Glyma.19G189100 Glycine max HOM05D000747 ORTHO05D007656 2.9e-32 142.1 118 61.9
Eucgr.A01586 Eucalyptus grandis HOM05D000747 ORTHO05D007656 3.7e-32 141.7 124 56.5
Glyma.03G188900 Glycine max HOM05D000747 ORTHO05D007656 3.7e-32 141.7 118 61.0
Medtr7g103210 Medicago truncatula HOM05D000747 ORTHO05D007656 4.9e-32 141.4 122 55.7
SGA_v2.0_scaffold277G46716 Striga asiatica HOM05D000747 ORTHO05D007656 4.9e-32 141.4 120 65.0
Lj1g0024972 Lotus japonicus HOM05D000747 ORTHO05D007656 8.4e-32 140.6 117 58.1
COL.COLO4_22271 Corchorus olitorius HOM05D000747 ORTHO05D007656 1.4e-31 139.8 118 57.6
Hund20723 Selenicereus undatus HOM05D000747 ORTHO05D007656 1.4e-31 139.8 117 60.7
Aqoxy2G01524 Aquilegia oxysepala HOM05D000747 ORTHO05D007656 2.4e-31 139.0 119 58.0
Lsat_1_v5_gn_6_29141 Lactuca sativa HOM05D000747 ORTHO05D007656 4.1e-31 138.3 116 58.6
Cpa.g.sc5.113 Carica papaya HOM05D000747 ORTHO05D007656 1.2e-30 136.7 123 55.3
Ca_08946_v3 Cicer arietinum L. HOM05D000747 ORTHO05D007656 1.6e-30 136.3 128 55.5
Gorai.002G245000 Gossypium raimondii HOM05D000747 ORTHO05D007656 6.0e-30 134.4 117 54.7
arahy.Tifrunner.gnm1.ann1.MP0EZL Arachis hypogaea HOM05D000747 ORTHO05D007656 7.8e-30 134.0 116 60.3
Gohir.A01G211500 Gossypium hirsutum HOM05D000747 ORTHO05D007656 7.8e-30 134.0 117 54.7
arahy.Tifrunner.gnm1.ann1.KKMU7F Arachis hypogaea HOM05D000747 ORTHO05D007656 1.3e-29 133.3 116 60.3
Gohir.D01G200300 Gossypium hirsutum HOM05D000747 ORTHO05D007656 3.0e-29 132.1 117 54.7
AUR62040177 Chenopodium quinoa HOM05D000747 ORTHO05D007656 5.1e-29 131.3 118 57.6
EL10Ac7g16731 Beta vulgaris HOM05D000747 ORTHO05D007656 2.5e-28 129.0 118 57.6
AUR62037922 Chenopodium quinoa HOM05D000747 ORTHO05D007656 2.5e-28 129.0 116 57.8
Psat3g037640 Pisum sativum HOM05D000747 ORTHO05D007656 3.3e-28 128.6 118 52.5
CsaV3_3G036630 Cucumis sativus L. HOM05D000747 ORTHO05D007656 4.7e-27 124.8 120 52.5
PSO339G4004 Papaver somniferum HOM05D000747 ORTHO05D007656 6.2e-27 124.4 119 51.3
MELO3C009417.2 Cucumis melo HOM05D000747 ORTHO05D007656 1.1e-26 123.6 120 52.5
Ah.08g211170 Amaranthus hybridus HOM05D000747 ORTHO05D007656 2.4e-26 122.5 118 55.1
Sed0020895 Sechium edule HOM05D000747 ORTHO05D007656 5.2e-26 121.3 116 53.4
PSO801G0354 Papaver somniferum HOM05D000747 ORTHO05D007656 8.9e-26 120.6 119 52.1
ClCG10G019570 Citrullus lanatus HOM05D000747 ORTHO05D007656 3.4e-25 118.6 131 48.1
Ciclev10010940m.g Citrus clementina HOM05D000747 ORTHO05D007656 9.9e-25 117.1 84 66.7
A04p06290 Brassica napus HOM05D000747 ORTHO05D007656 1.7e-24 116.3 117 50.4
BraA04t16334Z Brassica rapa HOM05D000747 ORTHO05D007656 1.7e-24 116.3 117 50.4
PGR004G0414 Punica granatum HOM05D000747 ORTHO05D007656 1.7e-24 116.3 120 50.0
CARHR162940 Cardamine hirsuta HOM05D000747 ORTHO05D007656 2.9e-24 115.5 117 53.0
ECA233G1002 Erigeron canadensis HOM05D000747 ORTHO05D007656 3.8e-24 115.2 98 57.1
BolC4t25555H Brassica oleracea HOM05D000747 ORTHO05D007656 2.4e-23 112.5 117 49.6
ATR0665G301 Amborella trichopoda HOM05D000747 ORTHO05D007656 3.2e-23 112.1 121 47.9
Thhalv10010078m.g Eutrema salsugineum HOM05D000747 ORTHO05D007656 4.2e-23 111.7 117 50.4
AT3G53090 Arabidopsis thaliana HOM05D000747 ORTHO05D007656 5.4e-23 111.3 117 49.6
AL5G33970 Arabidopsis lyrata HOM05D000747 ORTHO05D007656 1.2e-22 110.2 116 50.9
BcaC02g09186 Brassica carinata HOM05D000747 ORTHO05D007656 2.1e-22 109.4 117 48.7
C04p39810 Brassica napus HOM05D000747 ORTHO05D007656 2.1e-22 109.4 117 48.7
Sp5g09230 Schrenkiella parvula HOM05D000747 ORTHO05D007656 6.0e-22 107.8 117 48.7
Aa31LG10G8250 Aethionema arabicum HOM05D000747 ORTHO05D007656 1.0e-21 107.1 116 49.1
THA.LOC104827502 Tarenaya hassleriana HOM05D000747 ORTHO05D007656 1.3e-21 106.7 119 48.7
BcaB02g08538 Brassica carinata HOM05D000747 ORTHO05D007656 1.7e-21 106.3 117 48.7
SEGI_31913 Sequoiadendron giganteum HOM05D000747 ORTHO05D007656 1.9e-20 102.8 132 43.9
Zm00001eb217270 Zea mays HOM05D000747 ORTHO05D007656 1.3e-19 100.1 117 47.9
SHI27766 Sapria himalayana HOM05D005377 ORTHO05D034282 3.2e-15 85.5 92 47.8
CDE02G2592 Ceratophyllum demersum HOM05D000747 ORTHO05D034282 4.6e-14 81.6 76 47.4
Carub.0005s1961 Capsella rubella HOM05D000747 ORTHO05D007656 1.5e-12 76.6 78 50.0
HPP92_010012 Vanilla planifolia HOM05D000747 ORTHO05D014617 1.5e-12 76.6 78 50.0
FAN02G3129 Fragaria x ananassa HOM05D000747 ORTHO05D007656 5.6e-12 74.7 55 69.1
Mapoly0088s0076 Marchantia polymorpha HOM05D000747 ORTHO05D007656 5.6e-12 74.7 126 34.1
Pp3c6_23490 Physcomitrium patens HOM05D000747 ORTHO05D007656 8.1e-11 70.9 135 35.6
Pp3c25_6380 Physcomitrium patens HOM05D000747 ORTHO05D007656 1.8e-10 69.7 134 36.6
Pp3c16_5120 Physcomitrium patens HOM05D000747 ORTHO05D007656 3.1e-10 68.9 134 35.1
AagrBONN_evm.TU.Sc2ySwM_344.2314 Anthoceros agrestis HOM05D000747 ORTHO05D007656 6.9e-10 67.8 133 33.8
SMO119G0395 Selaginella moellendorffii HOM05D000747 ORTHO05D007656 7.6e-09 64.3 124 31.5


User provided reference genes

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