Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 2.2e-282 974.9 481 100.0
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 2.1e-245 852.0 452 93.1
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 1.7e-226 789.3 452 85.6
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 2.1e-224 782.3 453 84.3
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.6e-222 775.4 452 84.1
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 5.7e-222 774.2 453 85.2
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.8e-220 769.2 452 84.1
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 1.2e-216 756.5 486 77.6
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 4.4e-214 748.0 452 81.0
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 1.7e-213 746.1 452 80.1
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 6.3e-213 744.2 452 82.5
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 8.2e-213 743.8 452 81.2
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 1.6e-211 739.6 452 80.5
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 5.9e-211 737.6 452 81.6
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 7.7e-211 737.3 452 80.3
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 1.3e-210 736.5 452 79.9
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 1.7e-210 736.1 452 80.3
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 3.8e-210 734.9 452 79.9
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 8.5e-210 733.8 452 81.2
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 8.5e-210 733.8 452 80.3
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 7.2e-209 730.7 452 81.0
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 7.2e-209 730.7 452 80.3
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 2.7e-208 728.8 452 80.1
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 2.6e-206 722.2 452 79.6
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 4.4e-206 721.5 452 79.9
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 2.2e-205 719.2 453 79.7
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 2.8e-205 718.8 454 77.3
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 3.7e-205 718.4 452 78.8
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 3.7e-205 718.4 452 78.5
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 3.7e-205 718.4 539 69.4
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 4.8e-205 718.0 452 78.1
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 6.3e-205 717.6 452 80.8
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 1.1e-204 716.8 461 78.5
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 1.1e-204 716.8 452 80.5
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 3.1e-204 715.3 452 77.7
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 3.1e-204 715.3 454 76.9
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 5.3e-204 714.5 452 78.3
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 7.0e-204 714.1 451 77.8
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 1.2e-203 713.4 454 79.5
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 1.6e-203 713.0 452 78.1
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 4.5e-203 711.4 454 78.2
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 7.7e-203 710.7 452 79.6
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 7.7e-203 710.7 466 75.1
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 7.7e-203 710.7 452 77.2
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.0e-202 710.3 454 78.2
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 1.3e-202 709.9 452 77.2
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 3.8e-202 708.4 452 78.3
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 1.1e-201 706.8 453 77.5
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 3.2e-201 705.3 452 76.8
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 5.5e-201 704.5 452 74.3
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 2.1e-200 702.6 452 76.8
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 3.6e-200 701.8 452 76.5
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 3.6e-200 701.8 452 77.0
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 3.6e-200 701.8 452 77.7
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 8.0e-200 700.7 452 77.2
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 1.8e-199 699.5 452 76.8
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 5.2e-199 698.0 452 77.2
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 5.2e-199 698.0 452 77.7
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 2.0e-198 696.0 452 77.4
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 2.6e-198 695.7 453 76.4
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 1.7e-197 693.0 454 76.7
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 2.8e-197 692.2 454 74.7
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 7.0e-196 687.6 490 70.8
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 7.0e-196 687.6 452 75.2
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 1.2e-195 686.8 460 75.0
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 7.7e-195 684.1 452 75.9
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 1.3e-194 683.3 490 70.4
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 5.0e-194 681.4 452 75.4
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 6.6e-194 681.0 454 75.8
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 1.1e-193 680.2 452 75.7
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 1.5e-193 679.9 452 75.7
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 3.3e-193 678.7 452 75.4
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 9.5e-193 677.2 452 73.5
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 1.6e-192 676.4 453 75.7
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 1.6e-192 676.4 453 75.7
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 1.6e-192 676.4 453 75.7
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 2.8e-192 675.6 452 74.1
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 3.6e-192 675.2 453 75.5
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 3.6e-192 675.2 452 74.6
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 4.7e-192 674.9 453 74.8
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 6.1e-192 674.5 452 75.4
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 6.1e-192 674.5 452 75.9
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 1.0e-191 673.7 452 75.7
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 1.0e-191 673.7 452 74.8
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 2.3e-191 672.5 454 74.7
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 3.0e-191 672.2 452 75.7
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 3.0e-191 672.2 452 75.2
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 3.0e-191 672.2 452 74.1
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 4.0e-191 671.8 455 75.8
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 5.2e-191 671.4 453 74.6
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 6.8e-191 671.0 460 73.3
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 8.9e-191 670.6 455 74.1
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.0e-190 669.5 452 72.8
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 5.7e-190 667.9 452 74.6
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 7.5e-190 667.5 505 68.5
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 9.8e-190 667.2 453 74.2
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 2.2e-189 666.0 420 79.3
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 8.3e-189 664.1 452 74.6
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.1e-188 663.7 457 73.7
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.4e-188 663.3 452 73.0
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 3.1e-188 662.1 422 77.5
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.2e-187 660.2 452 74.1
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.0e-187 659.4 452 75.0
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 2.7e-187 659.1 452 73.2
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.7e-187 659.1 452 75.0
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 6.6e-186 654.4 422 77.5
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 6.1e-184 647.9 452 72.3
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 8.0e-184 647.5 416 76.7
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 1.0e-183 647.1 452 71.9
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 6.8e-183 644.4 526 63.5
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 2.0e-179 632.9 411 77.1
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 3.5e-179 632.1 462 69.5
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 4.6e-179 631.7 452 70.1
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.0e-178 629.0 452 71.7
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.0e-178 629.0 452 71.7
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 5.0e-178 628.2 452 69.5
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 1.9e-177 626.3 464 71.3
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 1.9e-177 626.3 405 76.8
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 2.5e-177 625.9 456 69.1
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 3.7e-173 612.1 452 68.1
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 8.9e-167 590.9 454 67.4
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 7.5e-166 587.8 404 73.0
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 3.6e-160 568.9 342 79.8
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 2.4e-156 556.2 342 79.5
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 1.5e-150 537.0 444 64.4
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 1.3e-149 533.9 463 58.7
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 7.1e-148 528.1 422 62.8
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 1.9e-145 520.0 457 60.4
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 1.3e-144 517.3 470 57.0
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 2.1e-144 516.5 602 50.2
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 6.9e-135 485.0 451 58.8
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 1.7e-133 480.3 273 83.2
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 3.3e-121 439.5 279 76.0
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 7.4e-121 438.3 275 80.7
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 4.3e-113 412.5 280 73.6
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 2.0e-94 350.5 248 71.0
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 3.1e-87 326.6 240 66.2
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 2.0e-81 307.4 243 63.8
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 8.3e-64 248.8 150 80.7
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 3.9e-61 240.0 157 80.3
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 8.1e-59 232.3 504 31.7
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 1.4e-58 231.5 392 35.2
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 1.0e-53 215.3 356 43.0
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 6.0e-46 189.5 121 73.6
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 1.0e-45 188.7 137 68.6
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.0e-45 188.7 189 53.4
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 1.0e-37 162.2 111 75.7
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 6.9e-34 149.4 251 39.8
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 1.5e-33 148.3 187 41.2
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 2.0e-33 147.9 251 39.4
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 5.1e-29 133.3 68 89.7
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 3.1e-26 124.0 101 68.3
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 2.4e-18 97.8 170 30.0
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 2.4e-18 97.8 79 64.6
CBR_g4033 Chara braunii HOM05D004402 ORTHO05D005314 5.5e-15 86.7 113 46.9
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.5e-12 78.6 86 50.0
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 3.3e-12 77.4 82 51.2
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 3.7e-11 73.9 147 34.7
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 2.4e-10 71.2 52 69.2
Cfa025539 Carpinus fangiana HOM05D003439 ORTHO05D004062 2.6e-09 67.8 126 33.3
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.6e-09 67.8 36 88.9
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 3.2e-07 60.8 36 75.0
ECA233G2956 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-06 57.0 109 40.4


User provided reference genes

Program Settings