Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37282 Davidia involucrata HOM05D007382 ORTHO05D009012 1.6e-111 406.0 195 100.0
CSS0017861 Camellia sinensis var. sinensis HOM05D007382 ORTHO05D009012 1.5e-56 223.4 143 74.8
Hma1.2p1_0111F.1_g053520 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 5.8e-56 221.5 150 72.0
Hma1.2p1_0111F.1_g053480 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 5.0e-52 208.4 146 69.9
GSVIVG01025574001 Vitis vinifera HOM05D002855 ORTHO05D009676 5.0e-52 208.4 176 60.8
TAR369G0081 Trochodendron aralioides HOM05D007382 ORTHO05D009012 2.1e-50 203.0 156 64.7
Ciclev10012925m.g Citrus clementina HOM05D007382 ORTHO05D009012 8.9e-49 197.6 156 60.9
Oeu029114.1 Olea europaea HOM05D007382 ORTHO05D009012 7.5e-48 194.5 154 64.3
Haze_20685 Corylus avellana HOM05D007382 ORTHO05D009012 3.7e-47 192.2 152 63.8
Cfa017470 Carpinus fangiana HOM05D007382 ORTHO05D009012 4.9e-47 191.8 167 58.1
Prupe.6G245200 Prunus persica HOM05D007382 ORTHO05D009012 8.3e-47 191.0 158 59.5
Nitab4.5_0007103g0020 Nicotiana tabacum HOM05D007382 ORTHO05D009012 4.1e-46 188.7 148 60.1
CiPaw.10G139200 Carya illinoinensis HOM05D007382 ORTHO05D009012 7.1e-46 188.0 152 63.8
Nitab4.5_0000202g0370 Nicotiana tabacum HOM05D007382 ORTHO05D009012 3.5e-45 185.7 148 60.1
QL07p045887 Quercus lobata HOM05D007382 ORTHO05D009012 3.5e-45 185.7 152 62.5
Thecc.05G050100 Theobroma cacao HOM05D007382 ORTHO05D009012 7.8e-45 184.5 155 61.9
Peaxi162Scf00472g00081 Petunia axillaris HOM05D007382 ORTHO05D009012 5.1e-44 181.8 152 59.2
CAN.G435.4 Capsicum annuum HOM05D007382 ORTHO05D009012 5.6e-43 178.3 144 59.0
Duzib093G1372 Durio zibethinus HOM05D007382 ORTHO05D009012 7.3e-43 177.9 163 59.5
HanXRQChr07g0195861 Helianthus annuus HOM05D007382 ORTHO05D009012 3.6e-42 175.6 147 56.5
MSTRG.19120 Avicennia marina HOM05D007382 ORTHO05D009012 4.7e-42 175.3 122 68.0
Sabra06G0166500 Salix brachista HOM05D007382 ORTHO05D009012 1.4e-41 173.7 147 63.9
Nn2g10574 Nelumbo nucifera HOM05D007382 ORTHO05D009012 1.8e-41 173.3 162 55.6
ECA238G1385 Erigeron canadensis HOM05D007382 ORTHO05D009012 2.4e-41 172.9 145 57.9
Lsat_1_v5_gn_2_111101 Lactuca sativa HOM05D007382 ORTHO05D009012 2.4e-41 172.9 138 58.7
AUR62042292 Chenopodium quinoa HOM05D002855 ORTHO05D009012 3.1e-41 172.6 127 67.7
Potri.006G216000 Populus trichocarpa HOM05D007382 ORTHO05D009012 3.1e-41 172.6 146 63.7
Sopen10g033880 Solanum pennellii HOM05D007382 ORTHO05D009012 4.0e-41 172.2 136 58.1
SGA_v2.0_scaffold126G33863 Striga asiatica HOM05D007382 ORTHO05D009012 4.0e-41 172.2 154 54.5
Nn3g20330 Nelumbo nucifera HOM05D007382 ORTHO05D009012 5.2e-41 171.8 170 54.7
Eucgr.A01209 Eucalyptus grandis HOM05D007382 ORTHO05D009012 6.8e-41 171.4 158 57.0
Lsat_1_v5_gn_2_110741 Lactuca sativa HOM05D007382 ORTHO05D009012 6.8e-41 171.4 138 58.0
Migut.J00393 Erythranthe guttata HOM05D007382 ORTHO05D009012 8.9e-41 171.0 150 58.7
Manes.09G071800 Manihot esculenta HOM05D007382 ORTHO05D009012 8.9e-41 171.0 168 56.5
MBI04_g28758_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 3.4e-40 169.1 154 57.8
MBI04_g38440_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 3.4e-40 169.1 154 57.8
MD12G1130200 Malus domestica HOM05D007382 ORTHO05D009012 3.4e-40 169.1 153 57.5
PGSC0003DMG401010988 Solanum tuberosum HOM05D007382 ORTHO05D009012 3.4e-40 169.1 136 57.4
COL.COLO4_10307 Corchorus olitorius HOM05D007382 ORTHO05D009012 1.3e-39 167.2 149 56.4
FAN05G3594 Fragaria x ananassa HOM05D007382 ORTHO05D009012 1.3e-39 167.2 156 53.2
Solyc10g084440.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 2.9e-39 166.0 135 56.3
FvH4_6g14870 Fragaria vesca HOM05D007382 ORTHO05D009012 3.8e-39 165.6 151 53.6
HanXRQChr10g0297271 Helianthus annuus HOM05D007382 ORTHO05D009012 3.8e-39 165.6 145 53.8
AUR62036838 Chenopodium quinoa HOM05D007382 ORTHO05D009012 4.9e-39 165.2 178 52.2
Cc06_g15490 Coffea canephora HOM05D007382 ORTHO05D009012 6.4e-39 164.9 137 59.1
MELO3C003080.2 Cucumis melo HOM05D007382 ORTHO05D009012 6.4e-39 164.9 158 55.7
FAN14G4413 Fragaria x ananassa HOM05D002855 ORTHO05D009012 6.4e-39 164.9 151 53.6
Lsat_1_v5_gn_2_110841 Lactuca sativa HOM05D007382 ORTHO05D009012 6.4e-39 164.9 138 55.8
CANSAT80G2903 Cannabis sativa HOM05D007382 ORTHO05D009012 8.4e-39 164.5 155 56.1
RcHm_v2.0_Chr3g0468081 Rosa chinensis HOM05D007382 ORTHO05D009012 1.4e-38 163.7 156 51.3
Gohir.D04G117000 Gossypium hirsutum HOM05D007382 ORTHO05D009012 1.9e-38 163.3 129 63.6
Gorai.009G421900 Gossypium raimondii HOM05D007382 ORTHO05D009012 1.9e-38 163.3 129 63.6
ClCG04G008690 Citrullus lanatus HOM05D007382 ORTHO05D009012 3.2e-38 162.5 151 55.6
FAN09G0189 Fragaria x ananassa HOM05D007382 ORTHO05D009012 3.2e-38 162.5 156 51.3
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.2e-38 162.5 156 51.3
Sc01g0003740 Simmondsia chinensis HOM05D007382 ORTHO05D009012 3.2e-38 162.5 167 52.7
Ca_08808_v3 Cicer arietinum L. HOM05D007382 ORTHO05D009012 7.1e-38 161.4 151 51.7
CsaV3_4G024470 Cucumis sativus L. HOM05D007382 ORTHO05D009012 7.1e-38 161.4 137 60.6
Gohir.A04G077800 Gossypium hirsutum HOM05D007382 ORTHO05D009012 7.1e-38 161.4 129 63.6
PGSC0003DMG400038088 Solanum tuberosum HOM05D007382 ORTHO05D009012 9.2e-38 161.0 116 62.1
EL10Ac7g17270 Beta vulgaris HOM05D007382 ORTHO05D009012 4.6e-37 158.7 141 57.4
Sopen09g026050 Solanum pennellii HOM05D007382 ORTHO05D009012 1.3e-36 157.1 125 59.2
Glyma.03G175900 Glycine max HOM05D007382 ORTHO05D009012 1.7e-36 156.8 153 52.9
Sed0019756 Sechium edule HOM05D007382 ORTHO05D009012 1.7e-36 156.8 147 55.8
Hund10951 Selenicereus undatus HOM05D007382 ORTHO05D009012 1.7e-36 156.8 176 50.6
PGSC0003DMG400037466 Solanum tuberosum HOM05D007382 ORTHO05D009012 3.9e-36 155.6 118 58.5
Ah.08g212080 Amaranthus hybridus HOM05D007382 ORTHO05D009012 2.5e-35 152.9 141 58.9
Sopen07g005520 Solanum pennellii HOM05D007382 ORTHO05D009012 4.3e-35 152.1 124 58.1
Solyc07g014660.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 9.6e-35 151.0 117 59.8
TWI77G0838 Tripterygium wilfordii HOM05D007382 ORTHO05D009012 2.1e-34 149.8 126 63.5
Phvul.001G173000 Phaseolus vulgaris HOM05D007382 ORTHO05D009012 4.7e-34 148.7 145 51.7
Glyma.19G176400 Glycine max HOM05D007382 ORTHO05D009012 1.1e-33 147.5 161 52.2
CiPaw.15G123900 Carya illinoinensis HOM05D007382 ORTHO05D009012 1.8e-33 146.7 165 47.9
VMungo1383G3160 Vigna mungo HOM05D007382 ORTHO05D009012 2.4e-33 146.4 151 49.0
Sed0025265 Sechium edule HOM05D007382 ORTHO05D009012 5.2e-33 145.2 146 53.4
Aa31LG10G12820 Aethionema arabicum HOM05D007382 ORTHO05D009012 9.0e-33 144.4 129 55.8
PSO384G2862 Papaver somniferum HOM05D007382 ORTHO05D009012 2.0e-32 143.3 164 47.6
Medtr7g100230 Medicago truncatula HOM05D007382 ORTHO05D009012 2.6e-32 142.9 154 46.8
Carub.0005s2494 Capsella rubella HOM05D007382 ORTHO05D009012 5.8e-32 141.7 131 55.0
AL5G39780 Arabidopsis lyrata HOM05D007382 ORTHO05D009012 7.6e-32 141.4 130 55.4
Psat7g058560 Pisum sativum HOM05D007382 ORTHO05D009012 1.3e-31 140.6 123 53.7
ATR0709G053 Amborella trichopoda HOM05D007382 ORTHO05D009012 2.2e-31 139.8 127 54.3
BcaC02g09988 Brassica carinata HOM05D007382 ORTHO05D009012 8.4e-31 137.9 129 51.9
BcaB02g08277 Brassica carinata HOM05D007382 ORTHO05D009012 1.4e-30 137.1 129 51.2
Sp5g04630 Schrenkiella parvula HOM05D007382 ORTHO05D009012 1.9e-30 136.7 126 54.0
Medtr7g100200 Medicago truncatula HOM05D007382 ORTHO05D009012 2.4e-30 136.3 145 45.5
Aqoxy5G00351 Aquilegia oxysepala HOM05D007382 ORTHO05D009012 4.2e-30 135.6 143 51.0
CDE05G2022 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 7.1e-30 134.8 118 54.2
CARHR168440 Cardamine hirsuta HOM05D007382 ORTHO05D009012 7.8e-29 131.3 119 53.8
TPR.G21464 Trifolium pratense HOM05D007382 ORTHO05D009012 1.5e-27 127.1 179 41.9
Zm00001eb148770 Zea mays HOM05D007382 ORTHO05D009012 1.9e-27 126.7 118 55.9
Lj1g0005181 Lotus japonicus HOM05D007382 ORTHO05D009012 3.6e-26 122.5 153 45.1
AT3G58090 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 1.4e-25 120.6 110 55.5
C04p34300 Brassica napus HOM05D000180 ORTHO05D000099 6.9e-25 118.2 100 56.0
AUR62043938 Chenopodium quinoa HOM05D002855 ORTHO05D004406 1.2e-24 117.5 119 55.5
BolC4t24990H Brassica oleracea HOM05D000180 ORTHO05D000099 1.5e-24 117.1 100 56.0
A04p02730 Brassica napus HOM05D000180 ORTHO05D000099 2.2e-23 113.2 109 52.3
BraA04t15999Z Brassica rapa HOM05D000180 ORTHO05D000099 2.2e-23 113.2 109 52.3
Os01g0835600 Oryza sativa ssp. japonica HOM05D007382 ORTHO05D009012 2.9e-23 112.8 114 47.4
unitig_744.g24666 Utricularia gibba HOM05D007382 ORTHO05D009012 3.8e-23 112.5 142 45.1
HPP92_019795 Vanilla planifolia HOM05D007382 ORTHO05D009012 4.2e-22 109.0 122 45.9
SEGI_34495 Sequoiadendron giganteum HOM05D007382 ORTHO05D009012 1.2e-21 107.5 156 41.7
PGSC0003DMG400035622 Solanum tuberosum HOM05D007382 ORTHO05D009012 1.6e-21 107.1 106 47.2
VMungo1080G1211 Vigna mungo HOM05D007382 ORTHO05D009012 1.3e-20 104.0 78 60.3
CDE09G1151 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 8.1e-18 94.7 142 35.9
Lalb_Chr20g0113021 Lupinus albus HOM05D007382 ORTHO05D009012 5.3e-17 92.0 192 30.7
Lalb_Chr25g0289341 Lupinus albus HOM05D007382 ORTHO05D009012 3.2e-14 82.8 95 45.3
CDE12G0689 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 4.2e-14 82.4 65 50.8
SEGI_03776 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 1.6e-10 70.5 54 57.4
TAR633G0943 Trochodendron aralioides HOM05D007382 ORTHO05D009012 2.1e-10 70.1 86 44.2
ATR0829G079 Amborella trichopoda HOM05D016889 ORTHO05D026570 4.8e-10 68.9 63 50.8
ATR0665G317 Amborella trichopoda HOM05D007382 ORTHO05D009012 6.2e-10 68.6 52 59.6
SMO147G0006 Selaginella moellendorffii HOM05D016889 ORTHO05D026570 3.4e-08 62.8 54 57.4
CBR_g41746 Chara braunii HOM05D007382 ORTHO05D009012 5.8e-08 62.0 55 50.9
Pp3c14_21840 Physcomitrium patens HOM05D016889 ORTHO05D009012 2.2e-07 60.1 78 44.9
COL.COLO4_19275 Corchorus olitorius HOM05D001312 ORTHO05D001832 6.5e-07 58.5 94 41.5
SEGI_22784 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 1.1e-06 57.8 73 41.1
Thecc.09G293200 Theobroma cacao HOM05D001312 ORTHO05D001832 1.4e-06 57.4 89 43.8
Pp3c17_18030 Physcomitrium patens HOM05D016889 ORTHO05D026570 3.2e-06 56.2 56 48.2
Duzib168G2332 Durio zibethinus HOM05D001312 ORTHO05D001832 9.3e-06 54.7 51 56.9


User provided reference genes

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