Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 4.5e-73 278.1 170 100.0
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 2.0e-52 209.5 170 78.2
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 1.7e-51 206.5 179 69.8
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 1.8e-50 203.0 167 64.1
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 7.0e-50 201.1 169 77.5
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.6e-49 199.9 179 73.2
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 4.6e-49 198.4 167 74.3
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 7.8e-49 197.6 167 74.9
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 3.9e-48 195.3 175 74.3
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 6.6e-48 194.5 164 61.6
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 3.3e-47 192.2 168 58.3
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 3.3e-47 192.2 170 60.0
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 7.3e-47 191.0 178 68.5
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 9.5e-47 190.7 164 74.4
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 1.2e-46 190.3 170 62.4
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.1e-46 189.5 163 60.7
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 2.1e-46 189.5 167 60.5
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.7e-46 188.3 166 59.0
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.7e-46 188.3 170 69.4
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 8.0e-46 187.6 177 63.3
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 1.0e-45 187.2 171 57.9
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 1.0e-45 187.2 166 63.3
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.4e-45 186.8 176 70.5
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 1.8e-45 186.4 170 58.2
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 1.8e-45 186.4 170 69.4
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 2.3e-45 186.0 176 69.9
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 2.3e-45 186.0 176 69.9
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 2.3e-45 186.0 170 68.2
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 4.0e-45 185.3 170 72.9
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 6.8e-45 184.5 170 57.1
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 1.2e-44 183.7 170 55.9
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 2.0e-44 183.0 168 69.6
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 2.0e-44 183.0 151 76.8
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 2.6e-44 182.6 158 75.3
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 2.6e-44 182.6 164 74.4
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 4.4e-44 181.8 167 57.5
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 9.8e-44 180.6 167 64.1
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 9.8e-44 180.6 162 59.3
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 1.3e-43 180.3 170 56.5
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 2.2e-43 179.5 175 56.0
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 2.2e-43 179.5 180 56.1
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 2.9e-43 179.1 170 59.4
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 4.9e-43 178.3 169 68.0
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 6.4e-43 177.9 170 67.6
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 8.3e-43 177.6 173 56.1
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 1.1e-42 177.2 164 55.5
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 1.4e-42 176.8 185 53.0
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 1.4e-42 176.8 169 56.8
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 1.9e-42 176.4 169 55.6
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 7.0e-42 174.5 167 71.3
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.6e-41 173.3 176 55.1
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 4.6e-41 171.8 166 56.0
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 6.0e-41 171.4 164 53.7
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 6.0e-41 171.4 163 66.3
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 7.8e-41 171.0 165 67.3
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.3e-40 170.2 164 53.7
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 3.0e-40 169.1 178 53.9
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 3.9e-40 168.7 165 67.9
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 3.9e-40 168.7 168 54.8
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 5.0e-40 168.3 182 52.7
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 5.0e-40 168.3 176 50.6
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 6.6e-40 167.9 168 54.2
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 8.6e-40 167.5 163 72.4
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 8.6e-40 167.5 167 53.3
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.9e-39 166.4 169 52.7
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.9e-39 166.4 169 52.7
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 3.3e-39 165.6 162 71.0
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 5.6e-39 164.9 176 49.4
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 5.6e-39 164.9 169 69.2
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 1.2e-38 163.7 184 64.1
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 2.8e-38 162.5 171 64.9
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 4.7e-38 161.8 171 52.6
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.1e-37 160.6 170 53.5
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 1.4e-37 160.2 169 53.3
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 1.8e-37 159.8 132 64.4
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 2.3e-37 159.5 158 68.4
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 2.3e-37 159.5 167 49.7
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 5.2e-37 158.3 169 52.7
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 1.5e-36 156.8 177 61.6
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 5.8e-36 154.8 170 51.2
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 1.3e-35 153.7 169 53.3
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 1.7e-35 153.3 120 82.5
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 2.2e-35 152.9 167 63.5
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 6.4e-35 151.4 167 50.9
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 6.4e-35 151.4 240 40.4
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 1.4e-34 150.2 106 89.6
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 3.2e-34 149.1 174 60.3
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 3.2e-34 149.1 170 58.8
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.2e-33 147.1 164 48.8
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 2.1e-33 146.4 156 64.7
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 3.5e-33 145.6 172 46.5
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 6.0e-33 144.8 170 63.5
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 6.0e-33 144.8 102 66.7
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 7.8e-33 144.4 172 47.1
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 1.0e-32 144.1 171 46.2
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 2.3e-32 142.9 169 44.4
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 2.3e-32 142.9 169 44.4
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 2.3e-32 142.9 162 46.9
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 2.3e-32 142.9 163 47.2
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 3.0e-32 142.5 173 45.7
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 5.1e-32 141.7 169 43.8
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 5.1e-32 141.7 171 49.7
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 5.1e-32 141.7 121 59.5
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 6.6e-32 141.4 172 46.5
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 8.6e-32 141.0 172 44.8
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 8.6e-32 141.0 172 46.5
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 9.5e-31 137.5 170 45.3
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 3.6e-30 135.6 113 61.9
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 3.1e-29 132.5 188 46.3
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 6.8e-29 131.3 175 42.9
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 8.9e-29 131.0 169 43.2
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 1.5e-28 130.2 175 52.6
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 7.6e-28 127.9 106 62.3
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 1.7e-27 126.7 168 42.9
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 1.7e-27 126.7 106 80.2
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 3.8e-27 125.6 169 43.2
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 4.9e-27 125.2 106 80.2
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 2.4e-26 122.9 175 40.6
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 5.4e-26 121.7 112 58.9
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 6.0e-25 118.2 104 60.6
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 7.8e-25 117.9 138 50.0
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 2.3e-24 116.3 106 56.6
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 3.0e-24 115.9 93 66.7
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 5.1e-24 115.2 111 48.6
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 2.5e-23 112.8 107 56.1
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 1.2e-22 110.5 111 49.5
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 1.2e-20 104.0 174 36.2
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 1.1e-15 87.4 184 33.7
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 2.5e-15 86.3 80 58.8
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 9.6e-15 84.3 97 46.4
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 9.6e-15 84.3 103 41.7
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 9.6e-15 84.3 103 41.7
Actinidia31636 Actinidia chinensis HOM05D004876 ORTHO05D005488 2.8e-14 82.8 129 41.1
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 2.4e-13 79.7 164 31.1
TAR622G0554 Trochodendron aralioides HOM05D006000 ORTHO05D007749 7.6e-12 74.7 106 41.5
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 1.0e-08 64.3 73 50.7
Oeu039385.1 Olea europaea HOM05D002276 ORTHO05D002381 5.1e-08 62.0 66 90.9
Nitab4.5_0001671g0020 Nicotiana tabacum HOM05D004876 ORTHO05D005488 5.6e-07 58.5 64 45.3
Zm00001eb290470 Zea mays HOM05D004876 ORTHO05D005488 9.6e-07 57.8 61 44.3
TPR.G24777 Trifolium pratense HOM05D000029 ORTHO05D008675 8.1e-06 54.7 51 56.9


User provided reference genes

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