Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.0e-124 449.1 235 100.0
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 6.1e-44 181.8 147 63.9
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 2.7e-31 139.8 72 87.5
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 2.2e-30 136.7 74 85.1
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 8.5e-30 134.8 72 83.3
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.5e-29 134.0 74 81.1
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 1.5e-29 134.0 74 81.1
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 7.2e-29 131.7 74 79.7
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 9.5e-29 131.3 70 82.9
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 2.1e-28 130.2 66 87.9
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.7e-28 129.8 87 70.1
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 3.6e-28 129.4 69 84.1
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 4.7e-28 129.0 67 85.1
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 6.1e-28 128.6 70 82.9
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 6.1e-28 128.6 73 78.1
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 6.1e-28 128.6 68 83.8
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 6.1e-28 128.6 70 82.9
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 6.1e-28 128.6 68 85.3
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 8.0e-28 128.3 70 81.4
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.4e-27 127.5 72 79.2
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 1.8e-27 127.1 73 76.7
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 2.3e-27 126.7 69 84.1
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 2.3e-27 126.7 70 81.4
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 3.0e-27 126.3 65 86.2
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 5.2e-27 125.6 65 84.6
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 6.8e-27 125.2 73 76.7
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 6.8e-27 125.2 72 77.8
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 8.8e-27 124.8 65 84.6
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 8.8e-27 124.8 74 75.7
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 8.8e-27 124.8 74 74.3
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.2e-26 124.4 70 80.0
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.5e-26 124.0 67 80.6
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.0e-26 123.6 67 83.6
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 2.6e-26 123.2 69 78.3
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 2.6e-26 123.2 69 79.7
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 7.5e-26 121.7 73 74.0
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 9.8e-26 121.3 68 77.9
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 9.8e-26 121.3 65 81.5
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.3e-25 120.9 65 81.5
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.7e-25 120.6 66 84.8
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 2.2e-25 120.2 72 76.4
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 2.2e-25 120.2 72 76.4
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 2.2e-25 120.2 72 76.4
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 2.2e-25 120.2 67 77.6
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 2.2e-25 120.2 69 78.3
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.8e-25 119.8 69 75.4
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.8e-25 119.8 69 75.4
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 3.7e-25 119.4 68 79.4
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 3.7e-25 119.4 74 71.6
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 3.7e-25 119.4 71 76.1
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 4.9e-25 119.0 73 74.0
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 6.3e-25 118.6 69 76.8
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 8.3e-25 118.2 74 70.3
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.1e-24 117.9 73 76.7
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.1e-24 117.9 73 76.7
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.4e-24 117.5 71 76.1
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.8e-24 117.1 75 74.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.8e-24 117.1 70 74.3
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 1.8e-24 117.1 74 74.3
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.4e-24 116.7 64 79.7
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 2.4e-24 116.7 76 71.1
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 3.1e-24 116.3 68 76.5
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 3.1e-24 116.3 69 76.8
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 4.1e-24 115.9 65 80.0
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 4.1e-24 115.9 65 80.0
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 4.1e-24 115.9 64 78.1
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 4.1e-24 115.9 74 77.0
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 4.1e-24 115.9 74 74.3
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 4.1e-24 115.9 74 74.3
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 5.4e-24 115.5 74 73.0
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 5.4e-24 115.5 63 81.0
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 7.0e-24 115.2 73 74.0
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 7.0e-24 115.2 73 74.0
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.2e-23 114.4 76 69.7
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-23 114.4 76 69.7
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-23 114.4 76 69.7
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-23 114.4 76 69.7
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-23 114.4 72 73.6
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.6e-23 114.0 66 77.3
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 2.0e-23 113.6 69 75.4
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 2.7e-23 113.2 65 75.4
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 2.7e-23 113.2 65 75.4
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 2.7e-23 113.2 74 73.0
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 4.5e-23 112.5 64 81.2
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 1.0e-22 111.3 72 70.8
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.7e-22 110.5 74 67.6
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 2.3e-22 110.2 73 71.2
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 5.0e-22 109.0 73 69.9
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.6e-22 108.2 63 77.8
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.9e-21 107.1 69 72.5
Dinv35698 Davidia involucrata HOM05D007368 ORTHO05D009330 4.3e-21 105.9 82 69.5
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 4.7e-20 102.4 66 72.7
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 7.5e-18 95.1 101 46.5
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 9.8e-18 94.7 60 73.3
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 3.7e-17 92.8 59 72.9
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 2.4e-16 90.1 155 36.8
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.6e-15 87.4 50 74.0
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 5.0e-14 82.4 45 77.8
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-13 81.3 66 60.6
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 2.0e-10 70.5 60 51.7
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.4e-08 64.3 76 42.1
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 6.0e-07 58.9 61 39.3


User provided reference genes

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