Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 6.2e-144 514.2 281 100.0
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 5.9e-102 374.8 281 76.2
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 1.9e-84 316.6 281 66.5
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 4.5e-62 242.3 287 54.0
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 5.9e-62 241.9 294 55.4
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 2.5e-60 236.5 287 53.3
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.7e-53 213.8 308 46.4
Actinidia19731 Actinidia chinensis HOM05D004973 ORTHO05D006119 1.1e-52 211.1 284 53.5
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 1.1e-52 211.1 279 50.5
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 2.8e-51 206.5 303 48.2
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 8.0e-51 204.9 286 49.0
Lj3A975T70 Lonicera japonica HOM05D004973 ORTHO05D006119 5.8e-49 198.7 270 51.5
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 2.7e-46 189.9 288 48.3
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.0e-45 188.0 262 50.8
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 2.5e-44 183.3 294 46.9
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 9.5e-44 181.4 294 46.3
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 3.6e-43 179.5 287 46.3
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 6.2e-43 178.7 275 47.6
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 6.8e-42 175.3 266 44.7
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 3.4e-41 172.9 278 47.5
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 2.2e-40 170.2 292 45.9
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 1.1e-39 167.9 270 44.8
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 1.1e-39 167.9 264 47.0
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.9e-39 167.2 262 45.8
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 1.9e-39 167.2 266 44.4
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 9.2e-39 164.9 276 44.9
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 9.2e-39 164.9 263 45.2
vmacro20083 Vaccinium macrocarpon HOM05D004973 ORTHO05D006119 1.2e-38 164.5 283 45.9
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 2.7e-38 163.3 296 43.9
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 6.0e-38 162.2 284 46.1
HanXRQChr07g0195961 Helianthus annuus HOM05D004973 ORTHO05D006119 6.0e-38 162.2 288 39.2
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 6.0e-38 162.2 323 41.8
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.9e-37 159.5 292 44.2
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 3.9e-37 159.5 268 43.7
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 5.1e-37 159.1 335 38.8
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 6.6e-37 158.7 300 41.7
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 8.6e-37 158.3 291 40.2
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 1.1e-36 157.9 330 38.2
Lj2A104T80 Lonicera japonica HOM05D004973 ORTHO05D006119 1.1e-36 157.9 223 49.8
DCAR_017742 Daucus carota HOM05D004973 ORTHO05D006119 4.3e-36 156.0 293 40.3
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 7.3e-36 155.2 255 47.8
MSTRG.26739 Avicennia marina HOM05D004973 ORTHO05D006119 1.2e-35 154.5 322 38.2
Lsat_1_v5_gn_2_110141 Lactuca sativa HOM05D004973 ORTHO05D006119 1.6e-35 154.1 303 41.9
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 2.9e-32 143.3 268 42.9
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 2.9e-32 143.3 266 42.9
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 8.4e-32 141.7 279 42.3
SGA_v2.0_scaffold35G14182 Striga asiatica HOM05D004973 ORTHO05D006119 1.1e-31 141.4 292 39.0
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 7.1e-31 138.7 282 38.7
Nitab4.5_0007045g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 7.1e-31 138.7 227 44.5
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.2e-30 137.9 272 40.1
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 1.7e-29 134.0 266 41.0
MSTRG.19121 Avicennia marina HOM05D004973 ORTHO05D006119 2.3e-29 133.7 160 49.4
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 2.3e-29 133.7 272 38.6
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 2.3e-29 133.7 265 44.2
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 6.6e-29 132.1 295 38.0
Aqoxy4G03126 Aquilegia oxysepala HOM05D004973 ORTHO05D006119 3.3e-28 129.8 271 39.9
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 5.6e-28 129.0 270 40.7
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 5.6e-28 129.0 287 40.1
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 7.3e-28 128.6 284 35.9
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 1.6e-27 127.5 279 39.8
CAN.G867.2 Capsicum annuum HOM05D004973 ORTHO05D006119 2.8e-27 126.7 232 41.8
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 4.7e-27 125.9 272 40.1
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 6.2e-27 125.6 271 42.4
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.1e-26 124.8 228 45.2
RhsimUnG0120800 Rhododendron simsii HOM05D004973 ORTHO05D006119 1.1e-26 124.8 233 44.2
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 1.1e-26 124.8 189 49.2
DCAR_014954 Daucus carota HOM05D000267 ORTHO05D000298 4.0e-26 122.9 301 36.2
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 1.2e-25 121.3 281 35.2
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 7.6e-25 118.6 194 45.4
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 4.9e-24 115.9 273 39.2
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 6.4e-24 115.5 269 40.1
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 1.4e-23 114.4 251 39.0
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 5.4e-23 112.5 236 41.1
Phvul.007G161600 Phaseolus vulgaris HOM05D004973 ORTHO05D006119 9.3e-23 111.7 289 37.4
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 7.8e-22 108.6 291 37.5
MELO3C003079.2 Cucumis melo HOM05D004973 ORTHO05D006119 1.0e-21 108.2 271 35.1
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 3.0e-21 106.7 279 33.7
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 3.0e-21 106.7 119 53.8
CAN.G867.6 Capsicum annuum HOM05D004973 ORTHO05D006119 3.9e-21 106.3 268 36.6
Sc01g0003720 Simmondsia chinensis HOM05D004973 ORTHO05D006119 3.9e-21 106.3 273 37.7
THA.LOC104823441 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 3.9e-21 106.3 166 47.6
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 2.5e-20 103.6 279 33.3
PSO384G3176 Papaver somniferum HOM05D004973 ORTHO05D006119 3.3e-20 103.2 195 40.5
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 5.6e-20 102.4 323 31.3
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 1.3e-19 101.3 268 34.0
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 2.1e-19 100.5 273 36.3
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 2.8e-19 100.1 162 45.7
Eucgr.K03187 Eucalyptus grandis HOM05D004973 ORTHO05D006119 3.6e-19 99.8 270 38.5
MD04G1111000 Malus domestica HOM05D004973 ORTHO05D006119 3.1e-18 96.7 160 44.4
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 4.0e-18 96.3 116 50.0
A04p28480 Brassica napus HOM05D004973 ORTHO05D006119 1.2e-17 94.7 106 56.6
Thhalv10017275m.g Eutrema salsugineum HOM05D004973 ORTHO05D006119 3.4e-17 93.2 185 42.7
Sp4g19620 Schrenkiella parvula HOM05D004973 ORTHO05D006119 3.4e-17 93.2 96 58.3
A03p20600 Brassica napus HOM05D000861 ORTHO05D001799 2.9e-16 90.1 113 53.1
MBI05_g16176_MAGBIO Magnolia biondii HOM05D004973 ORTHO05D006119 2.9e-16 90.1 71 69.0
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 3.8e-16 89.7 115 51.3
CsaV3_3G035290 Cucumis sativus L. HOM05D004973 ORTHO05D006119 4.9e-16 89.4 272 35.3
Hund12070 Selenicereus undatus HOM05D004973 ORTHO05D006119 4.9e-16 89.4 269 34.6
Carub.0004s1921 Capsella rubella HOM05D004973 ORTHO05D006119 8.4e-16 88.6 106 51.9
Sed0023997 Sechium edule HOM05D004973 ORTHO05D006119 8.4e-16 88.6 87 57.5
TWI53G0396 Tripterygium wilfordii HOM05D004973 ORTHO05D006119 1.1e-15 88.2 128 48.4
BcaNung06611 Brassica carinata HOM05D004973 ORTHO05D006119 1.9e-15 87.4 156 42.9
C04p65800 Brassica napus HOM05D004973 ORTHO05D006119 1.9e-15 87.4 156 42.9
BolC4t28082H Brassica oleracea HOM05D004973 ORTHO05D006119 1.9e-15 87.4 156 42.9
AL4G33680 Arabidopsis lyrata HOM05D004973 ORTHO05D006119 2.4e-15 87.0 162 40.1
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 3.2e-15 86.7 229 36.2
BraA04t18326Z Brassica rapa HOM05D004973 ORTHO05D006119 9.3e-15 85.1 154 43.5
PGR004G2597 Punica granatum HOM05D004973 ORTHO05D006119 9.3e-15 85.1 113 46.9
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 2.1e-14 84.0 189 39.7
PGR004G0295 Punica granatum HOM05D004973 ORTHO05D006119 2.7e-14 83.6 272 34.2
MELO3C009296.2 Cucumis melo HOM05D004973 ORTHO05D006119 3.5e-14 83.2 272 33.5
Glyma.03G176000 Glycine max HOM05D004973 ORTHO05D006119 7.9e-14 82.0 170 41.2
BraA03t11302Z Brassica rapa HOM05D000861 ORTHO05D001799 1.8e-13 80.9 73 60.3
CAN.G608.34 Capsicum annuum HOM05D004973 ORTHO05D006119 1.8e-13 80.9 229 38.0
AT2G37300 Arabidopsis thaliana HOM05D004973 ORTHO05D006119 2.3e-13 80.5 196 38.3
EL10Ac7g17266 Beta vulgaris HOM05D004973 ORTHO05D006119 2.3e-13 80.5 270 31.9
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 3.9e-13 79.7 82 54.9
THA.LOC104805339 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 3.9e-13 79.7 188 41.5
RhsimUnG0120900 Rhododendron simsii HOM05D004973 ORTHO05D006119 1.1e-12 78.2 53 73.6
unitig_60.g25816 Utricularia gibba HOM05D004973 ORTHO05D006119 1.1e-12 78.2 258 32.6
C03p24200 Brassica napus HOM05D000861 ORTHO05D001799 2.5e-12 77.0 73 57.5
BolC3t14814H Brassica oleracea HOM05D004973 ORTHO05D006119 2.5e-12 77.0 73 57.5
A05p08610 Brassica napus HOM05D004973 ORTHO05D006119 3.3e-12 76.6 70 60.0
BcaC02g07519 Brassica carinata HOM05D004973 ORTHO05D006119 9.6e-12 75.1 73 58.9
Glyma.13G135200 Glycine max HOM05D004973 ORTHO05D006119 9.6e-12 75.1 235 35.3
C04p10700 Brassica napus HOM05D004973 ORTHO05D006119 1.3e-11 74.7 73 58.9
Os03g0283400 Oryza sativa ssp. japonica HOM05D004973 ORTHO05D006119 2.1e-11 73.9 300 31.0
Sed0025194 Sechium edule HOM05D004973 ORTHO05D006119 2.8e-11 73.6 271 30.3
VMungo1383G2298 Vigna mungo HOM05D004973 ORTHO05D006119 1.1e-10 71.6 169 37.9
arahy.Tifrunner.gnm1.ann1.X85SHR Arachis hypogaea HOM05D004973 ORTHO05D006119 2.4e-10 70.5 79 48.1
Zm00001eb012960 Zea mays HOM05D004973 ORTHO05D006119 3.1e-10 70.1 191 33.5
Ah.15g091990 Amaranthus hybridus HOM05D004973 ORTHO05D006119 4.0e-10 69.7 272 31.6
CARHR132290 Cardamine hirsuta HOM05D004973 ORTHO05D006119 4.0e-10 69.7 112 47.3
arahy.Tifrunner.gnm1.ann1.4HMS3J Arachis hypogaea HOM05D004973 ORTHO05D006119 6.9e-10 68.9 79 46.8
ClCG10G020720 Citrullus lanatus HOM05D004973 ORTHO05D006119 6.9e-10 68.9 273 32.2
PGSC0003DMG400018718 Solanum tuberosum HOM05D004973 ORTHO05D006119 6.9e-10 68.9 74 52.7
PGSC0003DMG400002023 Solanum tuberosum HOM05D004973 ORTHO05D006119 9.0e-10 68.6 83 48.2
HPP92_001696 Vanilla planifolia HOM05D004973 ORTHO05D006119 7.6e-09 65.5 254 29.9
Lalb_Chr02g0153461 Lupinus albus HOM05D004973 ORTHO05D006119 1.3e-08 64.7 255 32.5
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 9.3e-07 58.5 113 38.9
Sed0020255 Sechium edule HOM05D004973 ORTHO05D006119 9.3e-07 58.5 256 31.2
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 2.7e-06 57.0 109 33.0
Ca_11442_v3 Cicer arietinum L. HOM05D004973 ORTHO05D006119 3.5e-06 56.6 268 30.2


User provided reference genes

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