Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 4.8e-137 491.1 242 100.0
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 2.2e-89 332.8 227 71.4
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.8e-84 315.8 227 68.7
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.8e-84 315.8 227 68.7
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 5.8e-82 308.1 228 65.8
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 1.6e-79 300.1 230 64.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 3.0e-78 295.8 230 63.9
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 4.0e-75 285.4 227 61.2
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.4e-72 276.9 227 61.2
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 2.7e-71 272.7 233 57.9
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 3.5e-71 272.3 230 57.4
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 6.7e-70 268.1 233 59.2
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.9e-69 266.5 229 57.2
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 3.3e-69 265.8 229 59.4
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.3e-68 263.8 225 58.7
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 4.8e-68 261.9 230 59.6
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 1.2e-66 257.3 239 54.4
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 3.4e-66 255.8 232 59.5
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.3e-65 253.8 226 56.6
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 1.7e-65 253.4 223 58.3
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 2.1e-63 246.5 231 51.9
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.3e-62 243.8 230 56.5
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 3.0e-62 242.7 230 54.8
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 6.7e-62 241.5 233 51.9
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 6.7e-62 241.5 239 53.6
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.1e-61 240.7 233 53.6
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 3.3e-61 239.2 233 51.1
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 1.1e-59 234.2 257 48.6
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.1e-59 232.3 232 55.2
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 4.5e-58 228.8 230 52.2
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 1.7e-57 226.9 196 54.6
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 1.7e-57 226.9 230 51.3
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 2.9e-57 226.1 231 50.6
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 3.8e-57 225.7 198 55.1
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 6.5e-57 224.9 231 50.6
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 1.1e-56 224.2 231 50.2
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.4e-56 223.8 230 51.3
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 1.9e-56 223.4 197 52.8
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 2.5e-56 223.0 231 51.5
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 1.2e-55 220.7 229 50.2
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 1.6e-55 220.3 228 53.1
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 2.1e-55 219.9 231 51.5
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 2.7e-55 219.5 200 55.5
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.0e-54 217.6 234 44.9
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.0e-54 217.6 230 50.9
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 1.8e-54 216.9 230 50.4
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 2.3e-54 216.5 237 50.6
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 2.3e-54 216.5 230 50.4
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 8.7e-54 214.5 208 51.9
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 1.3e-52 210.7 224 49.1
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.6e-52 210.3 207 51.7
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 2.2e-52 209.9 209 50.2
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 3.7e-52 209.1 224 49.1
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 4.8e-52 208.8 241 48.5
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 4.8e-52 208.8 197 49.2
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 1.4e-51 207.2 164 56.1
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 1.8e-51 206.8 199 50.8
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.4e-51 206.5 241 47.7
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.1e-51 206.1 241 48.1
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.4e-50 202.6 239 48.1
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.0e-49 201.1 321 36.8
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.7e-49 200.3 239 44.4
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 2.2e-49 199.9 239 44.8
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 2.9e-49 199.5 238 44.5
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.9e-49 199.5 239 44.4
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.9e-49 199.5 241 46.9
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 2.9e-49 199.5 199 48.2
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.4e-48 197.2 199 46.2
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 4.2e-48 195.7 238 44.5
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 4.2e-48 195.7 228 48.7
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 5.5e-48 195.3 230 47.0
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 1.2e-47 194.1 211 48.3
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.6e-47 193.7 237 43.9
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.6e-47 193.7 251 42.6
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 2.1e-47 193.4 239 43.9
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 4.6e-47 192.2 221 46.6
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 6.1e-47 191.8 198 47.0
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 1.4e-46 190.7 231 45.5
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 1.8e-46 190.3 199 44.2
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 3.0e-46 189.5 257 44.4
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 3.9e-46 189.1 236 44.9
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 1.3e-44 184.1 245 42.0
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 3.1e-43 179.5 187 50.8
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 9.1e-43 177.9 232 42.2
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.7e-41 173.7 155 58.1
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.4e-38 164.1 241 39.8
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 8.8e-38 161.4 187 44.4
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 2.6e-37 159.8 207 42.5
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 4.4e-37 159.1 198 44.9
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.1e-35 154.5 210 41.9
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 4.1e-35 152.5 232 39.7
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 3.2e-32 142.9 230 39.6
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 2.6e-29 133.3 119 50.4
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 9.7e-29 131.3 85 71.8
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.9e-24 117.1 188 38.8
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 8.0e-23 111.7 163 41.1
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 1.4e-19 100.9 117 41.9
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 9.1e-19 98.2 123 37.4
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.7e-18 96.7 200 31.5
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 3.8e-17 92.8 155 40.6
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 5.5e-16 89.0 61 65.6
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.6e-15 86.3 94 45.7
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 2.3e-14 83.6 224 30.4
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 2.3e-14 83.6 184 30.4
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.8e-12 76.6 69 56.5
Oeu008469.1 Olea europaea HOM05D007171 ORTHO05D008946 5.4e-11 72.4 80 51.2


User provided reference genes

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