Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 0.0e+00 1254.6 690 100.0
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 1.4e-176 624.0 662 58.0
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 1.0e-131 474.9 688 46.2
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 7.3e-130 468.8 727 45.7
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 3.1e-120 436.8 789 40.6
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 3.3e-114 416.8 700 42.0
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 1.6e-113 414.5 700 41.9
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 5.3e-112 409.5 708 44.6
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 5.8e-103 379.4 744 37.5
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 2.8e-89 334.0 703 37.4
vmacro20136 Vaccinium macrocarpon HOM05D008555 ORTHO05D010760 3.4e-87 327.0 657 39.1
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 6.7e-83 312.8 691 37.5
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 4.5e-79 300.1 686 36.3
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 5.5e-77 293.1 687 35.2
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 1.4e-75 288.5 433 45.0
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 2.6e-74 284.3 420 44.8
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 3.7e-73 280.4 580 37.8
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 7.0e-72 276.2 451 40.1
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 5.9e-71 273.1 545 39.1
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 2.9e-70 270.8 788 34.0
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 8.5e-70 269.2 681 33.8
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 8.5e-70 269.2 438 42.2
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 1.2e-68 265.4 566 38.0
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 2.7e-68 264.2 547 38.0
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 6.1e-68 263.1 319 48.0
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 3.7e-65 253.8 542 36.7
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 4.8e-65 253.4 687 33.0
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 5.4e-64 250.0 661 33.3
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 2.5e-61 241.1 593 34.6
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 3.2e-61 240.7 320 45.6
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 6.1e-60 236.5 290 48.6
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 3.0e-59 234.2 568 34.5
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 4.4e-58 230.3 197 56.9
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 9.8e-58 229.2 285 47.0
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 1.4e-56 225.3 445 35.5
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.6e-52 211.8 461 35.4
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 1.2e-47 195.7 641 31.8
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.6e-47 195.3 653 30.2
Oeu024357.1 Olea europaea HOM05D008555 ORTHO05D010760 2.7e-47 194.5 548 33.9
PSO339G2550 Papaver somniferum HOM05D008555 ORTHO05D010760 3.0e-46 191.0 447 34.0
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 5.0e-46 190.3 436 33.7
PSO384G5088 Papaver somniferum HOM05D008555 ORTHO05D010760 3.3e-45 187.6 696 29.5
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 3.3e-37 161.0 157 54.8
Gorai.006G174100 Gossypium raimondii HOM05D008555 ORTHO05D010760 4.6e-31 140.6 457 32.2
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 7.1e-24 116.7 749 25.9
FAN14G0987 Fragaria x ananassa HOM05D008555 ORTHO05D010760 6.2e-12 77.0 221 33.0
Actinidia26453 Actinidia chinensis HOM05D056927 ORTHO05D038143 9.3e-08 63.2 64 53.1
Lalb_Chr23g0269691 Lupinus albus HOM05D001613 ORTHO05D001556 3.5e-07 61.2 141 24.1
VMungo1309G2316 Vigna mungo HOM05D008141 ORTHO05D008631 6.0e-07 60.5 200 25.5
FvH4_2g35340 Fragaria vesca HOM05D001613 ORTHO05D001556 1.3e-06 59.3 125 27.2
FAN15G0337 Fragaria x ananassa HOM05D001613 ORTHO05D001556 1.3e-06 59.3 125 27.2
FAN20G0144 Fragaria x ananassa HOM05D001613 ORTHO05D001556 1.3e-06 59.3 125 27.2
FAN27G0387 Fragaria x ananassa HOM05D001613 ORTHO05D001556 1.3e-06 59.3 125 27.2
RcHm_v2.0_Chr6g0306581 Rosa chinensis HOM05D001613 ORTHO05D001556 1.3e-06 59.3 125 27.2
ATR0705G197 Amborella trichopoda HOM05D001613 ORTHO05D001556 5.1e-06 57.4 124 29.8
arahy.Tifrunner.gnm1.ann1.4S52N9 Arachis hypogaea HOM05D001613 ORTHO05D001556 5.1e-06 57.4 122 25.4
Os09g0346900 Oryza sativa ssp. japonica HOM05D001613 ORTHO05D001556 5.1e-06 57.4 124 29.0
Phvul.009G111400 Phaseolus vulgaris HOM05D001613 ORTHO05D001556 5.1e-06 57.4 119 26.1
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 5.1e-06 57.4 162 29.0
Lj1g0013429 Lotus japonicus HOM05D001613 ORTHO05D001556 6.7e-06 57.0 120 26.7


User provided reference genes

Program Settings