Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37115 Davidia involucrata HOM05D006892 ORTHO05D008592 5.8e-42 173.7 82 100.0
Atru.chr8.2090 Acer truncatum HOM05D006892 ORTHO05D008592 7.4e-21 103.6 73 61.6
CSS0009632 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.3e-20 102.8 84 63.1
CSS0005500 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.6e-20 102.4 85 61.2
CSS0020330 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 2.8e-20 101.7 84 61.9
Haze_20883 Corylus avellana HOM05D006892 ORTHO05D008592 1.1e-19 99.8 80 56.2
Haze_20892 Corylus avellana HOM05D006892 ORTHO05D008592 1.1e-19 99.8 80 56.2
Gohir.D09G148100 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.1e-19 99.8 74 62.2
Gorai.006G169100 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.1e-19 99.8 74 62.2
Thecc.05G029200 Theobroma cacao HOM05D006892 ORTHO05D008592 1.1e-19 99.8 74 63.5
Gohir.A09G152400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.4e-19 99.4 74 62.2
CSS0014654 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 1.8e-19 99.0 81 59.3
Ciclev10013234m.g Citrus clementina HOM05D006892 ORTHO05D008592 1.8e-19 99.0 81 58.0
Lj1g0020029 Lotus japonicus HOM05D006892 ORTHO05D008592 3.1e-19 98.2 82 53.7
Dinv34454 Davidia involucrata HOM05D006892 ORTHO05D008592 5.3e-19 97.4 79 55.7
Lsat_1_v5_gn_9_32981 Lactuca sativa HOM05D006892 ORTHO05D008592 5.3e-19 97.4 80 50.0
GSVIVG01016437001 Vitis vinifera HOM05D006892 ORTHO05D008592 6.9e-19 97.1 74 62.2
FAN14G5964 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.5e-18 95.9 81 53.1
Glyma.07G139200 Glycine max HOM05D006892 ORTHO05D008592 1.5e-18 95.9 82 51.2
TAR636G2473 Trochodendron aralioides HOM05D006892 ORTHO05D008592 1.5e-18 95.9 69 62.3
Psat3g133520 Pisum sativum HOM05D006892 ORTHO05D008592 2.6e-18 95.1 75 58.7
Prupe.6G264500 Prunus persica HOM05D006892 ORTHO05D008592 2.6e-18 95.1 79 57.0
Lalb_Chr03g0042701 Lupinus albus HOM05D006892 ORTHO05D008592 4.5e-18 94.4 75 54.7
MD12G1154700 Malus domestica HOM05D006892 ORTHO05D008592 4.5e-18 94.4 74 58.1
FAN05G3252 Fragaria x ananassa HOM05D006892 ORTHO05D008592 5.8e-18 94.0 81 51.9
Glyma.01G105400 Glycine max HOM05D006892 ORTHO05D008592 5.8e-18 94.0 82 52.4
Lalb_Chr19g0125031 Lupinus albus HOM05D006892 ORTHO05D008592 5.8e-18 94.0 75 53.3
RcHm_v2.0_Chr3g0464651 Rosa chinensis HOM05D006892 ORTHO05D008592 5.8e-18 94.0 81 51.9
FvH4_6g12730 Fragaria vesca HOM05D006892 ORTHO05D008592 7.6e-18 93.6 81 51.9
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 7.6e-18 93.6 66 62.1
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 7.6e-18 93.6 66 62.1
TAR623G0452 Trochodendron aralioides HOM05D006892 ORTHO05D008592 7.6e-18 93.6 71 60.6
Glyma.04G105400 Glycine max HOM05D006892 ORTHO05D008592 1.0e-17 93.2 81 49.4
FAN09G3730 Fragaria x ananassa HOM05D006892 ORTHO05D008592 2.2e-17 92.0 81 50.6
Lj3g0005144 Lotus japonicus HOM05D006892 ORTHO05D008592 2.2e-17 92.0 71 59.2
Manes.08G082100 Manihot esculenta HOM05D006892 ORTHO05D008592 2.2e-17 92.0 72 56.9
TAR633G0729 Trochodendron aralioides HOM05D006892 ORTHO05D008592 2.2e-17 92.0 73 61.6
FAN02G3144 Fragaria x ananassa HOM05D006892 ORTHO05D008592 3.8e-17 91.3 81 49.4
Glyma.18G189800 Glycine max HOM05D006892 ORTHO05D008592 4.9e-17 90.9 73 53.4
Potri.010G196500 Populus trichocarpa HOM05D006892 ORTHO05D008592 4.9e-17 90.9 69 62.3
TPR.G34921 Trifolium pratense HOM05D006892 ORTHO05D008592 4.9e-17 90.9 82 51.2
Medtr7g065130 Medicago truncatula HOM05D006892 ORTHO05D008592 6.5e-17 90.5 75 53.3
CiPaw.10G149300 Carya illinoinensis HOM05D006892 ORTHO05D008592 1.1e-16 89.7 80 55.0
Glyma.03G073200 Glycine max HOM05D006892 ORTHO05D008592 1.1e-16 89.7 75 57.3
MD04G1138900 Malus domestica HOM05D006892 ORTHO05D008592 1.1e-16 89.7 71 59.2
Gohir.D04G125400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.9e-16 89.0 76 63.2
Gorai.012G108500 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.9e-16 89.0 76 63.2
MBI14_g02865_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.9e-16 89.0 68 57.4
Cc06_g02080 Coffea canephora HOM05D006892 ORTHO05D008592 3.2e-16 88.2 87 51.7
Phvul.008G114100 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 4.2e-16 87.8 82 53.7
Rhsim05G0199800 Rhododendron simsii HOM05D006892 ORTHO05D008592 4.2e-16 87.8 80 58.8
CiPaw.09G201300 Carya illinoinensis HOM05D006892 ORTHO05D008592 5.5e-16 87.4 76 57.9
Actinidia13165 Actinidia chinensis HOM05D006892 ORTHO05D008592 7.1e-16 87.0 82 52.4
MBI14_g02866_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 7.1e-16 87.0 58 60.3
Medtr4g019640 Medicago truncatula HOM05D006892 ORTHO05D008592 1.2e-15 86.3 76 52.6
Gohir.A04G085600 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.6e-15 85.9 56 73.2
COL.COLO4_14695 Corchorus olitorius HOM05D006892 ORTHO05D008592 2.1e-15 85.5 76 56.6
Phvul.010G009200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 2.1e-15 85.5 73 50.7
Potri.016G103900 Populus trichocarpa HOM05D006892 ORTHO05D008592 2.1e-15 85.5 57 61.4
Sabra08G0045200 Salix brachista HOM05D006892 ORTHO05D008592 2.1e-15 85.5 78 55.1
arahy.Tifrunner.gnm1.ann1.KB6CC9 Arachis hypogaea HOM05D006892 ORTHO05D008592 4.6e-15 84.3 56 60.7
arahy.Tifrunner.gnm1.ann1.KX701I Arachis hypogaea HOM05D006892 ORTHO05D008592 4.6e-15 84.3 56 60.7
Manes.09G098400 Manihot esculenta HOM05D006892 ORTHO05D008592 4.6e-15 84.3 82 51.2
Sabra06G0070000 Salix brachista HOM05D006892 ORTHO05D008592 4.6e-15 84.3 75 52.0
HanXRQChr05g0156901 Helianthus annuus HOM05D006892 ORTHO05D008592 6.0e-15 84.0 81 45.7
Potri.006G092300 Populus trichocarpa HOM05D006892 ORTHO05D008592 6.0e-15 84.0 80 51.2
arahy.Tifrunner.gnm1.ann1.71B432 Arachis hypogaea HOM05D006892 ORTHO05D008592 1.0e-14 83.2 70 52.9
arahy.Tifrunner.gnm1.ann1.AC77RP Arachis hypogaea HOM05D006892 ORTHO05D008592 1.0e-14 83.2 70 52.9
Ciclev10033223m.g Citrus clementina HOM05D006892 ORTHO05D008592 1.0e-14 83.2 78 51.3
Nn2g13528 Nelumbo nucifera HOM05D006892 ORTHO05D008592 3.9e-14 81.3 76 53.9
Eucgr.G02995 Eucalyptus grandis HOM05D006892 ORTHO05D008592 6.7e-14 80.5 67 56.7
TPR.G32561 Trifolium pratense HOM05D006892 ORTHO05D008592 8.7e-14 80.1 84 47.6
Haze_17148 Corylus avellana HOM05D000015 ORTHO05D000270 1.1e-13 79.7 67 58.2
MBI05_g02667_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.5e-13 79.3 55 60.0
CiPaw.01G293100 Carya illinoinensis HOM05D006892 ORTHO05D008592 2.5e-13 78.6 71 49.3
Haze_18710 Corylus avellana HOM05D006892 ORTHO05D008592 3.3e-13 78.2 76 52.6
Sabra10G0151100 Salix brachista HOM05D006892 ORTHO05D008592 3.3e-13 78.2 68 54.4
Eucgr.G02997 Eucalyptus grandis HOM05D006892 ORTHO05D008592 4.3e-13 77.8 80 50.0
CSS0011916 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 5.7e-13 77.4 76 55.3
Manes.07G122400 Manihot esculenta HOM05D006892 ORTHO05D008592 1.3e-12 76.3 54 57.4
Cfa001402 Carpinus fangiana HOM05D006892 ORTHO05D008592 2.1e-12 75.5 77 51.9
Psat7g241320 Pisum sativum HOM05D006892 ORTHO05D008592 2.1e-12 75.5 83 45.8
Cpa.g.sc56.60 Carica papaya HOM05D006892 ORTHO05D008592 3.7e-12 74.7 76 47.4
Atru.chr12.266 Acer truncatum HOM05D006892 ORTHO05D008592 4.8e-12 74.3 79 53.2
Haze_17150 Corylus avellana HOM05D006892 ORTHO05D008592 8.2e-12 73.6 78 50.0
Actinidia02903 Actinidia chinensis HOM05D006892 ORTHO05D008592 1.8e-11 72.4 78 47.4
Potri.008G061600 Populus trichocarpa HOM05D006892 ORTHO05D008592 4.0e-11 71.2 110 39.1
PGSC0003DMG400024270 Solanum tuberosum HOM05D006892 ORTHO05D008592 4.0e-11 71.2 70 47.1
COL.COLO4_36543 Corchorus olitorius HOM05D006892 ORTHO05D008592 5.3e-11 70.9 63 54.0
MBI14_g02869_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.9e-11 70.5 44 65.9
GSVIVG01034067001 Vitis vinifera HOM05D006892 ORTHO05D008592 6.9e-11 70.5 66 56.1
Manes.10G021300 Manihot esculenta HOM05D006892 ORTHO05D008592 9.0e-11 70.1 54 57.4
CAN.G697.1 Capsicum annuum HOM05D006892 ORTHO05D008592 1.5e-10 69.3 93 45.2
HanXRQChr08g0221291 Helianthus annuus HOM05D006892 ORTHO05D008592 2.0e-10 68.9 83 45.8
CDE02G2266 Ceratophyllum demersum HOM05D006892 ORTHO05D008592 5.8e-10 67.4 58 53.4
Sopen09g006180 Solanum pennellii HOM05D006892 ORTHO05D008592 1.0e-09 66.6 73 45.2
Gohir.A10G225300 Gossypium hirsutum HOM05D006892 ORTHO05D008592 3.8e-09 64.7 68 50.0
Gorai.011G273300 Gossypium raimondii HOM05D006892 ORTHO05D008592 5.0e-09 64.3 73 50.7
Phvul.001G238200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 5.0e-09 64.3 78 41.0
Glyma.18G033400 Glycine max HOM05D006892 ORTHO05D008592 6.5e-09 63.9 73 45.2
Thecc.10G031400 Theobroma cacao HOM05D006892 ORTHO05D008592 6.5e-09 63.9 41 68.3
TAR633G0009 Trochodendron aralioides HOM05D006892 ORTHO05D414936 1.4e-08 62.8 71 46.5
ClCG04G007580 Citrullus lanatus HOM05D006892 ORTHO05D008592 1.9e-08 62.4 84 40.5
Gohir.D10G238364 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.9e-08 62.4 69 50.7
Cpa.g.sc19.256 Carica papaya HOM05D006892 ORTHO05D008592 2.5e-08 62.0 74 44.6
Sed0015200 Sechium edule HOM05D006892 ORTHO05D008592 2.5e-08 62.0 41 58.5
Medtr3g069540 Medicago truncatula HOM05D006892 ORTHO05D008592 3.2e-08 61.6 35 65.7
MELO3C033485.2 Cucumis melo HOM05D006892 ORTHO05D008592 1.2e-07 59.7 84 38.1
DCAR_028810 Daucus carota HOM05D006892 ORTHO05D008592 1.6e-07 59.3 38 55.3
Sc07g0007010 Simmondsia chinensis HOM05D006892 ORTHO05D008592 2.7e-07 58.5 80 43.8
Sopen09g006190 Solanum pennellii HOM05D006892 ORTHO05D008592 2.7e-07 58.5 80 41.2
SalBow6G4181 Salvia bowleyana HOM05D061281 ORTHO05D008592 4.6e-07 57.8 68 42.6
SalBow6G4537 Salvia bowleyana HOM05D061281 ORTHO05D008592 4.6e-07 57.8 68 42.6
TPR.G33720 Trifolium pratense HOM05D006892 ORTHO05D008592 6.1e-07 57.4 78 41.0
HPP92_019858 Vanilla planifolia HOM05D006892 ORTHO05D008592 6.1e-07 57.4 52 42.3
Lj6g0007525 Lotus japonicus HOM05D006892 ORTHO05D008592 1.3e-06 56.2 74 41.9
Sopen03g027280 Solanum pennellii HOM05D006892 ORTHO05D008592 2.3e-06 55.5 35 54.3
arahy.Tifrunner.gnm1.ann1.J5YN7E Arachis hypogaea HOM05D006892 ORTHO05D008592 3.9e-06 54.7 77 44.2
arahy.Tifrunner.gnm1.ann1.F5D7CA Arachis hypogaea HOM05D006892 ORTHO05D008592 5.1e-06 54.3 77 42.9


User provided reference genes

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