Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv37042 Davidia involucrata HOM05D000976 ORTHO05D000847 4.6e-91 337.8 162 100.0
Dinv14557 Davidia involucrata HOM05D000976 ORTHO05D000847 6.7e-34 147.9 80 87.5
Hma1.2p1_0823F.1_g224670 Hydrangea macrophylla HOM05D000976 ORTHO05D000847 2.2e-32 142.9 81 82.7
CSS0049464 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 1.4e-31 140.2 81 82.7
GSVIVG01029902001 Vitis vinifera HOM05D000976 ORTHO05D000847 1.3e-29 133.7 103 65.0
vmacro07621 Vaccinium macrocarpon HOM05D000976 ORTHO05D000847 5.0e-29 131.7 81 74.1
Rhsim03G0044600 Rhododendron simsii HOM05D000976 ORTHO05D000847 1.1e-28 130.6 80 75.0
MELO3C019155.2 Cucumis melo HOM05D000976 ORTHO05D000847 7.2e-28 127.9 81 72.8
CsaV3_4G029090 Cucumis sativus L. HOM05D000976 ORTHO05D000847 7.2e-28 127.9 81 72.8
TAR623G1304 Trochodendron aralioides HOM05D000976 ORTHO05D000847 1.2e-27 127.1 81 76.5
Cfa019881 Carpinus fangiana HOM05D000976 ORTHO05D000847 3.6e-27 125.6 81 75.3
QL07p016023 Quercus lobata HOM05D000976 ORTHO05D000847 3.6e-27 125.6 81 76.5
CiPaw.10G124200 Carya illinoinensis HOM05D000976 ORTHO05D000847 4.7e-27 125.2 81 72.8
ClCG04G006020 Citrullus lanatus HOM05D000976 ORTHO05D000847 4.7e-27 125.2 81 71.6
Cc09_g05540 Coffea canephora HOM05D000976 ORTHO05D000847 8.0e-27 124.4 82 72.0
PGR042G3098 Punica granatum HOM05D000976 ORTHO05D000847 1.4e-26 123.6 80 68.8
RcHm_v2.0_Chr3g0495561 Rosa chinensis HOM05D000976 ORTHO05D000847 1.8e-26 123.2 82 73.2
Sed0015567 Sechium edule HOM05D000976 ORTHO05D000847 2.3e-26 122.9 82 73.2
Hund13308 Selenicereus undatus HOM05D000976 ORTHO05D000847 3.0e-26 122.5 82 70.7
Lj1g0011034 Lotus japonicus HOM05D000976 ORTHO05D000847 4.0e-26 122.1 80 70.0
FvH4_1g29390 Fragaria vesca HOM05D000976 ORTHO05D000847 5.2e-26 121.7 81 72.8
FAN28G2590 Fragaria x ananassa HOM05D000976 ORTHO05D000847 5.2e-26 121.7 81 72.8
Thecc.05G236900 Theobroma cacao HOM05D000976 ORTHO05D000847 6.7e-26 121.3 81 67.9
Atru.chr2.1602 Acer truncatum HOM05D000976 ORTHO05D000847 1.1e-25 120.6 81 69.1
Duzib106G0936 Durio zibethinus HOM05D000976 ORTHO05D000847 1.1e-25 120.6 81 67.9
FAN19G3159 Fragaria x ananassa HOM05D000976 ORTHO05D000847 1.5e-25 120.2 81 71.6
Nn3g19395 Nelumbo nucifera HOM05D000976 ORTHO05D000847 1.5e-25 120.2 142 47.2
Oeu044218.1 Olea europaea HOM05D000976 ORTHO05D000847 1.5e-25 120.2 81 69.1
Prupe.7G026000 Prunus persica HOM05D000976 ORTHO05D000847 2.0e-25 119.8 80 68.8
TPR.G20662 Trifolium pratense HOM05D000976 ORTHO05D000847 2.6e-25 119.4 80 65.0
FAN26G3358 Fragaria x ananassa HOM05D000976 ORTHO05D000847 3.3e-25 119.0 81 72.8
Oeu034907.1 Olea europaea HOM05D000976 ORTHO05D000847 3.3e-25 119.0 81 67.9
Glyma.03G005000 Glycine max HOM05D000976 ORTHO05D000847 4.4e-25 118.6 80 66.2
Lj2A413T17 Lonicera japonica HOM05D000976 ORTHO05D000847 4.4e-25 118.6 83 68.7
Lalb_Chr14g0365061 Lupinus albus HOM05D000976 ORTHO05D000847 5.7e-25 118.2 79 67.1
MD12G1014800 Malus domestica HOM05D000976 ORTHO05D000847 7.5e-25 117.9 80 70.0
Medtr7g087440 Medicago truncatula HOM05D000976 ORTHO05D000847 9.7e-25 117.5 80 65.0
Phvul.001G103100 Phaseolus vulgaris HOM05D000976 ORTHO05D000847 1.3e-24 117.1 80 63.8
VMungo1383G3548 Vigna mungo HOM05D000976 ORTHO05D000847 1.3e-24 117.1 80 65.0
Potri.013G069000 Populus trichocarpa HOM05D000976 ORTHO05D000847 1.7e-24 116.7 81 67.9
TWI32G0779 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 1.7e-24 116.7 82 67.1
Lalb_Chr24g0401221 Lupinus albus HOM05D000976 ORTHO05D000847 2.8e-24 115.9 79 67.1
Psat3g084600 Pisum sativum HOM05D000976 ORTHO05D000847 2.8e-24 115.9 80 65.0
Sabra13G0059900 Salix brachista HOM05D000976 ORTHO05D000847 3.7e-24 115.5 82 72.0
MD14G1012400 Malus domestica HOM05D000976 ORTHO05D000847 8.2e-24 114.4 80 67.5
SalBow1G0965 Salvia bowleyana HOM05D000976 ORTHO05D000847 8.2e-24 114.4 82 63.4
TWI34G0389 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 8.2e-24 114.4 80 67.5
Ca_03433_v3 Cicer arietinum L. HOM05D000976 ORTHO05D000847 1.4e-23 113.6 80 63.8
Eucgr.A02161 Eucalyptus grandis HOM05D000976 ORTHO05D000847 1.4e-23 113.6 79 68.4
Glyma.19G121000 Glycine max HOM05D000976 ORTHO05D000847 1.4e-23 113.6 80 62.5
Gohir.D13G165300 Gossypium hirsutum HOM05D000976 ORTHO05D000847 3.1e-23 112.5 77 66.2
Gorai.013G197400 Gossypium raimondii HOM05D000976 ORTHO05D000847 3.1e-23 112.5 77 66.2
Nitab4.5_0000062g0580 Nicotiana tabacum HOM05D000976 ORTHO05D000847 4.1e-23 112.1 125 50.4
Aa31LG5G14120 Aethionema arabicum HOM05D000976 ORTHO05D000847 9.1e-23 110.9 89 57.3
Sc07g0007730 Simmondsia chinensis HOM05D000976 ORTHO05D000847 9.1e-23 110.9 81 65.4
Sc07g0007760 Simmondsia chinensis HOM05D000976 ORTHO05D000847 9.1e-23 110.9 81 65.4
THA.LOC104802887 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 1.2e-22 110.5 83 59.0
AL3G13380 Arabidopsis lyrata HOM05D000976 ORTHO05D000847 1.6e-22 110.2 86 57.0
Carub.0003s0277 Capsella rubella HOM05D000976 ORTHO05D000847 1.6e-22 110.2 86 57.0
PSO384G1114 Papaver somniferum HOM05D000976 ORTHO05D000847 1.6e-22 110.2 80 63.8
DCAR_013501 Daucus carota HOM05D000976 ORTHO05D000847 2.0e-22 109.8 81 64.2
Nitab4.5_0010533g0020 Nicotiana tabacum HOM05D000976 ORTHO05D000847 2.0e-22 109.8 125 49.6
Manes.08G155500 Manihot esculenta HOM05D000976 ORTHO05D000847 2.7e-22 109.4 81 61.7
CANSAT01G0258 Cannabis sativa HOM05D000976 ORTHO05D000847 5.9e-22 108.2 80 66.2
Gohir.A13G160100 Gossypium hirsutum HOM05D000976 ORTHO05D000847 5.9e-22 108.2 77 64.9
Sp3g02600 Schrenkiella parvula HOM05D000976 ORTHO05D000847 5.9e-22 108.2 84 57.1
AT3G03610 Arabidopsis thaliana HOM05D000976 ORTHO05D000847 7.7e-22 107.8 86 55.8
PSO339G5356 Papaver somniferum HOM05D000976 ORTHO05D000847 7.7e-22 107.8 81 61.7
BcaC05g30263 Brassica carinata HOM05D000976 ORTHO05D000847 1.0e-21 107.5 84 54.8
Migut.K00187 Erythranthe guttata HOM05D000976 ORTHO05D000847 1.3e-21 107.1 82 62.2
THA.LOC104820808 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 1.3e-21 107.1 84 59.5
A05p43700 Brassica napus HOM05D000976 ORTHO05D000847 1.7e-21 106.7 84 56.0
BraA05t23109Z Brassica rapa HOM05D000976 ORTHO05D000847 1.7e-21 106.7 84 56.0
Thhalv10021157m.g Eutrema salsugineum HOM05D000976 ORTHO05D000847 1.7e-21 106.7 84 56.0
Peaxi162Scf00153g00079 Petunia axillaris HOM05D000976 ORTHO05D000847 1.7e-21 106.7 125 48.0
CARHR077650 Cardamine hirsuta HOM05D000976 ORTHO05D000847 2.2e-21 106.3 86 55.8
MSTRG.26198 Avicennia marina HOM05D000976 ORTHO05D000847 2.9e-21 105.9 82 58.5
C05p63280 Brassica napus HOM05D000976 ORTHO05D000847 5.0e-21 105.1 84 54.8
BolC5t34991H Brassica oleracea HOM05D000976 ORTHO05D000847 5.0e-21 105.1 84 54.8
CAN.G128.117 Capsicum annuum HOM05D000976 ORTHO05D000847 6.5e-21 104.8 124 49.2
PGSC0003DMG400028206 Solanum tuberosum HOM05D000976 ORTHO05D000847 6.5e-21 104.8 124 49.2
COL.COLO4_33465 Corchorus olitorius HOM05D000976 ORTHO05D000847 8.5e-21 104.4 81 60.5
Duzib177G1033 Durio zibethinus HOM05D000976 ORTHO05D000847 8.5e-21 104.4 81 61.7
BcaC05g29866 Brassica carinata HOM05D000976 ORTHO05D000847 1.1e-20 104.0 84 53.6
Ah.12g062090 Amaranthus hybridus HOM05D000976 ORTHO05D000847 1.5e-20 103.6 79 62.0
BcaNung05457 Brassica carinata HOM05D000976 ORTHO05D000847 3.2e-20 102.4 86 54.7
Solyc10g081270.2 Solanum lycopersicum HOM05D000976 ORTHO05D000847 3.2e-20 102.4 124 48.4
Sopen10g031770 Solanum pennellii HOM05D000976 ORTHO05D000847 3.2e-20 102.4 124 48.4
SGA_v2.0_scaffold240G44155 Striga asiatica HOM05D000976 ORTHO05D000847 3.2e-20 102.4 85 57.6
unitig_0.g2670 Utricularia gibba HOM05D000976 ORTHO05D000847 3.2e-20 102.4 83 57.8
Ciclev10032130m.g Citrus clementina HOM05D000976 ORTHO05D000847 4.2e-20 102.1 82 58.5
MBI19_g13595_MAGBIO Magnolia biondii HOM05D000976 ORTHO05D000847 4.2e-20 102.1 84 61.9
BcaC09g47720 Brassica carinata HOM05D000976 ORTHO05D000847 5.5e-20 101.7 86 55.8
BNapus_Darmor_BZH_scaffold_162p00230 Brassica napus HOM05D000976 ORTHO05D000847 5.5e-20 101.7 86 55.8
BolC1t05823H Brassica oleracea HOM05D000976 ORTHO05D000847 5.5e-20 101.7 86 55.8
arahy.Tifrunner.gnm1.ann1.QWRQ1F Arachis hypogaea HOM05D000976 ORTHO05D000847 7.2e-20 101.3 79 62.0
ECA248G1781 Erigeron canadensis HOM05D000976 ORTHO05D000847 7.2e-20 101.3 84 58.3
Lsat_1_v5_gn_5_154440 Lactuca sativa HOM05D000976 ORTHO05D000847 9.4e-20 100.9 84 56.0
unitig_748.g7219 Utricularia gibba HOM05D000976 ORTHO05D000847 1.2e-19 100.5 82 59.8
arahy.Tifrunner.gnm1.ann1.2J433J Arachis hypogaea HOM05D000976 ORTHO05D000847 4.7e-19 98.6 79 60.8
A01p41500 Brassica napus HOM05D000976 ORTHO05D000847 6.1e-19 98.2 87 54.0
BNapus_Darmor_BZH_scaffold_78p00210 Brassica napus HOM05D000976 ORTHO05D000847 6.1e-19 98.2 87 54.0
BraA01t04573Z Brassica rapa HOM05D000976 ORTHO05D000847 6.1e-19 98.2 89 52.8
AUR62037075 Chenopodium quinoa HOM05D000976 ORTHO05D000847 8.0e-19 97.8 80 60.0
EL10Ac5g11647 Beta vulgaris HOM05D000976 ORTHO05D000847 1.8e-18 96.7 81 56.8
AUR62036495 Chenopodium quinoa HOM05D000976 ORTHO05D000847 1.8e-18 96.7 80 58.8
Os03g0322800 Oryza sativa ssp. japonica HOM05D000976 ORTHO05D000847 1.8e-18 96.7 83 53.0
Zm00001eb015380 Zea mays HOM05D000976 ORTHO05D000847 1.2e-17 94.0 111 42.3
HanXRQChr13g0406461 Helianthus annuus HOM05D000976 ORTHO05D000847 4.8e-16 88.6 84 51.2
Manes.09G134700 Manihot esculenta HOM05D000976 ORTHO05D000847 8.3e-16 87.8 83 54.2
SEGI_04579 Sequoiadendron giganteum HOM05D000976 ORTHO05D000847 3.5e-14 82.4 80 51.2
Gohir.D11G238300 Gossypium hirsutum HOM05D000976 ORTHO05D000847 1.3e-13 80.5 82 52.4
AagrBONN_evm.TU.Sc2ySwM_117.56 Anthoceros agrestis HOM05D000976 ORTHO05D000847 5.0e-13 78.6 83 48.2
Gorai.007G252300 Gossypium raimondii HOM05D000976 ORTHO05D000847 8.5e-13 77.8 82 51.2
SMO364G0853 Selaginella moellendorffii HOM05D000976 ORTHO05D000847 1.5e-12 77.0 75 50.7
Actinidia37842 Actinidia chinensis HOM05D000976 ORTHO05D000847 5.5e-12 75.1 39 79.5
Pp3c9_8380 Physcomitrium patens HOM05D000976 ORTHO05D000847 1.6e-11 73.6 74 50.0
CDE04G2741 Ceratophyllum demersum HOM05D000976 ORTHO05D000847 2.1e-11 73.2 84 50.0
CSS0003517 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 4.7e-11 72.0 80 53.8
CSS0038350 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 4.7e-11 72.0 80 53.8
CSS0038793 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 4.7e-11 72.0 80 53.8
CSS0050151 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 4.7e-11 72.0 80 53.8
Mapoly0037s0066 Marchantia polymorpha HOM05D000976 ORTHO05D000847 1.5e-09 67.0 100 43.0
ATR0307G076 Amborella trichopoda HOM05D000976 ORTHO05D000847 2.2e-08 63.2 54 55.6


User provided reference genes

Program Settings