Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 4.7e-52 207.6 106 100.0
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 3.0e-30 135.2 73 94.5
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 3.0e-30 135.2 73 94.5
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 3.0e-30 135.2 73 93.2
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 3.9e-30 134.8 72 94.4
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 8.6e-30 133.7 73 94.5
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 1.9e-29 132.5 73 93.2
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 2.5e-29 132.1 73 93.2
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 2.5e-29 132.1 73 93.2
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 2.5e-29 132.1 73 93.2
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 2.5e-29 132.1 73 93.2
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 3.3e-29 131.7 74 90.5
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 93.2
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 91.8
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 3.3e-29 131.7 73 91.8
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 4.3e-29 131.3 73 91.8
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 5.6e-29 131.0 73 91.8
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 5.6e-29 131.0 73 91.8
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 5.6e-29 131.0 73 91.8
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 5.6e-29 131.0 73 91.8
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 5.6e-29 131.0 73 91.8
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 5.6e-29 131.0 73 91.8
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 7.3e-29 130.6 73 91.8
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 7.3e-29 130.6 73 91.8
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 7.3e-29 130.6 73 91.8
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 9.5e-29 130.2 73 91.8
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 1.2e-28 129.8 73 89.0
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 1.2e-28 129.8 73 91.8
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 1.2e-28 129.8 73 91.8
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 1.2e-28 129.8 73 90.4
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.6e-28 129.4 73 90.4
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.6e-28 129.4 73 91.8
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.6e-28 129.4 73 91.8
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 1.6e-28 129.4 73 91.8
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 2.1e-28 129.0 73 90.4
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 2.1e-28 129.0 73 90.4
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 2.1e-28 129.0 73 91.8
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 3.6e-28 128.3 73 87.7
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 3.6e-28 128.3 73 90.4
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 4.7e-28 127.9 81 84.0
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 6.2e-28 127.5 73 89.0
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 8.0e-28 127.1 73 89.0
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.0e-27 126.7 73 87.7
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.0e-27 126.7 73 87.7
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.0e-27 126.7 73 87.7
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.0e-27 126.7 73 87.7
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.0e-27 126.7 73 87.7
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 1.4e-27 126.3 72 88.9
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 1.8e-27 125.9 72 88.9
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 1.8e-27 125.9 73 86.3
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.8e-27 125.9 72 88.9
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 3.1e-27 125.2 85 78.8
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 3.1e-27 125.2 73 86.3
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 6.8e-27 124.0 69 89.9
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 6.8e-27 124.0 73 84.9
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 1.2e-26 123.2 75 85.3
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 2.0e-26 122.5 75 85.3
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 2.0e-26 122.5 75 85.3
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 2.6e-26 122.1 74 86.5
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 2.6e-26 122.1 74 86.5
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 2.6e-26 122.1 74 86.5
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 2.6e-26 122.1 74 86.5
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 2.6e-26 122.1 74 86.5
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 5.8e-26 120.9 73 82.2
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 6.4e-25 117.5 73 82.2
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 8.3e-25 117.1 73 83.6
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 2.4e-24 115.5 80 76.2
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 9.2e-24 113.6 57 96.5
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 3.9e-22 108.2 73 80.8
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 8.6e-22 107.1 73 79.5
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 8.6e-22 107.1 73 79.5
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 8.6e-22 107.1 73 79.5
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 8.6e-22 107.1 73 79.5
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 1.5e-21 106.3 73 79.5
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 1.9e-21 105.9 75 80.0
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 3.6e-20 101.7 72 75.0
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 3.6e-20 101.7 72 75.0
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 3.6e-20 101.7 61 80.3
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 1.4e-19 99.8 63 77.8
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 7.5e-18 94.0 80 63.8
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 2.9e-17 92.0 67 67.2
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 1.4e-16 89.7 66 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 4.1e-16 88.2 66 62.1
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 4.1e-16 88.2 64 73.4
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 6.0e-15 84.3 44 90.9
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 1.5e-13 79.7 63 57.1
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 2.5e-13 79.0 44 86.4
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 2.5e-13 79.0 73 65.8
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 7.3e-13 77.4 46 78.3
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.9e-09 65.5 38 89.5
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 4.6e-07 58.2 54 46.3
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 7.8e-07 57.4 33 81.8


User provided reference genes

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